RNA–Protein interactions for RNA: ENST00000513321.1

NEIL3-202, Transcript of nei like DNA glycosylase 3, humanhuman

TSL 1 (best)

Gene NEIL3, Length 1,528 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL3-202ENST00000513321 NISCHQ9Y2I1 1504 aa50.19■■■■■ 5.62
NEIL3-202ENST00000513321 CCDC180Q9P1Z9 1646 aa44.33■■■■■ 4.69
NEIL3-202ENST00000513321 ABCC9O60706 1549 aa43.13■■■■■ 4.49
NEIL3-202ENST00000513321 DCAF8L2P0C7V8 631 aa41.94■■■■■ 4.3
NEIL3-202ENST00000513321 ZCCHC6Q5VYS8 1495 aaKnown RBP41.87■■■■■ 4.29
NEIL3-202ENST00000513321 NACADO15069 1562 aa41.65■■■■■ 4.26
NEIL3-202ENST00000513321 RB1CC1Q8TDY2 1594 aa41.59■■■■■ 4.25
NEIL3-202ENST00000513321 MYO15BQ96JP2 1530 aa41.51■■■■■ 4.24
NEIL3-202ENST00000513321 DCAF1Q9Y4B6 1507 aa41.5■■■■■ 4.23
NEIL3-202ENST00000513321 UNC13AQ9UPW8 1703 aa40.59■■■■■ 4.09
NEIL3-202ENST00000513321 SCRIBQ14160 1630 aa40.57■■■■■ 4.08
NEIL3-202ENST00000513321 PABPN1Q86U42 306 aaKnown RBP eCLIP40.45■■■■■ 4.07
NEIL3-202ENST00000513321 BICRAQ9NZM4 1560 aa40.33■■■■■ 4.05
NEIL3-202ENST00000513321 SHROOM4Q9ULL8 1493 aa39.99■■■■□ 3.99
NEIL3-202ENST00000513321 DNAJC5BQ9UF47 199 aa39.29■■■■□ 3.88
NEIL3-202ENST00000513321 EIF4G1Q04637 1599 aaKnown RBP39.23■■■■□ 3.87
NEIL3-202ENST00000513321 CECR2Q9BXF3 1484 aa39.1■■■■□ 3.85
NEIL3-202ENST00000513321 CC2D2AQ9P2K1 1620 aa38.97■■■■□ 3.83
NEIL3-202ENST00000513321 BAZ1AQ9NRL2 1556 aaPredicted RBP38.84■■■■□ 3.81
NEIL3-202ENST00000513321 SMARCA4P51532 1647 aa38.81■■■■□ 3.8
NEIL3-202ENST00000513321 MROH2BQ7Z745 1585 aa38.71■■■■□ 3.79
NEIL3-202ENST00000513321 ATAD2BQ9ULI0 1458 aa38.56■■■■□ 3.76
NEIL3-202ENST00000513321 SMARCA2P51531 1590 aa38.49■■■■□ 3.75
NEIL3-202ENST00000513321 NCAPD3P42695 1498 aa38.47■■■■□ 3.75
NEIL3-202ENST00000513321 RSF1Q96T23 1441 aaPredicted RBP38.44■■■■□ 3.74
NEIL3-202ENST00000513321 PEG3Q9GZU2 1588 aa38.42■■■■□ 3.74
NEIL3-202ENST00000513321 WIZO95785 1651 aa38.28■■■■□ 3.72
NEIL3-202ENST00000513321 HMGXB3Q12766 1538 aa38.26■■■■□ 3.71
NEIL3-202ENST00000513321 BAZ1BQ9UIG0 1483 aaKnown RBP38.25■■■■□ 3.71
NEIL3-202ENST00000513321 SUPT5HO00267 1087 aaKnown RBP37.88■■■■□ 3.65
NEIL3-202ENST00000513321 TOP2AP11388 1531 aaKnown RBP37.88■■■■□ 3.65
NEIL3-202ENST00000513321 CCDC88BA6NC98 1476 aa37.5■■■■□ 3.59
NEIL3-202ENST00000513321 NESP48681 1621 aa37.44■■■■□ 3.58
NEIL3-202ENST00000513321 CADPSQ9ULU8 1353 aa37.4■■■■□ 3.58
NEIL3-202ENST00000513321 LAMC3Q9Y6N6 1575 aa37.33■■■■□ 3.57
NEIL3-202ENST00000513321 CFTRP13569 1480 aa37.23■■■■□ 3.55
NEIL3-202ENST00000513321 PDS5BQ9NTI5 1447 aa37.13■■■■□ 3.54
NEIL3-202ENST00000513321 ERCC6Q03468 1493 aa37.13■■■■□ 3.53
NEIL3-202ENST00000513321 FANCD2Q9BXW9 1451 aa36.94■■■■□ 3.5
NEIL3-202ENST00000513321 KIF21AQ7Z4S6 1674 aa36.92■■■■□ 3.5
NEIL3-202ENST00000513321 CEP164Q9UPV0 1460 aa36.84■■■■□ 3.49
NEIL3-202ENST00000513321 PRDM2Q13029 1718 aa36.84■■■■□ 3.49
NEIL3-202ENST00000513321 MRC2Q9UBG0 1479 aa36.7■■■■□ 3.47
NEIL3-202ENST00000513321 THOC2Q8NI27 1593 aaKnown RBP36.69■■■■□ 3.46
NEIL3-202ENST00000513321 URB2Q14146 1524 aaKnown RBP36.54■■■■□ 3.44
NEIL3-202ENST00000513321 CUX2O14529 1486 aa36.53■■■■□ 3.44
NEIL3-202ENST00000513321 WDR62O43379 1518 aa36.53■■■■□ 3.44
NEIL3-202ENST00000513321 ABCC8Q09428 1581 aa36.41■■■■□ 3.42
NEIL3-202ENST00000513321 TOPBP1Q92547 1522 aa36.39■■■■□ 3.42
NEIL3-202ENST00000513321 DNMBPQ6XZF7 1577 aa36.35■■■■□ 3.41
NEIL3-202ENST00000513321 CUX1P39880 1505 aa36.27■■■■□ 3.4
NEIL3-202ENST00000513321 WRNQ14191 1432 aaPredicted RBP eCLIP36.22■■■■□ 3.39
NEIL3-202ENST00000513321 POLA1P09884 1462 aaPredicted RBP36.11■■■■□ 3.37
NEIL3-202ENST00000513321 FGD5Q6ZNL6 1462 aa36.08■■■■□ 3.37
NEIL3-202ENST00000513321 SYNJ1O43426 1573 aa36.06■■■■□ 3.36
NEIL3-202ENST00000513321 IFT140Q96RY7 1462 aa36.06■■■■□ 3.36
NEIL3-202ENST00000513321 TOP2BQ02880 1626 aa36.03■■■■□ 3.36
NEIL3-202ENST00000513321 SOGA1O94964 1423 aa36.03■■■■□ 3.36
NEIL3-202ENST00000513321 BIVM-ERCC5R4GMW8 1640 aa36■■■■□ 3.35
NEIL3-202ENST00000513321 RAD54L2Q9Y4B4 1467 aa35.99■■■■□ 3.35
NEIL3-202ENST00000513321 TARBP1Q13395 1621 aaKnown RBP35.94■■■■□ 3.34
NEIL3-202ENST00000513321 ZNF608Q9ULD9 1512 aaPredicted RBP35.89■■■■□ 3.34
NEIL3-202ENST00000513321 TDRD9Q8NDG6 1382 aaKnown RBP35.79■■■■□ 3.32
NEIL3-202ENST00000513321 AQRO60306 1485 aaKnown RBP eCLIP35.77■■■■□ 3.32
NEIL3-202ENST00000513321 ABCA10Q8WWZ4 1543 aa35.75■■■■□ 3.31
NEIL3-202ENST00000513321 TRIM41Q8WV44 630 aa35.74■■■■□ 3.31
NEIL3-202ENST00000513321 EIF4G3O43432 1585 aaKnown RBP35.69■■■■□ 3.3
NEIL3-202ENST00000513321 WDR97A6NE52 1622 aa35.67■■■■□ 3.3
NEIL3-202ENST00000513321 GAPVD1Q14C86 1478 aa35.59■■■■□ 3.29
NEIL3-202ENST00000513321 CHIC1Q5VXU3 224 aa35.57■■■■□ 3.29
NEIL3-202ENST00000513321 ABCA5Q8WWZ7 1642 aa35.52■■■■□ 3.28
NEIL3-202ENST00000513321 GRIN2BQ13224 1484 aa35.51■■■■□ 3.28
NEIL3-202ENST00000513321 KIF27Q86VH2 1401 aa35.44■■■■□ 3.26
NEIL3-202ENST00000513321 SNAPC4Q5SXM2 1469 aa35.4■■■■□ 3.26
NEIL3-202ENST00000513321 PBRM1Q86U86 1689 aa35.38■■■■□ 3.25
NEIL3-202ENST00000513321 MAGI1Q96QZ7 1491 aaPredicted RBP35.35■■■■□ 3.25
NEIL3-202ENST00000513321 FBLN2P98095 1184 aa35.32■■■■□ 3.25
NEIL3-202ENST00000513321 ERICH3Q5RHP9 1530 aa35.31■■■■□ 3.24
NEIL3-202ENST00000513321 IGF1RP08069 1367 aa35.28■■■■□ 3.24
NEIL3-202ENST00000513321 RUSC2Q8N2Y8 1516 aa35.27■■■■□ 3.24
NEIL3-202ENST00000513321 CHMP7Q8WUX9 453 aaPredicted RBP35.27■■■■□ 3.24
NEIL3-202ENST00000513321 SYNJ2O15056 1496 aa35.22■■■■□ 3.23
NEIL3-202ENST00000513321 OSCARQ8IYS5 282 aa35.22■■■■□ 3.23
NEIL3-202ENST00000513321 FHAD1B1AJZ9 1412 aa35.18■■■■□ 3.22
NEIL3-202ENST00000513321 ADAMTS12P58397 1594 aa35.15■■■■□ 3.22
NEIL3-202ENST00000513321 CHD1O14646 1710 aa35.14■■■■□ 3.22
NEIL3-202ENST00000513321 CARMIL1Q5VZK9 1371 aa35.07■■■■□ 3.21
NEIL3-202ENST00000513321 GRIN2AQ12879 1464 aa35.04■■■■□ 3.2
NEIL3-202ENST00000513321 DNAJC5Q9H3Z4 198 aa35.04■■■■□ 3.2
NEIL3-202ENST00000513321 CUL7Q14999 1698 aa35.03■■■■□ 3.2
NEIL3-202ENST00000513321 FAM9AQ8IZU1 332 aaPredicted RBP35.01■■■■□ 3.2
NEIL3-202ENST00000513321 EEA1Q15075 1411 aa35■■■■□ 3.19
NEIL3-202ENST00000513321 CSRNP3Q8WYN3 585 aa35■■■■□ 3.19
NEIL3-202ENST00000513321 RAPGEF2Q9Y4G8 1499 aa34.87■■■■□ 3.17
NEIL3-202ENST00000513321 NUP160Q12769 1436 aa34.87■■■■□ 3.17
NEIL3-202ENST00000513321 PRXQ9BXM0 1461 aa34.85■■■■□ 3.17
NEIL3-202ENST00000513321 CEP170Q5SW79 1584 aa34.83■■■■□ 3.17
NEIL3-202ENST00000513321 CLASP1Q7Z460 1538 aa34.8■■■■□ 3.16
NEIL3-202ENST00000513321 KIAA0586Q9BVV6 1533 aa34.66■■■■□ 3.14
NEIL3-202ENST00000513321 JPH4Q96JJ6 628 aa34.61■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms