RNA–Protein interactions for RNA: ENST00000512858.1

PKD2-207, Transcript of polycystin 2, transient receptor potential cation channel, humanhuman

TSL 2

Gene PKD2, Length 1,554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD2-207ENST00000512858 NISCHQ9Y2I1 1504 aa31.51■■■□□ 2.64
PKD2-207ENST00000512858 CCDC180Q9P1Z9 1646 aa27.54■■■□□ 2
PKD2-207ENST00000512858 ABCC9O60706 1549 aa27.43■■□□□ 1.98
PKD2-207ENST00000512858 ZCCHC6Q5VYS8 1495 aaKnown RBP26.47■■□□□ 1.83
PKD2-207ENST00000512858 DCAF1Q9Y4B6 1507 aa26.15■■□□□ 1.78
PKD2-207ENST00000512858 RB1CC1Q8TDY2 1594 aa26.14■■□□□ 1.78
PKD2-207ENST00000512858 NACADO15069 1562 aa25.98■■□□□ 1.75
PKD2-207ENST00000512858 DCAF8L2P0C7V8 631 aa25.9■■□□□ 1.74
PKD2-207ENST00000512858 MYO15BQ96JP2 1530 aa25.85■■□□□ 1.73
PKD2-207ENST00000512858 DNAJC5BQ9UF47 199 aa25.67■■□□□ 1.7
PKD2-207ENST00000512858 UNC13AQ9UPW8 1703 aa25.62■■□□□ 1.69
PKD2-207ENST00000512858 SHROOM4Q9ULL8 1493 aa25.55■■□□□ 1.68
PKD2-207ENST00000512858 PABPN1Q86U42 306 aaKnown RBP eCLIP25.51■■□□□ 1.67
PKD2-207ENST00000512858 BICRAQ9NZM4 1560 aa25.44■■□□□ 1.66
PKD2-207ENST00000512858 SCRIBQ14160 1630 aa25.15■■□□□ 1.62
PKD2-207ENST00000512858 CC2D2AQ9P2K1 1620 aa24.8■■□□□ 1.56
PKD2-207ENST00000512858 EIF4G1Q04637 1599 aaKnown RBP24.77■■□□□ 1.56
PKD2-207ENST00000512858 CECR2Q9BXF3 1484 aa24.69■■□□□ 1.54
PKD2-207ENST00000512858 SUPT5HO00267 1087 aaKnown RBP24.65■■□□□ 1.54
PKD2-207ENST00000512858 RSF1Q96T23 1441 aaPredicted RBP24.44■■□□□ 1.5
PKD2-207ENST00000512858 BAZ1AQ9NRL2 1556 aaPredicted RBP24.35■■□□□ 1.49
PKD2-207ENST00000512858 MROH2BQ7Z745 1585 aa24.29■■□□□ 1.48
PKD2-207ENST00000512858 SMARCA4P51532 1647 aa24.19■■□□□ 1.46
PKD2-207ENST00000512858 WIZO95785 1651 aa24.06■■□□□ 1.44
PKD2-207ENST00000512858 NCAPD3P42695 1498 aa23.99■■□□□ 1.43
PKD2-207ENST00000512858 PEG3Q9GZU2 1588 aa23.97■■□□□ 1.43
PKD2-207ENST00000512858 ATAD2BQ9ULI0 1458 aa23.94■■□□□ 1.42
PKD2-207ENST00000512858 TOP2AP11388 1531 aaKnown RBP23.88■■□□□ 1.41
PKD2-207ENST00000512858 SMARCA2P51531 1590 aa23.85■■□□□ 1.41
PKD2-207ENST00000512858 HMGXB3Q12766 1538 aa23.84■■□□□ 1.41
PKD2-207ENST00000512858 BAZ1BQ9UIG0 1483 aaKnown RBP23.69■■□□□ 1.38
PKD2-207ENST00000512858 CHIC1Q5VXU3 224 aa23.68■■□□□ 1.38
PKD2-207ENST00000512858 ERCC6Q03468 1493 aa23.64■■□□□ 1.37
PKD2-207ENST00000512858 CCDC88BA6NC98 1476 aa23.62■■□□□ 1.37
PKD2-207ENST00000512858 CUX2O14529 1486 aa23.61■■□□□ 1.37
PKD2-207ENST00000512858 NESP48681 1621 aa23.61■■□□□ 1.37
PKD2-207ENST00000512858 DNAJC5Q9H3Z4 198 aa23.47■■□□□ 1.35
PKD2-207ENST00000512858 LAMC3Q9Y6N6 1575 aa23.44■■□□□ 1.34
PKD2-207ENST00000512858 THOC2Q8NI27 1593 aaKnown RBP23.39■■□□□ 1.33
PKD2-207ENST00000512858 KIF21AQ7Z4S6 1674 aa23.32■■□□□ 1.32
PKD2-207ENST00000512858 TRIM41Q8WV44 630 aa23.26■■□□□ 1.31
PKD2-207ENST00000512858 PDS5BQ9NTI5 1447 aa23.26■■□□□ 1.31
PKD2-207ENST00000512858 CADPSQ9ULU8 1353 aa23.24■■□□□ 1.31
PKD2-207ENST00000512858 CFTRP13569 1480 aa23.11■■□□□ 1.29
PKD2-207ENST00000512858 MRC2Q9UBG0 1479 aa23.09■■□□□ 1.29
PKD2-207ENST00000512858 WDR62O43379 1518 aa23.06■■□□□ 1.28
PKD2-207ENST00000512858 ABCC8Q09428 1581 aa23.05■■□□□ 1.28
PKD2-207ENST00000512858 CEP164Q9UPV0 1460 aa23.01■■□□□ 1.27
PKD2-207ENST00000512858 WRNQ14191 1432 aaPredicted RBP eCLIP23■■□□□ 1.27
PKD2-207ENST00000512858 FANCD2Q9BXW9 1451 aa22.99■■□□□ 1.27
PKD2-207ENST00000512858 PRDM2Q13029 1718 aa22.95■■□□□ 1.26
PKD2-207ENST00000512858 SYNJ1O43426 1573 aa22.84■■□□□ 1.25
PKD2-207ENST00000512858 URB2Q14146 1524 aaKnown RBP22.83■■□□□ 1.25
PKD2-207ENST00000512858 TOP2BQ02880 1626 aa22.82■■□□□ 1.24
PKD2-207ENST00000512858 BIVM-ERCC5R4GMW8 1640 aa22.79■■□□□ 1.24
PKD2-207ENST00000512858 EEA1Q15075 1411 aa22.78■■□□□ 1.24
PKD2-207ENST00000512858 FAM9AQ8IZU1 332 aaPredicted RBP22.72■■□□□ 1.23
PKD2-207ENST00000512858 CUX1P39880 1505 aa22.71■■□□□ 1.23
PKD2-207ENST00000512858 LOC105371045A0A1W2PR82 267 aa22.7■■□□□ 1.22
PKD2-207ENST00000512858 SOGA1O94964 1423 aa22.66■■□□□ 1.22
PKD2-207ENST00000512858 CSRNP3Q8WYN3 585 aa22.59■■□□□ 1.21
PKD2-207ENST00000512858 TOPBP1Q92547 1522 aa22.59■■□□□ 1.21
PKD2-207ENST00000512858 RUSC2Q8N2Y8 1516 aa22.55■■□□□ 1.2
PKD2-207ENST00000512858 IFT140Q96RY7 1462 aa22.55■■□□□ 1.2
PKD2-207ENST00000512858 DNMBPQ6XZF7 1577 aa22.54■■□□□ 1.2
PKD2-207ENST00000512858 ZNF608Q9ULD9 1512 aaPredicted RBP22.53■■□□□ 1.2
PKD2-207ENST00000512858 FGD5Q6ZNL6 1462 aa22.47■■□□□ 1.19
PKD2-207ENST00000512858 OSCARQ8IYS5 282 aa22.46■■□□□ 1.19
PKD2-207ENST00000512858 KIF27Q86VH2 1401 aa22.45■■□□□ 1.18
PKD2-207ENST00000512858 EIF4G3O43432 1585 aaKnown RBP22.43■■□□□ 1.18
PKD2-207ENST00000512858 KIF21BO75037 1637 aa22.4■■□□□ 1.18
PKD2-207ENST00000512858 TARBP1Q13395 1621 aaKnown RBP22.4■■□□□ 1.18
PKD2-207ENST00000512858 GOLGA3Q08378 1498 aa22.39■■□□□ 1.17
PKD2-207ENST00000512858 POLA1P09884 1462 aaPredicted RBP22.37■■□□□ 1.17
PKD2-207ENST00000512858 TNIKQ9UKE5 1360 aa22.35■■□□□ 1.17
PKD2-207ENST00000512858 ABCA10Q8WWZ4 1543 aa22.32■■□□□ 1.16
PKD2-207ENST00000512858 AQRO60306 1485 aaKnown RBP eCLIP22.31■■□□□ 1.16
PKD2-207ENST00000512858 PRXQ9BXM0 1461 aa22.3■■□□□ 1.16
PKD2-207ENST00000512858 EHMT2Q96KQ7 1210 aa22.29■■□□□ 1.16
PKD2-207ENST00000512858 ERICH3Q5RHP9 1530 aa22.28■■□□□ 1.16
PKD2-207ENST00000512858 RIMBP3CA6NJZ7 1639 aa22.27■■□□□ 1.16
PKD2-207ENST00000512858 RIMBP3BA6NNM3 1639 aa22.27■■□□□ 1.16
PKD2-207ENST00000512858 RIMBP3Q9UFD9 1639 aa22.27■■□□□ 1.16
PKD2-207ENST00000512858 RAD54L2Q9Y4B4 1467 aa22.27■■□□□ 1.16
PKD2-207ENST00000512858 UBTFP17480 764 aaKnown RBP22.25■■□□□ 1.15
PKD2-207ENST00000512858 IGF1RP08069 1367 aa22.24■■□□□ 1.15
PKD2-207ENST00000512858 CHD1O14646 1710 aa22.24■■□□□ 1.15
PKD2-207ENST00000512858 RAPGEF2Q9Y4G8 1499 aa22.22■■□□□ 1.15
PKD2-207ENST00000512858 ARHGEF11O15085 1522 aa22.19■■□□□ 1.14
PKD2-207ENST00000512858 WDR97A6NE52 1622 aa22.19■■□□□ 1.14
PKD2-207ENST00000512858 TDRD9Q8NDG6 1382 aaKnown RBP22.17■■□□□ 1.14
PKD2-207ENST00000512858 CEP162Q5TB80 1403 aa22.16■■□□□ 1.14
PKD2-207ENST00000512858 CARMIL1Q5VZK9 1371 aa22.12■■□□□ 1.13
PKD2-207ENST00000512858 SNAPC4Q5SXM2 1469 aa22.11■■□□□ 1.13
PKD2-207ENST00000512858 ABCA5Q8WWZ7 1642 aa22.1■■□□□ 1.13
PKD2-207ENST00000512858 GAPVD1Q14C86 1478 aa22.07■■□□□ 1.12
PKD2-207ENST00000512858 FBLN2P98095 1184 aa22.07■■□□□ 1.12
PKD2-207ENST00000512858 CUL7Q14999 1698 aa22.07■■□□□ 1.12
PKD2-207ENST00000512858 MAGI1Q96QZ7 1491 aaPredicted RBP22.04■■□□□ 1.12
PKD2-207ENST00000512858 GRIN2BQ13224 1484 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms