RNA–Protein interactions for RNA: ENST00000512522.1

PDGFRA-210, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 4

Gene PDGFRA, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-210ENST00000512522 NISCHQ9Y2I1 1504 aa23.31■■□□□ 1.32
PDGFRA-210ENST00000512522 AEBP2Q6ZN18 517 aaPredicted RBP22.49■■□□□ 1.19
PDGFRA-210ENST00000512522 CHIC1Q5VXU3 224 aa22.07■■□□□ 1.12
PDGFRA-210ENST00000512522 CCDC180Q9P1Z9 1646 aa20.44■□□□□ 0.86
PDGFRA-210ENST00000512522 ZCCHC6Q5VYS8 1495 aaKnown RBP19.54■□□□□ 0.72
PDGFRA-210ENST00000512522 ABCC9O60706 1549 aa19.48■□□□□ 0.71
PDGFRA-210ENST00000512522 PHF23Q9BUL5 403 aaPredicted RBP19.48■□□□□ 0.71
PDGFRA-210ENST00000512522 DCAF1Q9Y4B6 1507 aa19.33■□□□□ 0.68
PDGFRA-210ENST00000512522 MYO15BQ96JP2 1530 aa19.21■□□□□ 0.67
PDGFRA-210ENST00000512522 DCAF8L2P0C7V8 631 aa19.18■□□□□ 0.66
PDGFRA-210ENST00000512522 NACADO15069 1562 aa19.1■□□□□ 0.65
PDGFRA-210ENST00000512522 SENP3Q9H4L4 574 aaPredicted RBP18.97■□□□□ 0.63
PDGFRA-210ENST00000512522 RB1CC1Q8TDY2 1594 aa18.97■□□□□ 0.63
PDGFRA-210ENST00000512522 SHROOM4Q9ULL8 1493 aa18.7■□□□□ 0.58
PDGFRA-210ENST00000512522 SCRIBQ14160 1630 aa18.68■□□□□ 0.58
PDGFRA-210ENST00000512522 UNC13AQ9UPW8 1703 aa18.57■□□□□ 0.56
PDGFRA-210ENST00000512522 BICRAQ9NZM4 1560 aa18.44■□□□□ 0.54
PDGFRA-210ENST00000512522 PABPN1Q86U42 306 aaKnown RBP eCLIP18.32■□□□□ 0.52
PDGFRA-210ENST00000512522 CECR2Q9BXF3 1484 aa18.11■□□□□ 0.49
PDGFRA-210ENST00000512522 BAZ1AQ9NRL2 1556 aaPredicted RBP18■□□□□ 0.47
PDGFRA-210ENST00000512522 RSF1Q96T23 1441 aaPredicted RBP17.98■□□□□ 0.47
PDGFRA-210ENST00000512522 MROH2BQ7Z745 1585 aa17.98■□□□□ 0.47
PDGFRA-210ENST00000512522 PLPPR3Q6T4P5 718 aa17.96■□□□□ 0.47
PDGFRA-210ENST00000512522 SMARCA4P51532 1647 aa17.95■□□□□ 0.46
PDGFRA-210ENST00000512522 EIF4G1Q04637 1599 aaKnown RBP17.87■□□□□ 0.45
PDGFRA-210ENST00000512522 SUPT5HO00267 1087 aaKnown RBP17.87■□□□□ 0.45
PDGFRA-210ENST00000512522 PEG3Q9GZU2 1588 aa17.8■□□□□ 0.44
PDGFRA-210ENST00000512522 WIZO95785 1651 aa17.79■□□□□ 0.44
PDGFRA-210ENST00000512522 ATAD2BQ9ULI0 1458 aa17.75■□□□□ 0.43
PDGFRA-210ENST00000512522 SMARCA2P51531 1590 aa17.7■□□□□ 0.42
PDGFRA-210ENST00000512522 NCAPD3P42695 1498 aa17.66■□□□□ 0.42
PDGFRA-210ENST00000512522 CC2D2AQ9P2K1 1620 aa17.65■□□□□ 0.42
PDGFRA-210ENST00000512522 FOXD1Q16676 465 aa17.64■□□□□ 0.41
PDGFRA-210ENST00000512522 TOP2AP11388 1531 aaKnown RBP17.63■□□□□ 0.41
PDGFRA-210ENST00000512522 HMGXB3Q12766 1538 aa17.58■□□□□ 0.41
PDGFRA-210ENST00000512522 BAZ1BQ9UIG0 1483 aaKnown RBP17.57■□□□□ 0.4
PDGFRA-210ENST00000512522 DNAJC5BQ9UF47 199 aa17.46■□□□□ 0.39
PDGFRA-210ENST00000512522 CCDC88BA6NC98 1476 aa17.45■□□□□ 0.38
PDGFRA-210ENST00000512522 CFTRP13569 1480 aa17.18■□□□□ 0.34
PDGFRA-210ENST00000512522 CADPSQ9ULU8 1353 aa17.15■□□□□ 0.34
PDGFRA-210ENST00000512522 PPP6R1Q9UPN7 881 aa17.14■□□□□ 0.33
PDGFRA-210ENST00000512522 ADRA2BP18089 450 aa17.13■□□□□ 0.33
PDGFRA-210ENST00000512522 LAMC3Q9Y6N6 1575 aa17.06■□□□□ 0.32
PDGFRA-210ENST00000512522 NESP48681 1621 aa17.04■□□□□ 0.32
PDGFRA-210ENST00000512522 PRDM2Q13029 1718 aa17.04■□□□□ 0.32
PDGFRA-210ENST00000512522 ABCC8Q09428 1581 aa16.94■□□□□ 0.3
PDGFRA-210ENST00000512522 FANCD2Q9BXW9 1451 aa16.93■□□□□ 0.3
PDGFRA-210ENST00000512522 PDS5BQ9NTI5 1447 aa16.92■□□□□ 0.3
PDGFRA-210ENST00000512522 WRNQ14191 1432 aaPredicted RBP eCLIP16.9■□□□□ 0.3
PDGFRA-210ENST00000512522 TRIM41Q8WV44 630 aa16.87■□□□□ 0.29
PDGFRA-210ENST00000512522 SYNJ1O43426 1573 aa16.85■□□□□ 0.29
PDGFRA-210ENST00000512522 CEP164Q9UPV0 1460 aa16.84■□□□□ 0.29
PDGFRA-210ENST00000512522 CUX1P39880 1505 aa16.83■□□□□ 0.28
PDGFRA-210ENST00000512522 KIF21AQ7Z4S6 1674 aa16.82■□□□□ 0.28
PDGFRA-210ENST00000512522 TOP2BQ02880 1626 aa16.81■□□□□ 0.28
PDGFRA-210ENST00000512522 BIVM-ERCC5R4GMW8 1640 aa16.81■□□□□ 0.28
PDGFRA-210ENST00000512522 URB2Q14146 1524 aaKnown RBP16.75■□□□□ 0.27
PDGFRA-210ENST00000512522 DNMBPQ6XZF7 1577 aa16.75■□□□□ 0.27
PDGFRA-210ENST00000512522 TOPBP1Q92547 1522 aa16.74■□□□□ 0.27
PDGFRA-210ENST00000512522 MRC2Q9UBG0 1479 aa16.72■□□□□ 0.27
PDGFRA-210ENST00000512522 ERCC6Q03468 1493 aa16.7■□□□□ 0.26
PDGFRA-210ENST00000512522 PIAS4Q8N2W9 510 aaPredicted RBP16.67■□□□□ 0.26
PDGFRA-210ENST00000512522 FGD5Q6ZNL6 1462 aa16.67■□□□□ 0.26
PDGFRA-210ENST00000512522 WDR62O43379 1518 aa16.66■□□□□ 0.26
PDGFRA-210ENST00000512522 THOC2Q8NI27 1593 aaKnown RBP16.65■□□□□ 0.26
PDGFRA-210ENST00000512522 POLA1P09884 1462 aaPredicted RBP16.63■□□□□ 0.25
PDGFRA-210ENST00000512522 SOGA1O94964 1423 aa16.61■□□□□ 0.25
PDGFRA-210ENST00000512522 RUSC2Q8N2Y8 1516 aa16.56■□□□□ 0.24
PDGFRA-210ENST00000512522 CUX2O14529 1486 aa16.55■□□□□ 0.24
PDGFRA-210ENST00000512522 RAD54L2Q9Y4B4 1467 aa16.55■□□□□ 0.24
PDGFRA-210ENST00000512522 EEA1Q15075 1411 aa16.55■□□□□ 0.24
PDGFRA-210ENST00000512522 ABCA10Q8WWZ4 1543 aa16.55■□□□□ 0.24
PDGFRA-210ENST00000512522 TARBP1Q13395 1621 aaKnown RBP16.52■□□□□ 0.24
PDGFRA-210ENST00000512522 WDR97A6NE52 1622 aa16.5■□□□□ 0.23
PDGFRA-210ENST00000512522 KIF27Q86VH2 1401 aa16.5■□□□□ 0.23
PDGFRA-210ENST00000512522 FAM9AQ8IZU1 332 aaPredicted RBP16.49■□□□□ 0.23
PDGFRA-210ENST00000512522 IFT140Q96RY7 1462 aa16.48■□□□□ 0.23
PDGFRA-210ENST00000512522 CSRNP3Q8WYN3 585 aa16.47■□□□□ 0.23
PDGFRA-210ENST00000512522 IGF1RP08069 1367 aa16.42■□□□□ 0.22
PDGFRA-210ENST00000512522 ABCA5Q8WWZ7 1642 aa16.42■□□□□ 0.22
PDGFRA-210ENST00000512522 TDRD9Q8NDG6 1382 aaKnown RBP16.41■□□□□ 0.22
PDGFRA-210ENST00000512522 GAPVD1Q14C86 1478 aa16.39■□□□□ 0.21
PDGFRA-210ENST00000512522 ZNF608Q9ULD9 1512 aaPredicted RBP16.39■□□□□ 0.21
PDGFRA-210ENST00000512522 PRXQ9BXM0 1461 aa16.37■□□□□ 0.21
PDGFRA-210ENST00000512522 LOC105371045A0A1W2PR82 267 aa16.36■□□□□ 0.21
PDGFRA-210ENST00000512522 AQRO60306 1485 aaKnown RBP eCLIP16.35■□□□□ 0.21
PDGFRA-210ENST00000512522 ERICH3Q5RHP9 1530 aa16.35■□□□□ 0.21
PDGFRA-210ENST00000512522 KIF21BO75037 1637 aa16.34■□□□□ 0.21
PDGFRA-210ENST00000512522 EIF4G3O43432 1585 aaKnown RBP16.3■□□□□ 0.2
PDGFRA-210ENST00000512522 GRIN2BQ13224 1484 aa16.3■□□□□ 0.2
PDGFRA-210ENST00000512522 CARMIL1Q5VZK9 1371 aa16.3■□□□□ 0.2
PDGFRA-210ENST00000512522 PBRM1Q86U86 1689 aa16.28■□□□□ 0.2
PDGFRA-210ENST00000512522 GOLGA3Q08378 1498 aa16.28■□□□□ 0.2
PDGFRA-210ENST00000512522 RAPGEF2Q9Y4G8 1499 aa16.28■□□□□ 0.2
PDGFRA-210ENST00000512522 CUL7Q14999 1698 aa16.27■□□□□ 0.2
PDGFRA-210ENST00000512522 FHAD1B1AJZ9 1412 aa16.22■□□□□ 0.19
PDGFRA-210ENST00000512522 TNIKQ9UKE5 1360 aa16.22■□□□□ 0.19
PDGFRA-210ENST00000512522 ADAMTS12P58397 1594 aa16.21■□□□□ 0.18
PDGFRA-210ENST00000512522 EHMT2Q96KQ7 1210 aa16.2■□□□□ 0.18
PDGFRA-210ENST00000512522 SNAPC4Q5SXM2 1469 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms