RNA–Protein interactions for RNA: ENST00000512452.1

DEPDC1B-206, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-206ENST00000512452 NISCHQ9Y2I1 1504 aa29.15■■■□□ 2.26
DEPDC1B-206ENST00000512452 ABCC9O60706 1549 aa27.77■■■□□ 2.04
DEPDC1B-206ENST00000512452 DNAJC5BQ9UF47 199 aa27.51■■□□□ 1.99
DEPDC1B-206ENST00000512452 DNAJC5Q9H3Z4 198 aa26.4■■□□□ 1.82
DEPDC1B-206ENST00000512452 CCDC180Q9P1Z9 1646 aa26.15■■□□□ 1.78
DEPDC1B-206ENST00000512452 RB1CC1Q8TDY2 1594 aa25.7■■□□□ 1.71
DEPDC1B-206ENST00000512452 PABPN1Q86U42 306 aaKnown RBP eCLIP25.68■■□□□ 1.7
DEPDC1B-206ENST00000512452 CECR2Q9BXF3 1484 aa25.18■■□□□ 1.62
DEPDC1B-206ENST00000512452 NACADO15069 1562 aa25.15■■□□□ 1.62
DEPDC1B-206ENST00000512452 UNC13AQ9UPW8 1703 aa25.05■■□□□ 1.6
DEPDC1B-206ENST00000512452 BICRAQ9NZM4 1560 aa25■■□□□ 1.59
DEPDC1B-206ENST00000512452 CC2D2AQ9P2K1 1620 aa24.97■■□□□ 1.59
DEPDC1B-206ENST00000512452 DCAF8L2P0C7V8 631 aa24.87■■□□□ 1.57
DEPDC1B-206ENST00000512452 TRIM41Q8WV44 630 aa24.62■■□□□ 1.53
DEPDC1B-206ENST00000512452 ZCCHC6Q5VYS8 1495 aaKnown RBP24.56■■□□□ 1.52
DEPDC1B-206ENST00000512452 CUX2O14529 1486 aa24.55■■□□□ 1.52
DEPDC1B-206ENST00000512452 EIF4G1Q04637 1599 aaKnown RBP24.52■■□□□ 1.52
DEPDC1B-206ENST00000512452 SHROOM4Q9ULL8 1493 aa24.48■■□□□ 1.51
DEPDC1B-206ENST00000512452 MYO15BQ96JP2 1530 aa24.27■■□□□ 1.48
DEPDC1B-206ENST00000512452 DCAF1Q9Y4B6 1507 aa24.24■■□□□ 1.47
DEPDC1B-206ENST00000512452 ERCC6Q03468 1493 aa24.09■■□□□ 1.45
DEPDC1B-206ENST00000512452 SCRIBQ14160 1630 aa23.83■■□□□ 1.41
DEPDC1B-206ENST00000512452 AEBP2Q6ZN18 517 aaPredicted RBP23.6■■□□□ 1.37
DEPDC1B-206ENST00000512452 NESP48681 1621 aa23.41■■□□□ 1.34
DEPDC1B-206ENST00000512452 THOC2Q8NI27 1593 aaKnown RBP23.4■■□□□ 1.34
DEPDC1B-206ENST00000512452 NCAPD3P42695 1498 aa23.28■■□□□ 1.32
DEPDC1B-206ENST00000512452 OSCARQ8IYS5 282 aa23.27■■□□□ 1.32
DEPDC1B-206ENST00000512452 SMARCA2P51531 1590 aa23.16■■□□□ 1.3
DEPDC1B-206ENST00000512452 BAZ1AQ9NRL2 1556 aaPredicted RBP23.12■■□□□ 1.29
DEPDC1B-206ENST00000512452 TRHP20396 242 aaPredicted RBP23.11■■□□□ 1.29
DEPDC1B-206ENST00000512452 RIMBP3CA6NJZ7 1639 aa23.02■■□□□ 1.28
DEPDC1B-206ENST00000512452 RIMBP3BA6NNM3 1639 aa23.02■■□□□ 1.28
DEPDC1B-206ENST00000512452 RIMBP3Q9UFD9 1639 aa23.02■■□□□ 1.28
DEPDC1B-206ENST00000512452 KIF21AQ7Z4S6 1674 aa22.98■■□□□ 1.27
DEPDC1B-206ENST00000512452 ATAD2BQ9ULI0 1458 aa22.98■■□□□ 1.27
DEPDC1B-206ENST00000512452 SUPT5HO00267 1087 aaKnown RBP22.96■■□□□ 1.27
DEPDC1B-206ENST00000512452 LAMC3Q9Y6N6 1575 aa22.95■■□□□ 1.26
DEPDC1B-206ENST00000512452 PDS5BQ9NTI5 1447 aa22.93■■□□□ 1.26
DEPDC1B-206ENST00000512452 HMGXB3Q12766 1538 aa22.89■■□□□ 1.26
DEPDC1B-206ENST00000512452 ILDR1Q86SU0 546 aaPredicted RBP22.87■■□□□ 1.25
DEPDC1B-206ENST00000512452 CYB5RLQ6IPT4 315 aa22.84■■□□□ 1.25
DEPDC1B-206ENST00000512452 ARHGEF11O15085 1522 aa22.8■■□□□ 1.24
DEPDC1B-206ENST00000512452 MRC2Q9UBG0 1479 aa22.79■■□□□ 1.24
DEPDC1B-206ENST00000512452 WDR62O43379 1518 aa22.76■■□□□ 1.23
DEPDC1B-206ENST00000512452 RSF1Q96T23 1441 aaPredicted RBP22.67■■□□□ 1.22
DEPDC1B-206ENST00000512452 BAZ1BQ9UIG0 1483 aaKnown RBP22.66■■□□□ 1.22
DEPDC1B-206ENST00000512452 CADPSQ9ULU8 1353 aa22.51■■□□□ 1.19
DEPDC1B-206ENST00000512452 SMARCA4P51532 1647 aa22.51■■□□□ 1.19
DEPDC1B-206ENST00000512452 ARAP1Q96P48 1450 aa22.47■■□□□ 1.19
DEPDC1B-206ENST00000512452 MROH2BQ7Z745 1585 aa22.46■■□□□ 1.19
DEPDC1B-206ENST00000512452 CEP164Q9UPV0 1460 aa22.39■■□□□ 1.17
DEPDC1B-206ENST00000512452 CHIC1Q5VXU3 224 aa22.3■■□□□ 1.16
DEPDC1B-206ENST00000512452 PEG3Q9GZU2 1588 aa22.29■■□□□ 1.16
DEPDC1B-206ENST00000512452 WIZO95785 1651 aa22.26■■□□□ 1.15
DEPDC1B-206ENST00000512452 FANCD2Q9BXW9 1451 aa22.24■■□□□ 1.15
DEPDC1B-206ENST00000512452 TOP2AP11388 1531 aaKnown RBP22.15■■□□□ 1.14
DEPDC1B-206ENST00000512452 URB2Q14146 1524 aaKnown RBP22.14■■□□□ 1.13
DEPDC1B-206ENST00000512452 ZNF608Q9ULD9 1512 aaPredicted RBP22.13■■□□□ 1.13
DEPDC1B-206ENST00000512452 FBLN2P98095 1184 aa22.01■■□□□ 1.11
DEPDC1B-206ENST00000512452 IFT140Q96RY7 1462 aa22.01■■□□□ 1.11
DEPDC1B-206ENST00000512452 CHD1O14646 1710 aa22■■□□□ 1.11
DEPDC1B-206ENST00000512452 KDM4FA0A1W2PPD8 638 aa21.93■■□□□ 1.1
DEPDC1B-206ENST00000512452 CFTRP13569 1480 aa21.9■■□□□ 1.1
DEPDC1B-206ENST00000512452 EIF4G3O43432 1585 aaKnown RBP21.87■■□□□ 1.09
DEPDC1B-206ENST00000512452 CCDC88BA6NC98 1476 aa21.87■■□□□ 1.09
DEPDC1B-206ENST00000512452 AQRO60306 1485 aaKnown RBP eCLIP21.77■■□□□ 1.082e-7■■■■■ 29
DEPDC1B-206ENST00000512452 CLASP1Q7Z460 1538 aa21.73■■□□□ 1.07
DEPDC1B-206ENST00000512452 FBXO41Q8TF61 875 aa21.72■■□□□ 1.07
DEPDC1B-206ENST00000512452 GAPVD1Q14C86 1478 aa21.69■■□□□ 1.06
DEPDC1B-206ENST00000512452 TOPBP1Q92547 1522 aa21.63■■□□□ 1.05
DEPDC1B-206ENST00000512452 ERCC6L2Q5T890 1561 aa21.62■■□□□ 1.05
DEPDC1B-206ENST00000512452 LMTK3Q96Q04 1460 aa21.6■■□□□ 1.05
DEPDC1B-206ENST00000512452 SYNJ1O43426 1573 aa21.6■■□□□ 1.05
DEPDC1B-206ENST00000512452 CHMP7Q8WUX9 453 aaPredicted RBP21.58■■□□□ 1.05
DEPDC1B-206ENST00000512452 KIF13AQ9H1H9 1805 aa21.53■■□□□ 1.04
DEPDC1B-206ENST00000512452 TARBP1Q13395 1621 aaKnown RBP21.52■■□□□ 1.04
DEPDC1B-206ENST00000512452 SOCS7O14512 581 aa21.51■■□□□ 1.03
DEPDC1B-206ENST00000512452 HECW2Q9P2P5 1572 aa21.5■■□□□ 1.03
DEPDC1B-206ENST00000512452 ABCC8Q09428 1581 aa21.49■■□□□ 1.03
DEPDC1B-206ENST00000512452 SNAPC4Q5SXM2 1469 aa21.45■■□□□ 1.03
DEPDC1B-206ENST00000512452 PRDM2Q13029 1718 aa21.44■■□□□ 1.02
DEPDC1B-206ENST00000512452 TDRD9Q8NDG6 1382 aaKnown RBP21.41■■□□□ 1.02
DEPDC1B-206ENST00000512452 FAM69CQ0P6D2 419 aa21.4■■□□□ 1.02
DEPDC1B-206ENST00000512452 DNMBPQ6XZF7 1577 aa21.38■■□□□ 1.01
DEPDC1B-206ENST00000512452 KDM6BO15054 1643 aa21.37■■□□□ 1.01
DEPDC1B-206ENST00000512452 ILDR2Q71H61 639 aa21.36■■□□□ 1.01
DEPDC1B-206ENST00000512452 WRNQ14191 1432 aaPredicted RBP eCLIP21.35■■□□□ 1.01
DEPDC1B-206ENST00000512452 MAGI1Q96QZ7 1491 aaPredicted RBP21.32■■□□□ 1
DEPDC1B-206ENST00000512452 ADGRL1O94910 1474 aa21.32■■□□□ 1
DEPDC1B-206ENST00000512452 SYNJ2O15056 1496 aa21.31■■□□□ 1
DEPDC1B-206ENST00000512452 POLA1P09884 1462 aaPredicted RBP21.31■■□□□ 1
DEPDC1B-206ENST00000512452 RAD54L2Q9Y4B4 1467 aa21.29■■□□□ 1
DEPDC1B-206ENST00000512452 EEA1Q15075 1411 aa21.29■■□□□ 1
DEPDC1B-206ENST00000512452 ABCC10Q5T3U5 1492 aa21.27■■□□□ 1
DEPDC1B-206ENST00000512452 SOGA1O94964 1423 aa21.24■□□□□ 0.99
DEPDC1B-206ENST00000512452 LOC105371045A0A1W2PR82 267 aa21.24■□□□□ 0.99
DEPDC1B-206ENST00000512452 GRIN2BQ13224 1484 aa21.2■□□□□ 0.98
DEPDC1B-206ENST00000512452 DISP3Q9P2K9 1392 aa21.19■□□□□ 0.98
DEPDC1B-206ENST00000512452 WDR97A6NE52 1622 aa21.17■□□□□ 0.98
DEPDC1B-206ENST00000512452 TOP2BQ02880 1626 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms