RNA–Protein interactions for RNA: ENST00000512264.1

TLR3-204, Transcript of toll like receptor 3, humanhuman

TSL 1 (best)

Gene TLR3, Length 2,942 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TLR3-204ENST00000512264 NISCHQ9Y2I1 1504 aa21.6■■□□□ 1.05
TLR3-204ENST00000512264 CCDC180Q9P1Z9 1646 aa18.5■□□□□ 0.55
TLR3-204ENST00000512264 SHROOM4Q9ULL8 1493 aa18.24■□□□□ 0.51
TLR3-204ENST00000512264 DCAF8L2P0C7V8 631 aa18.23■□□□□ 0.51
TLR3-204ENST00000512264 ZCCHC6Q5VYS8 1495 aaKnown RBP18.18■□□□□ 0.5
TLR3-204ENST00000512264 SUPT5HO00267 1087 aaKnown RBP17.71■□□□□ 0.43
TLR3-204ENST00000512264 DCAF1Q9Y4B6 1507 aa17.68■□□□□ 0.42
TLR3-204ENST00000512264 ABCC9O60706 1549 aa17.62■□□□□ 0.41
TLR3-204ENST00000512264 SCRIBQ14160 1630 aa17.35■□□□□ 0.37
TLR3-204ENST00000512264 MYO15BQ96JP2 1530 aa17.32■□□□□ 0.36
TLR3-204ENST00000512264 NACADO15069 1562 aa17.25■□□□□ 0.35
TLR3-204ENST00000512264 RB1CC1Q8TDY2 1594 aa17.08■□□□□ 0.33
TLR3-204ENST00000512264 RSF1Q96T23 1441 aaPredicted RBP16.95■□□□□ 0.3
TLR3-204ENST00000512264 CHIC1Q5VXU3 224 aa16.94■□□□□ 0.3
TLR3-204ENST00000512264 CECR2Q9BXF3 1484 aa16.9■□□□□ 0.3
TLR3-204ENST00000512264 PABPN1Q86U42 306 aaKnown RBP eCLIP16.81■□□□□ 0.28
TLR3-204ENST00000512264 MROH2BQ7Z745 1585 aa16.78■□□□□ 0.28
TLR3-204ENST00000512264 UNC13AQ9UPW8 1703 aa16.71■□□□□ 0.27
TLR3-204ENST00000512264 WIZO95785 1651 aa16.65■□□□□ 0.26
TLR3-204ENST00000512264 BAZ1AQ9NRL2 1556 aaPredicted RBP16.64■□□□□ 0.25
TLR3-204ENST00000512264 BICRAQ9NZM4 1560 aa16.57■□□□□ 0.24
TLR3-204ENST00000512264 SMARCA4P51532 1647 aa16.52■□□□□ 0.24
TLR3-204ENST00000512264 TRIM41Q8WV44 630 aa16.52■□□□□ 0.24
TLR3-204ENST00000512264 LOC105371045A0A1W2PR82 267 aa16.46■□□□□ 0.22
TLR3-204ENST00000512264 FAM9AQ8IZU1 332 aaPredicted RBP16.4■□□□□ 0.22
TLR3-204ENST00000512264 TOP2AP11388 1531 aaKnown RBP16.39■□□□□ 0.21
TLR3-204ENST00000512264 CCDC88BA6NC98 1476 aa16.33■□□□□ 0.21
TLR3-204ENST00000512264 EHMT2Q96KQ7 1210 aa16.32■□□□□ 0.2
TLR3-204ENST00000512264 SMARCA2P51531 1590 aa16.28■□□□□ 0.2
TLR3-204ENST00000512264 ATAD2BQ9ULI0 1458 aa16.23■□□□□ 0.19
TLR3-204ENST00000512264 BAZ1BQ9UIG0 1483 aaKnown RBP16.2■□□□□ 0.18
TLR3-204ENST00000512264 PEG3Q9GZU2 1588 aa16.19■□□□□ 0.18
TLR3-204ENST00000512264 EIF4G1Q04637 1599 aaKnown RBP16.17■□□□□ 0.18
TLR3-204ENST00000512264 ABCC8Q09428 1581 aa16.17■□□□□ 0.18
TLR3-204ENST00000512264 PCGF6Q9BYE7 350 aa16.06■□□□□ 0.16
TLR3-204ENST00000512264 NCAPD3P42695 1498 aa15.98■□□□□ 0.15
TLR3-204ENST00000512264 WRNQ14191 1432 aaPredicted RBP eCLIP15.98■□□□□ 0.15
TLR3-204ENST00000512264 SOGA1O94964 1423 aa15.95■□□□□ 0.14
TLR3-204ENST00000512264 HMGXB3Q12766 1538 aa15.92■□□□□ 0.14
TLR3-204ENST00000512264 RUSC2Q8N2Y8 1516 aa15.88■□□□□ 0.13
TLR3-204ENST00000512264 CSRNP3Q8WYN3 585 aa15.86■□□□□ 0.13
TLR3-204ENST00000512264 SYNJ1O43426 1573 aa15.85■□□□□ 0.13
TLR3-204ENST00000512264 PPARGC1BQ86YN6 1023 aaKnown RBP15.85■□□□□ 0.13
TLR3-204ENST00000512264 UBTFP17480 764 aaKnown RBP15.83■□□□□ 0.12
TLR3-204ENST00000512264 TRIM26Q12899 539 aaPredicted RBP15.81■□□□□ 0.12
TLR3-204ENST00000512264 CC2D2AQ9P2K1 1620 aa15.8■□□□□ 0.12
TLR3-204ENST00000512264 EEA1Q15075 1411 aa15.78■□□□□ 0.12
TLR3-204ENST00000512264 CFTRP13569 1480 aa15.74■□□□□ 0.11
TLR3-204ENST00000512264 HRCP23327 699 aa15.69■□□□□ 0.1
TLR3-204ENST00000512264 CEP162Q5TB80 1403 aa15.69■□□□□ 0.1
TLR3-204ENST00000512264 TOP2BQ02880 1626 aa15.68■□□□□ 0.1
TLR3-204ENST00000512264 CADPSQ9ULU8 1353 aa15.68■□□□□ 0.1
TLR3-204ENST00000512264 GOLGA3Q08378 1498 aa15.67■□□□□ 0.1
TLR3-204ENST00000512264 TNIKQ9UKE5 1360 aa15.67■□□□□ 0.1
TLR3-204ENST00000512264 TTBK1Q5TCY1 1321 aaPredicted RBP15.67■□□□□ 0.1
TLR3-204ENST00000512264 RANGAP1P46060 587 aaPredicted RBP15.67■□□□□ 0.1
TLR3-204ENST00000512264 CUX1P39880 1505 aa15.64■□□□□ 0.09
TLR3-204ENST00000512264 CEP164Q9UPV0 1460 aa15.63■□□□□ 0.09
TLR3-204ENST00000512264 BIVM-ERCC5R4GMW8 1640 aa15.6■□□□□ 0.09
TLR3-204ENST00000512264 RAPGEF2Q9Y4G8 1499 aa15.58■□□□□ 0.08
TLR3-204ENST00000512264 DNAJC5BQ9UF47 199 aa15.57■□□□□ 0.08
TLR3-204ENST00000512264 NESP48681 1621 aa15.54■□□□□ 0.08
TLR3-204ENST00000512264 KIF21BO75037 1637 aa15.54■□□□□ 0.08
TLR3-204ENST00000512264 KIF27Q86VH2 1401 aa15.53■□□□□ 0.08
TLR3-204ENST00000512264 FANCD2Q9BXW9 1451 aa15.53■□□□□ 0.08
TLR3-204ENST00000512264 CLIP1P30622 1438 aa15.5■□□□□ 0.07
TLR3-204ENST00000512264 PRDM2Q13029 1718 aa15.48■□□□□ 0.07
TLR3-204ENST00000512264 CUX2O14529 1486 aa15.47■□□□□ 0.07
TLR3-204ENST00000512264 FGD5Q6ZNL6 1462 aa15.46■□□□□ 0.07
TLR3-204ENST00000512264 PRXQ9BXM0 1461 aa15.44■□□□□ 0.06
TLR3-204ENST00000512264 APLP2Q06481 763 aa15.4■□□□□ 0.06
TLR3-204ENST00000512264 ERICH3Q5RHP9 1530 aa15.38■□□□□ 0.05
TLR3-204ENST00000512264 RAD54L2Q9Y4B4 1467 aa15.37■□□□□ 0.05
TLR3-204ENST00000512264 IGF1RP08069 1367 aa15.37■□□□□ 0.05
TLR3-204ENST00000512264 TOPBP1Q92547 1522 aa15.35■□□□□ 0.05
TLR3-204ENST00000512264 LAMC3Q9Y6N6 1575 aa15.35■□□□□ 0.05
TLR3-204ENST00000512264 VPS8Q8N3P4 1428 aa15.35■□□□□ 0.05
TLR3-204ENST00000512264 DNMBPQ6XZF7 1577 aa15.34■□□□□ 0.05
TLR3-204ENST00000512264 PDS5BQ9NTI5 1447 aa15.34■□□□□ 0.05
TLR3-204ENST00000512264 POLA1P09884 1462 aaPredicted RBP15.33■□□□□ 0.04
TLR3-204ENST00000512264 CARMIL1Q5VZK9 1371 aa15.33■□□□□ 0.04
TLR3-204ENST00000512264 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.31■□□□□ 0.04
TLR3-204ENST00000512264 URB2Q14146 1524 aaKnown RBP15.29■□□□□ 0.04
TLR3-204ENST00000512264 ZEB1P37275 1124 aaPredicted RBP15.27■□□□□ 0.03
TLR3-204ENST00000512264 CCER1Q8TC90 406 aaPredicted RBP15.26■□□□□ 0.03
TLR3-204ENST00000512264 TDRD9Q8NDG6 1382 aaKnown RBP15.25■□□□□ 0.03
TLR3-204ENST00000512264 ARAP1Q96P48 1450 aa15.24■□□□□ 0.03
TLR3-204ENST00000512264 ABCA10Q8WWZ4 1543 aa15.24■□□□□ 0.03
TLR3-204ENST00000512264 P3H3Q8IVL6 736 aa15.22■□□□□ 0.03
TLR3-204ENST00000512264 HNRNPUL2Q1KMD3 747 aaKnown RBP15.21■□□□□ 0.03
TLR3-204ENST00000512264 KIF21AQ7Z4S6 1674 aa15.21■□□□□ 0.03
TLR3-204ENST00000512264 ARHGAP35Q9NRY4 1499 aa15.2■□□□□ 0.02
TLR3-204ENST00000512264 KANK4Q5T7N3 995 aaPredicted RBP15.17■□□□□ 0.02
TLR3-204ENST00000512264 ATP1B4Q9UN42 357 aaPredicted RBP15.16■□□□□ 0.02
TLR3-204ENST00000512264 GAPVD1Q14C86 1478 aa15.14■□□□□ 0.01
TLR3-204ENST00000512264 MRC2Q9UBG0 1479 aa15.09■□□□□ 0.01
TLR3-204ENST00000512264 CUL7Q14999 1698 aa15.07■□□□□ 0
TLR3-204ENST00000512264 AQRO60306 1485 aaKnown RBP eCLIP15.07■□□□□ 0
TLR3-204ENST00000512264 ERCC6Q03468 1493 aa15.07■□□□□ 0
TLR3-204ENST00000512264 WDR97A6NE52 1622 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms