RNA–Protein interactions for RNA: ENST00000512262.1

ARHGEF38-IT1-201, ARHGEF38 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene ARHGEF38-IT1, Length 456 nt, Biotype sense intronic.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF38-IT1-201ENST00000512262 AEBP2Q6ZN18 517 aaPredicted RBP28.96■■■□□ 2.23
ARHGEF38-IT1-201ENST00000512262 CHIC1Q5VXU3 224 aa27.38■■□□□ 1.97
ARHGEF38-IT1-201ENST00000512262 NISCHQ9Y2I1 1504 aa26.16■■□□□ 1.78
ARHGEF38-IT1-201ENST00000512262 SENP3Q9H4L4 574 aaPredicted RBP24.54■■□□□ 1.52
ARHGEF38-IT1-201ENST00000512262 PHF23Q9BUL5 403 aaPredicted RBP24.3■■□□□ 1.48
ARHGEF38-IT1-201ENST00000512262 CCDC180Q9P1Z9 1646 aa23.34■■□□□ 1.33
ARHGEF38-IT1-201ENST00000512262 ABCC9O60706 1549 aa23.23■■□□□ 1.31
ARHGEF38-IT1-201ENST00000512262 FOXD1Q16676 465 aa22.98■■□□□ 1.27
ARHGEF38-IT1-201ENST00000512262 RB1CC1Q8TDY2 1594 aa22.07■■□□□ 1.12
ARHGEF38-IT1-201ENST00000512262 DNAJC5BQ9UF47 199 aa22.06■■□□□ 1.12
ARHGEF38-IT1-201ENST00000512262 NACADO15069 1562 aa21.96■■□□□ 1.11
ARHGEF38-IT1-201ENST00000512262 MYO15BQ96JP2 1530 aa21.85■■□□□ 1.09
ARHGEF38-IT1-201ENST00000512262 DCAF8L2P0C7V8 631 aa21.84■■□□□ 1.09
ARHGEF38-IT1-201ENST00000512262 PLPPR3Q6T4P5 718 aa21.8■■□□□ 1.08
ARHGEF38-IT1-201ENST00000512262 ZCCHC6Q5VYS8 1495 aaKnown RBP21.77■■□□□ 1.08
ARHGEF38-IT1-201ENST00000512262 DCAF1Q9Y4B6 1507 aa21.71■■□□□ 1.07
ARHGEF38-IT1-201ENST00000512262 PABPN1Q86U42 306 aaKnown RBP eCLIP21.56■■□□□ 1.04
ARHGEF38-IT1-201ENST00000512262 PPP6R1Q9UPN7 881 aa21.55■■□□□ 1.04
ARHGEF38-IT1-201ENST00000512262 UNC13AQ9UPW8 1703 aa21.48■■□□□ 1.03
ARHGEF38-IT1-201ENST00000512262 ADRA2BP18089 450 aa21.43■■□□□ 1.02
ARHGEF38-IT1-201ENST00000512262 PIAS4Q8N2W9 510 aaPredicted RBP21.4■■□□□ 1.02
ARHGEF38-IT1-201ENST00000512262 MSH5O43196 834 aa21.39■■□□□ 1.01
ARHGEF38-IT1-201ENST00000512262 BICRAQ9NZM4 1560 aa21.35■■□□□ 1.01
ARHGEF38-IT1-201ENST00000512262 SHROOM4Q9ULL8 1493 aa21.19■□□□□ 0.98
ARHGEF38-IT1-201ENST00000512262 SCRIBQ14160 1630 aa21.18■□□□□ 0.98
ARHGEF38-IT1-201ENST00000512262 POTEDQ86YR6 584 aa21.03■□□□□ 0.96
ARHGEF38-IT1-201ENST00000512262 CECR2Q9BXF3 1484 aa21.01■□□□□ 0.95
ARHGEF38-IT1-201ENST00000512262 CC2D2AQ9P2K1 1620 aa21■□□□□ 0.95
ARHGEF38-IT1-201ENST00000512262 EIF4G1Q04637 1599 aaKnown RBP20.88■□□□□ 0.93
ARHGEF38-IT1-201ENST00000512262 DNAJC5Q9H3Z4 198 aa20.64■□□□□ 0.89
ARHGEF38-IT1-201ENST00000512262 BAZ1AQ9NRL2 1556 aaPredicted RBP20.33■□□□□ 0.84
ARHGEF38-IT1-201ENST00000512262 SMARCA4P51532 1647 aa20.3■□□□□ 0.84
ARHGEF38-IT1-201ENST00000512262 CUX2O14529 1486 aa20.28■□□□□ 0.84
ARHGEF38-IT1-201ENST00000512262 SMARCA2P51531 1590 aa20.25■□□□□ 0.83
ARHGEF38-IT1-201ENST00000512262 NCAPD3P42695 1498 aa20.24■□□□□ 0.83
ARHGEF38-IT1-201ENST00000512262 ATAD2BQ9ULI0 1458 aa20.2■□□□□ 0.82
ARHGEF38-IT1-201ENST00000512262 PEG3Q9GZU2 1588 aa20.14■□□□□ 0.81
ARHGEF38-IT1-201ENST00000512262 HMGXB3Q12766 1538 aa20.14■□□□□ 0.81
ARHGEF38-IT1-201ENST00000512262 ERCC6Q03468 1493 aa20.14■□□□□ 0.81
ARHGEF38-IT1-201ENST00000512262 MROH2BQ7Z745 1585 aa20.11■□□□□ 0.81
ARHGEF38-IT1-201ENST00000512262 BAZ1BQ9UIG0 1483 aaKnown RBP20.06■□□□□ 0.8
ARHGEF38-IT1-201ENST00000512262 WIZO95785 1651 aa19.89■□□□□ 0.77
ARHGEF38-IT1-201ENST00000512262 RSF1Q96T23 1441 aaPredicted RBP19.89■□□□□ 0.77
ARHGEF38-IT1-201ENST00000512262 NESP48681 1621 aa19.83■□□□□ 0.76
ARHGEF38-IT1-201ENST00000512262 LAMC3Q9Y6N6 1575 aa19.77■□□□□ 0.76
ARHGEF38-IT1-201ENST00000512262 THOC2Q8NI27 1593 aaKnown RBP19.74■□□□□ 0.75
ARHGEF38-IT1-201ENST00000512262 TOP2AP11388 1531 aaKnown RBP19.73■□□□□ 0.75
ARHGEF38-IT1-201ENST00000512262 MAPK8IP2Q13387 824 aaPredicted RBP19.73■□□□□ 0.75
ARHGEF38-IT1-201ENST00000512262 PDS5BQ9NTI5 1447 aa19.68■□□□□ 0.74
ARHGEF38-IT1-201ENST00000512262 CADPSQ9ULU8 1353 aa19.64■□□□□ 0.73
ARHGEF38-IT1-201ENST00000512262 KIF21AQ7Z4S6 1674 aa19.59■□□□□ 0.73
ARHGEF38-IT1-201ENST00000512262 CFTRP13569 1480 aa19.5■□□□□ 0.71
ARHGEF38-IT1-201ENST00000512262 DMRT2Q9Y5R5 561 aa19.5■□□□□ 0.71
ARHGEF38-IT1-201ENST00000512262 TRIM41Q8WV44 630 aa19.49■□□□□ 0.71
ARHGEF38-IT1-201ENST00000512262 MRC2Q9UBG0 1479 aa19.48■□□□□ 0.71
ARHGEF38-IT1-201ENST00000512262 CCDC88BA6NC98 1476 aa19.47■□□□□ 0.71
ARHGEF38-IT1-201ENST00000512262 WDR62O43379 1518 aa19.43■□□□□ 0.7
ARHGEF38-IT1-201ENST00000512262 SCAF1Q9H7N4 1312 aaKnown RBP19.42■□□□□ 0.7
ARHGEF38-IT1-201ENST00000512262 PRDM2Q13029 1718 aa19.39■□□□□ 0.7
ARHGEF38-IT1-201ENST00000512262 FANCD2Q9BXW9 1451 aa19.39■□□□□ 0.69
ARHGEF38-IT1-201ENST00000512262 CEP164Q9UPV0 1460 aa19.39■□□□□ 0.69
ARHGEF38-IT1-201ENST00000512262 SUPT5HO00267 1087 aaKnown RBP19.33■□□□□ 0.68
ARHGEF38-IT1-201ENST00000512262 OSCARQ8IYS5 282 aa19.31■□□□□ 0.68
ARHGEF38-IT1-201ENST00000512262 ABCC8Q09428 1581 aa19.18■□□□□ 0.66
ARHGEF38-IT1-201ENST00000512262 PPP4R3CPQ6ZMV5 832 aa19.16■□□□□ 0.66
ARHGEF38-IT1-201ENST00000512262 URB2Q14146 1524 aaKnown RBP19.15■□□□□ 0.66
ARHGEF38-IT1-201ENST00000512262 DNMBPQ6XZF7 1577 aa19.07■□□□□ 0.64
ARHGEF38-IT1-201ENST00000512262 TOPBP1Q92547 1522 aa19.07■□□□□ 0.64
ARHGEF38-IT1-201ENST00000512262 IFT140Q96RY7 1462 aa19■□□□□ 0.63
ARHGEF38-IT1-201ENST00000512262 RIMBP3CA6NJZ7 1639 aa18.99■□□□□ 0.63
ARHGEF38-IT1-201ENST00000512262 RIMBP3BA6NNM3 1639 aa18.99■□□□□ 0.63
ARHGEF38-IT1-201ENST00000512262 RIMBP3Q9UFD9 1639 aa18.99■□□□□ 0.63
ARHGEF38-IT1-201ENST00000512262 ARHGEF11O15085 1522 aa18.91■□□□□ 0.62
ARHGEF38-IT1-201ENST00000512262 POLA1P09884 1462 aaPredicted RBP18.9■□□□□ 0.62
ARHGEF38-IT1-201ENST00000512262 ZNF608Q9ULD9 1512 aaPredicted RBP18.89■□□□□ 0.61
ARHGEF38-IT1-201ENST00000512262 CUX1P39880 1505 aa18.88■□□□□ 0.61
ARHGEF38-IT1-201ENST00000512262 TARBP1Q13395 1621 aaKnown RBP18.85■□□□□ 0.61
ARHGEF38-IT1-201ENST00000512262 SOGA1O94964 1423 aa18.84■□□□□ 0.61
ARHGEF38-IT1-201ENST00000512262 FGD5Q6ZNL6 1462 aa18.84■□□□□ 0.61
ARHGEF38-IT1-201ENST00000512262 WDR97A6NE52 1622 aa18.82■□□□□ 0.6
ARHGEF38-IT1-201ENST00000512262 CYB5RLQ6IPT4 315 aa18.81■□□□□ 0.6
ARHGEF38-IT1-201ENST00000512262 WRNQ14191 1432 aaPredicted RBP eCLIP18.79■□□□□ 0.6
ARHGEF38-IT1-201ENST00000512262 EIF4G3O43432 1585 aaKnown RBP18.79■□□□□ 0.6
ARHGEF38-IT1-201ENST00000512262 HOXD11P31277 338 aaPredicted RBP18.78■□□□□ 0.6
ARHGEF38-IT1-201ENST00000512262 RAD54L2Q9Y4B4 1467 aa18.77■□□□□ 0.59
ARHGEF38-IT1-201ENST00000512262 TOP2BQ02880 1626 aa18.76■□□□□ 0.59
ARHGEF38-IT1-201ENST00000512262 CNKSR2Q8WXI2 1034 aa18.76■□□□□ 0.59
ARHGEF38-IT1-201ENST00000512262 BIVM-ERCC5R4GMW8 1640 aa18.75■□□□□ 0.59
ARHGEF38-IT1-201ENST00000512262 AQRO60306 1485 aaKnown RBP eCLIP18.72■□□□□ 0.59
ARHGEF38-IT1-201ENST00000512262 CHD1O14646 1710 aa18.72■□□□□ 0.59
ARHGEF38-IT1-201ENST00000512262 TRHP20396 242 aaPredicted RBP18.72■□□□□ 0.59
ARHGEF38-IT1-201ENST00000512262 TDRD9Q8NDG6 1382 aaKnown RBP18.7■□□□□ 0.58
ARHGEF38-IT1-201ENST00000512262 ABCA10Q8WWZ4 1543 aa18.69■□□□□ 0.58
ARHGEF38-IT1-201ENST00000512262 SYNJ1O43426 1573 aa18.68■□□□□ 0.58
ARHGEF38-IT1-201ENST00000512262 ARAP1Q96P48 1450 aa18.68■□□□□ 0.58
ARHGEF38-IT1-201ENST00000512262 FBLN2P98095 1184 aa18.67■□□□□ 0.58
ARHGEF38-IT1-201ENST00000512262 DCAF8L1A6NGE4 600 aa18.65■□□□□ 0.58
ARHGEF38-IT1-201ENST00000512262 GRIN2BQ13224 1484 aa18.65■□□□□ 0.58
ARHGEF38-IT1-201ENST00000512262 GAPVD1Q14C86 1478 aa18.63■□□□□ 0.57
ARHGEF38-IT1-201ENST00000512262 MAGI1Q96QZ7 1491 aaPredicted RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms