RNA–Protein interactions for RNA: ENST00000512238.1

PDK2-214, Transcript of pyruvate dehydrogenase kinase 2, humanhuman

TSL 4

Gene PDK2, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDK2-214ENST00000512238 NISCHQ9Y2I1 1504 aa24.56■■□□□ 1.52
PDK2-214ENST00000512238 CCDC180Q9P1Z9 1646 aa21.69■■□□□ 1.06
PDK2-214ENST00000512238 ABCC9O60706 1549 aa20.99■□□□□ 0.95
PDK2-214ENST00000512238 MYO15BQ96JP2 1530 aa20.51■□□□□ 0.87
PDK2-214ENST00000512238 ZCCHC6Q5VYS8 1495 aaKnown RBP20.48■□□□□ 0.87
PDK2-214ENST00000512238 NACADO15069 1562 aa20.46■□□□□ 0.87
PDK2-214ENST00000512238 DCAF1Q9Y4B6 1507 aa20.44■□□□□ 0.86
PDK2-214ENST00000512238 DCAF8L2P0C7V8 631 aa20.38■□□□□ 0.85
PDK2-214ENST00000512238 RB1CC1Q8TDY2 1594 aa20.38■□□□□ 0.85
PDK2-214ENST00000512238 SHROOM4Q9ULL8 1493 aa19.73■□□□□ 0.75
PDK2-214ENST00000512238 PABPN1Q86U42 306 aaKnown RBP eCLIP19.69■□□□□ 0.74
PDK2-214ENST00000512238 SCRIBQ14160 1630 aa19.68■□□□□ 0.74
PDK2-214ENST00000512238 BICRAQ9NZM4 1560 aa19.67■□□□□ 0.74
PDK2-214ENST00000512238 UNC13AQ9UPW8 1703 aa19.65■□□□□ 0.74
PDK2-214ENST00000512238 EIF4G1Q04637 1599 aaKnown RBP19.18■□□□□ 0.66
PDK2-214ENST00000512238 DNAJC5BQ9UF47 199 aa19.15■□□□□ 0.66
PDK2-214ENST00000512238 BAZ1AQ9NRL2 1556 aaPredicted RBP19.03■□□□□ 0.64
PDK2-214ENST00000512238 CECR2Q9BXF3 1484 aa19.03■□□□□ 0.64
PDK2-214ENST00000512238 CC2D2AQ9P2K1 1620 aa19■□□□□ 0.63
PDK2-214ENST00000512238 SMARCA4P51532 1647 aa18.93■□□□□ 0.62
PDK2-214ENST00000512238 NCAPD3P42695 1498 aa18.93■□□□□ 0.62
PDK2-214ENST00000512238 ATAD2BQ9ULI0 1458 aa18.88■□□□□ 0.61
PDK2-214ENST00000512238 SMARCA2P51531 1590 aa18.88■□□□□ 0.61
PDK2-214ENST00000512238 PEG3Q9GZU2 1588 aa18.86■□□□□ 0.61
PDK2-214ENST00000512238 MROH2BQ7Z745 1585 aa18.85■□□□□ 0.61
PDK2-214ENST00000512238 RSF1Q96T23 1441 aaPredicted RBP18.79■□□□□ 0.6
PDK2-214ENST00000512238 HMGXB3Q12766 1538 aa18.77■□□□□ 0.6
PDK2-214ENST00000512238 BAZ1BQ9UIG0 1483 aaKnown RBP18.71■□□□□ 0.59
PDK2-214ENST00000512238 WIZO95785 1651 aa18.56■□□□□ 0.56
PDK2-214ENST00000512238 TOP2AP11388 1531 aaKnown RBP18.51■□□□□ 0.55
PDK2-214ENST00000512238 SUPT5HO00267 1087 aaKnown RBP18.36■□□□□ 0.53
PDK2-214ENST00000512238 CADPSQ9ULU8 1353 aa18.36■□□□□ 0.53
PDK2-214ENST00000512238 LAMC3Q9Y6N6 1575 aa18.3■□□□□ 0.52
PDK2-214ENST00000512238 CCDC88BA6NC98 1476 aa18.29■□□□□ 0.52
PDK2-214ENST00000512238 CFTRP13569 1480 aa18.27■□□□□ 0.52
PDK2-214ENST00000512238 PDS5BQ9NTI5 1447 aa18.26■□□□□ 0.51
PDK2-214ENST00000512238 NESP48681 1621 aa18.2■□□□□ 0.5
PDK2-214ENST00000512238 ERCC6Q03468 1493 aa18.14■□□□□ 0.5
PDK2-214ENST00000512238 FANCD2Q9BXW9 1451 aa18.07■□□□□ 0.48
PDK2-214ENST00000512238 CEP164Q9UPV0 1460 aa18.03■□□□□ 0.48
PDK2-214ENST00000512238 CUX2O14529 1486 aa17.98■□□□□ 0.47
PDK2-214ENST00000512238 MRC2Q9UBG0 1479 aa17.97■□□□□ 0.47
PDK2-214ENST00000512238 ABCC8Q09428 1581 aa17.94■□□□□ 0.46
PDK2-214ENST00000512238 PRDM2Q13029 1718 aa17.9■□□□□ 0.46
PDK2-214ENST00000512238 WDR62O43379 1518 aa17.89■□□□□ 0.45
PDK2-214ENST00000512238 KIF21AQ7Z4S6 1674 aa17.89■□□□□ 0.45
PDK2-214ENST00000512238 THOC2Q8NI27 1593 aaKnown RBP17.88■□□□□ 0.45
PDK2-214ENST00000512238 URB2Q14146 1524 aaKnown RBP17.82■□□□□ 0.44
PDK2-214ENST00000512238 TOPBP1Q92547 1522 aa17.77■□□□□ 0.44
PDK2-214ENST00000512238 DNMBPQ6XZF7 1577 aa17.77■□□□□ 0.44
PDK2-214ENST00000512238 WRNQ14191 1432 aaPredicted RBP eCLIP17.72■□□□□ 0.43
PDK2-214ENST00000512238 IFT140Q96RY7 1462 aa17.69■□□□□ 0.42
PDK2-214ENST00000512238 CUX1P39880 1505 aa17.67■□□□□ 0.42
PDK2-214ENST00000512238 POLA1P09884 1462 aaPredicted RBP17.65■□□□□ 0.42
PDK2-214ENST00000512238 SOGA1O94964 1423 aa17.63■□□□□ 0.41
PDK2-214ENST00000512238 FGD5Q6ZNL6 1462 aa17.6■□□□□ 0.41
PDK2-214ENST00000512238 TOP2BQ02880 1626 aa17.6■□□□□ 0.41
PDK2-214ENST00000512238 BIVM-ERCC5R4GMW8 1640 aa17.54■□□□□ 0.4
PDK2-214ENST00000512238 WDR97A6NE52 1622 aa17.54■□□□□ 0.4
PDK2-214ENST00000512238 TARBP1Q13395 1621 aaKnown RBP17.53■□□□□ 0.4
PDK2-214ENST00000512238 ABCA10Q8WWZ4 1543 aa17.52■□□□□ 0.39
PDK2-214ENST00000512238 RAD54L2Q9Y4B4 1467 aa17.51■□□□□ 0.39
PDK2-214ENST00000512238 SYNJ1O43426 1573 aa17.51■□□□□ 0.39
PDK2-214ENST00000512238 ZNF608Q9ULD9 1512 aaPredicted RBP17.47■□□□□ 0.39
PDK2-214ENST00000512238 TDRD9Q8NDG6 1382 aaKnown RBP17.46■□□□□ 0.39
PDK2-214ENST00000512238 TRIM41Q8WV44 630 aa17.44■□□□□ 0.38
PDK2-214ENST00000512238 AQRO60306 1485 aaKnown RBP eCLIP17.44■□□□□ 0.38
PDK2-214ENST00000512238 GRIN2BQ13224 1484 aa17.41■□□□□ 0.38
PDK2-214ENST00000512238 GAPVD1Q14C86 1478 aa17.41■□□□□ 0.38
PDK2-214ENST00000512238 KIF27Q86VH2 1401 aa17.38■□□□□ 0.37
PDK2-214ENST00000512238 EIF4G3O43432 1585 aaKnown RBP17.37■□□□□ 0.37
PDK2-214ENST00000512238 MAGI1Q96QZ7 1491 aaPredicted RBP17.35■□□□□ 0.37
PDK2-214ENST00000512238 ABCA5Q8WWZ7 1642 aa17.32■□□□□ 0.36
PDK2-214ENST00000512238 CHIC1Q5VXU3 224 aa17.32■□□□□ 0.36
PDK2-214ENST00000512238 ERICH3Q5RHP9 1530 aa17.31■□□□□ 0.36
PDK2-214ENST00000512238 OSCARQ8IYS5 282 aa17.31■□□□□ 0.36
PDK2-214ENST00000512238 IGF1RP08069 1367 aa17.28■□□□□ 0.36
PDK2-214ENST00000512238 SYNJ2O15056 1496 aa17.27■□□□□ 0.36
PDK2-214ENST00000512238 CHMP7Q8WUX9 453 aaPredicted RBP17.27■□□□□ 0.36
PDK2-214ENST00000512238 SNAPC4Q5SXM2 1469 aa17.26■□□□□ 0.35
PDK2-214ENST00000512238 FHAD1B1AJZ9 1412 aa17.26■□□□□ 0.35
PDK2-214ENST00000512238 DNAJC5Q9H3Z4 198 aa17.25■□□□□ 0.35
PDK2-214ENST00000512238 EEA1Q15075 1411 aa17.22■□□□□ 0.35
PDK2-214ENST00000512238 FBLN2P98095 1184 aa17.2■□□□□ 0.34
PDK2-214ENST00000512238 CARMIL1Q5VZK9 1371 aa17.17■□□□□ 0.34
PDK2-214ENST00000512238 PBRM1Q86U86 1689 aa17.16■□□□□ 0.34
PDK2-214ENST00000512238 GRIN2AQ12879 1464 aa17.15■□□□□ 0.34
PDK2-214ENST00000512238 CSRNP3Q8WYN3 585 aa17.14■□□□□ 0.33
PDK2-214ENST00000512238 ADAMTS12P58397 1594 aa17.14■□□□□ 0.33
PDK2-214ENST00000512238 NUP160Q12769 1436 aa17.12■□□□□ 0.33
PDK2-214ENST00000512238 CUL7Q14999 1698 aa17.11■□□□□ 0.33
PDK2-214ENST00000512238 RUSC2Q8N2Y8 1516 aa17.09■□□□□ 0.33
PDK2-214ENST00000512238 PRXQ9BXM0 1461 aa17.07■□□□□ 0.32
PDK2-214ENST00000512238 RAPGEF2Q9Y4G8 1499 aa17.07■□□□□ 0.32
PDK2-214ENST00000512238 CHD1O14646 1710 aa17.03■□□□□ 0.32
PDK2-214ENST00000512238 CLASP1Q7Z460 1538 aa17.01■□□□□ 0.31
PDK2-214ENST00000512238 KIAA0586Q9BVV6 1533 aa17.01■□□□□ 0.31
PDK2-214ENST00000512238 JPH4Q96JJ6 628 aa16.97■□□□□ 0.31
PDK2-214ENST00000512238 CEP170Q5SW79 1584 aa16.96■□□□□ 0.31
PDK2-214ENST00000512238 FAM9AQ8IZU1 332 aaPredicted RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms