RNA–Protein interactions for RNA: ENST00000512146.6

SNCAIP-216, Transcript of synuclein alpha interacting protein, humanhuman

TSL 5

Gene SNCAIP, Length 1,849 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-216ENST00000512146 NISCHQ9Y2I1 1504 aa32.39■■■□□ 2.78
SNCAIP-216ENST00000512146 CCDC180Q9P1Z9 1646 aa27.9■■■□□ 2.06
SNCAIP-216ENST00000512146 ZCCHC6Q5VYS8 1495 aaKnown RBP27.33■■□□□ 1.97
SNCAIP-216ENST00000512146 DCAF1Q9Y4B6 1507 aa26.8■■□□□ 1.88
SNCAIP-216ENST00000512146 SHROOM4Q9ULL8 1493 aa26.77■■□□□ 1.88
SNCAIP-216ENST00000512146 DCAF8L2P0C7V8 631 aa26.51■■□□□ 1.83
SNCAIP-216ENST00000512146 MYO15BQ96JP2 1530 aa26.28■■□□□ 1.8
SNCAIP-216ENST00000512146 SUPT5HO00267 1087 aaKnown RBP26.04■■□□□ 1.76
SNCAIP-216ENST00000512146 ABCC9O60706 1549 aa25.93■■□□□ 1.74
SNCAIP-216ENST00000512146 NACADO15069 1562 aa25.9■■□□□ 1.74
SNCAIP-216ENST00000512146 SCRIBQ14160 1630 aa25.74■■□□□ 1.71
SNCAIP-216ENST00000512146 RB1CC1Q8TDY2 1594 aa25.51■■□□□ 1.67
SNCAIP-216ENST00000512146 RSF1Q96T23 1441 aaPredicted RBP25.37■■□□□ 1.65
SNCAIP-216ENST00000512146 CHIC1Q5VXU3 224 aa25.28■■□□□ 1.64
SNCAIP-216ENST00000512146 CECR2Q9BXF3 1484 aa25.14■■□□□ 1.62
SNCAIP-216ENST00000512146 MROH2BQ7Z745 1585 aa25.05■■□□□ 1.6
SNCAIP-216ENST00000512146 UNC13AQ9UPW8 1703 aa24.97■■□□□ 1.59
SNCAIP-216ENST00000512146 BAZ1AQ9NRL2 1556 aaPredicted RBP24.93■■□□□ 1.58
SNCAIP-216ENST00000512146 WIZO95785 1651 aa24.81■■□□□ 1.56
SNCAIP-216ENST00000512146 BICRAQ9NZM4 1560 aa24.8■■□□□ 1.56
SNCAIP-216ENST00000512146 SMARCA4P51532 1647 aa24.73■■□□□ 1.55
SNCAIP-216ENST00000512146 PABPN1Q86U42 306 aaKnown RBP eCLIP24.6■■□□□ 1.53
SNCAIP-216ENST00000512146 TOP2AP11388 1531 aaKnown RBP24.6■■□□□ 1.53
SNCAIP-216ENST00000512146 PEG3Q9GZU2 1588 aa24.46■■□□□ 1.51
SNCAIP-216ENST00000512146 TRIM41Q8WV44 630 aa24.45■■□□□ 1.5
SNCAIP-216ENST00000512146 EIF4G1Q04637 1599 aaKnown RBP24.44■■□□□ 1.5
SNCAIP-216ENST00000512146 SMARCA2P51531 1590 aa24.39■■□□□ 1.5
SNCAIP-216ENST00000512146 CCDC88BA6NC98 1476 aa24.39■■□□□ 1.5
SNCAIP-216ENST00000512146 LOC105371045A0A1W2PR82 267 aa24.32■■□□□ 1.48
SNCAIP-216ENST00000512146 ATAD2BQ9ULI0 1458 aa24.25■■□□□ 1.47
SNCAIP-216ENST00000512146 BAZ1BQ9UIG0 1483 aaKnown RBP24.1■■□□□ 1.45
SNCAIP-216ENST00000512146 ABCC8Q09428 1581 aa24.01■■□□□ 1.43
SNCAIP-216ENST00000512146 FAM9AQ8IZU1 332 aaPredicted RBP24■■□□□ 1.43
SNCAIP-216ENST00000512146 NCAPD3P42695 1498 aa23.96■■□□□ 1.43
SNCAIP-216ENST00000512146 HMGXB3Q12766 1538 aa23.92■■□□□ 1.42
SNCAIP-216ENST00000512146 WRNQ14191 1432 aaPredicted RBP eCLIP23.83■■□□□ 1.41
SNCAIP-216ENST00000512146 EEA1Q15075 1411 aa23.78■■□□□ 1.4
SNCAIP-216ENST00000512146 PCGF6Q9BYE7 350 aa23.76■■□□□ 1.39
SNCAIP-216ENST00000512146 SOGA1O94964 1423 aa23.73■■□□□ 1.39
SNCAIP-216ENST00000512146 SYNJ1O43426 1573 aa23.69■■□□□ 1.38
SNCAIP-216ENST00000512146 TRIM26Q12899 539 aaPredicted RBP23.64■■□□□ 1.38
SNCAIP-216ENST00000512146 CSRNP3Q8WYN3 585 aa23.61■■□□□ 1.37
SNCAIP-216ENST00000512146 RUSC2Q8N2Y8 1516 aa23.6■■□□□ 1.37
SNCAIP-216ENST00000512146 EHMT2Q96KQ7 1210 aa23.6■■□□□ 1.37
SNCAIP-216ENST00000512146 HRCP23327 699 aa23.58■■□□□ 1.37
SNCAIP-216ENST00000512146 CFTRP13569 1480 aa23.58■■□□□ 1.36
SNCAIP-216ENST00000512146 TOP2BQ02880 1626 aa23.54■■□□□ 1.36
SNCAIP-216ENST00000512146 TNIKQ9UKE5 1360 aa23.54■■□□□ 1.36
SNCAIP-216ENST00000512146 BIVM-ERCC5R4GMW8 1640 aa23.49■■□□□ 1.35
SNCAIP-216ENST00000512146 GOLGA3Q08378 1498 aa23.46■■□□□ 1.35
SNCAIP-216ENST00000512146 CC2D2AQ9P2K1 1620 aa23.46■■□□□ 1.35
SNCAIP-216ENST00000512146 CEP162Q5TB80 1403 aa23.42■■□□□ 1.34
SNCAIP-216ENST00000512146 KIF21BO75037 1637 aa23.41■■□□□ 1.34
SNCAIP-216ENST00000512146 CEP164Q9UPV0 1460 aa23.41■■□□□ 1.34
SNCAIP-216ENST00000512146 CUX1P39880 1505 aa23.38■■□□□ 1.33
SNCAIP-216ENST00000512146 CADPSQ9ULU8 1353 aa23.37■■□□□ 1.33
SNCAIP-216ENST00000512146 PRDM2Q13029 1718 aa23.32■■□□□ 1.32
SNCAIP-216ENST00000512146 UBTFP17480 764 aaKnown RBP23.31■■□□□ 1.32
SNCAIP-216ENST00000512146 RAPGEF2Q9Y4G8 1499 aa23.21■■□□□ 1.31
SNCAIP-216ENST00000512146 PRXQ9BXM0 1461 aa23.2■■□□□ 1.3
SNCAIP-216ENST00000512146 KIF27Q86VH2 1401 aa23.17■■□□□ 1.3
SNCAIP-216ENST00000512146 ERICH3Q5RHP9 1530 aa23.17■■□□□ 1.3
SNCAIP-216ENST00000512146 CLIP1P30622 1438 aa23.12■■□□□ 1.29
SNCAIP-216ENST00000512146 FANCD2Q9BXW9 1451 aa23.09■■□□□ 1.29
SNCAIP-216ENST00000512146 PPARGC1BQ86YN6 1023 aaKnown RBP23.08■■□□□ 1.28
SNCAIP-216ENST00000512146 FGD5Q6ZNL6 1462 aa23.01■■□□□ 1.27
SNCAIP-216ENST00000512146 VPS8Q8N3P4 1428 aa23■■□□□ 1.27
SNCAIP-216ENST00000512146 LAMC3Q9Y6N6 1575 aa22.98■■□□□ 1.27
SNCAIP-216ENST00000512146 ZEB1P37275 1124 aaPredicted RBP22.98■■□□□ 1.27
SNCAIP-216ENST00000512146 CUX2O14529 1486 aa22.97■■□□□ 1.27
SNCAIP-216ENST00000512146 DNMBPQ6XZF7 1577 aa22.96■■□□□ 1.27
SNCAIP-216ENST00000512146 IGF1RP08069 1367 aa22.96■■□□□ 1.27
SNCAIP-216ENST00000512146 NESP48681 1621 aa22.96■■□□□ 1.27
SNCAIP-216ENST00000512146 TOPBP1Q92547 1522 aa22.9■■□□□ 1.26
SNCAIP-216ENST00000512146 ABCA10Q8WWZ4 1543 aa22.85■■□□□ 1.25
SNCAIP-216ENST00000512146 POLA1P09884 1462 aaPredicted RBP22.84■■□□□ 1.25
SNCAIP-216ENST00000512146 ARAP1Q96P48 1450 aa22.83■■□□□ 1.25
SNCAIP-216ENST00000512146 CARMIL1Q5VZK9 1371 aa22.82■■□□□ 1.24
SNCAIP-216ENST00000512146 DNAJC5BQ9UF47 199 aa22.81■■□□□ 1.24
SNCAIP-216ENST00000512146 PDS5BQ9NTI5 1447 aa22.81■■□□□ 1.24
SNCAIP-216ENST00000512146 URB2Q14146 1524 aaKnown RBP22.78■■□□□ 1.24
SNCAIP-216ENST00000512146 RAD54L2Q9Y4B4 1467 aa22.77■■□□□ 1.24
SNCAIP-216ENST00000512146 TTBK1Q5TCY1 1321 aaPredicted RBP22.74■■□□□ 1.23
SNCAIP-216ENST00000512146 ARHGAP35Q9NRY4 1499 aa22.73■■□□□ 1.23
SNCAIP-216ENST00000512146 RANGAP1P46060 587 aaPredicted RBP22.73■■□□□ 1.23
SNCAIP-216ENST00000512146 APLP2Q06481 763 aa22.71■■□□□ 1.23
SNCAIP-216ENST00000512146 WDR97A6NE52 1622 aa22.66■■□□□ 1.22
SNCAIP-216ENST00000512146 CUL7Q14999 1698 aa22.62■■□□□ 1.21
SNCAIP-216ENST00000512146 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.61■■□□□ 1.21
SNCAIP-216ENST00000512146 KIF21AQ7Z4S6 1674 aa22.6■■□□□ 1.21
SNCAIP-216ENST00000512146 ABCA5Q8WWZ7 1642 aa22.58■■□□□ 1.21
SNCAIP-216ENST00000512146 CCER1Q8TC90 406 aaPredicted RBP22.58■■□□□ 1.21
SNCAIP-216ENST00000512146 MAP3K1Q13233 1512 aa22.52■■□□□ 1.2
SNCAIP-216ENST00000512146 GAPVD1Q14C86 1478 aa22.52■■□□□ 1.2
SNCAIP-216ENST00000512146 TDRD9Q8NDG6 1382 aaKnown RBP22.51■■□□□ 1.19
SNCAIP-216ENST00000512146 KANK4Q5T7N3 995 aaPredicted RBP22.51■■□□□ 1.19
SNCAIP-216ENST00000512146 TARBP1Q13395 1621 aaKnown RBP22.51■■□□□ 1.19
SNCAIP-216ENST00000512146 MRC2Q9UBG0 1479 aa22.48■■□□□ 1.19
SNCAIP-216ENST00000512146 EFCAB5A4FU69 1503 aa22.46■■□□□ 1.19
SNCAIP-216ENST00000512146 FHAD1B1AJZ9 1412 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms