RNA–Protein interactions for RNA: ENST00000510995.1

ZFYVE16-207, Transcript of zinc finger FYVE-type containing 16, humanhuman

TSL 1 (best)

Gene ZFYVE16, Length 2,873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE16-207ENST00000510995 NISCHQ9Y2I1 1504 aa10.02□□□□□ -0.81
ZFYVE16-207ENST00000510995 AEBP2Q6ZN18 517 aaPredicted RBP9.54□□□□□ -0.88
ZFYVE16-207ENST00000510995 CHIC1Q5VXU3 224 aa9.33□□□□□ -0.92
ZFYVE16-207ENST00000510995 ABCC9O60706 1549 aa8.86□□□□□ -0.99
ZFYVE16-207ENST00000510995 CCDC180Q9P1Z9 1646 aa8.78□□□□□ -1
ZFYVE16-207ENST00000510995 DCAF8L2P0C7V8 631 aa8.68□□□□□ -1.02
ZFYVE16-207ENST00000510995 RB1CC1Q8TDY2 1594 aa8.39□□□□□ -1.07
ZFYVE16-207ENST00000510995 PABPN1Q86U42 306 aaKnown RBP eCLIP8.38□□□□□ -1.07
ZFYVE16-207ENST00000510995 NACADO15069 1562 aa8.36□□□□□ -1.07
ZFYVE16-207ENST00000510995 ZCCHC6Q5VYS8 1495 aaKnown RBP8.3□□□□□ -1.08
ZFYVE16-207ENST00000510995 MYO15BQ96JP2 1530 aa8.26□□□□□ -1.09
ZFYVE16-207ENST00000510995 DNAJC5BQ9UF47 199 aa8.25□□□□□ -1.09
ZFYVE16-207ENST00000510995 DCAF1Q9Y4B6 1507 aa8.22□□□□□ -1.09
ZFYVE16-207ENST00000510995 PHF23Q9BUL5 403 aaPredicted RBP8.2□□□□□ -1.1
ZFYVE16-207ENST00000510995 SCRIBQ14160 1630 aa8.13□□□□□ -1.11
ZFYVE16-207ENST00000510995 BICRAQ9NZM4 1560 aa8.12□□□□□ -1.11
ZFYVE16-207ENST00000510995 SENP3Q9H4L4 574 aaPredicted RBP8.09□□□□□ -1.11
ZFYVE16-207ENST00000510995 UNC13AQ9UPW8 1703 aa8.07□□□□□ -1.12
ZFYVE16-207ENST00000510995 SHROOM4Q9ULL8 1493 aa8.06□□□□□ -1.12
ZFYVE16-207ENST00000510995 CECR2Q9BXF3 1484 aa7.94□□□□□ -1.14
ZFYVE16-207ENST00000510995 EIF4G1Q04637 1599 aaKnown RBP7.94□□□□□ -1.14
ZFYVE16-207ENST00000510995 CC2D2AQ9P2K1 1620 aa7.92□□□□□ -1.14
ZFYVE16-207ENST00000510995 ATAD2BQ9ULI0 1458 aa7.78□□□□□ -1.16
ZFYVE16-207ENST00000510995 NCAPD3P42695 1498 aa7.78□□□□□ -1.16
ZFYVE16-207ENST00000510995 BAZ1AQ9NRL2 1556 aaPredicted RBP7.75□□□□□ -1.17
ZFYVE16-207ENST00000510995 MROH2BQ7Z745 1585 aa7.74□□□□□ -1.17
ZFYVE16-207ENST00000510995 SMARCA4P51532 1647 aa7.73□□□□□ -1.17
ZFYVE16-207ENST00000510995 SMARCA2P51531 1590 aa7.72□□□□□ -1.17
ZFYVE16-207ENST00000510995 BAZ1BQ9UIG0 1483 aaKnown RBP7.72□□□□□ -1.17
ZFYVE16-207ENST00000510995 RSF1Q96T23 1441 aaPredicted RBP7.67□□□□□ -1.18
ZFYVE16-207ENST00000510995 HMGXB3Q12766 1538 aa7.65□□□□□ -1.18
ZFYVE16-207ENST00000510995 ERCC6Q03468 1493 aa7.64□□□□□ -1.19
ZFYVE16-207ENST00000510995 NESP48681 1621 aa7.63□□□□□ -1.19
ZFYVE16-207ENST00000510995 PEG3Q9GZU2 1588 aa7.63□□□□□ -1.19
ZFYVE16-207ENST00000510995 SUPT5HO00267 1087 aaKnown RBP7.62□□□□□ -1.19
ZFYVE16-207ENST00000510995 WIZO95785 1651 aa7.62□□□□□ -1.19
ZFYVE16-207ENST00000510995 POTEDQ86YR6 584 aa7.61□□□□□ -1.19
ZFYVE16-207ENST00000510995 CADPSQ9ULU8 1353 aa7.6□□□□□ -1.19
ZFYVE16-207ENST00000510995 PDS5BQ9NTI5 1447 aa7.57□□□□□ -1.2
ZFYVE16-207ENST00000510995 PLPPR3Q6T4P5 718 aa7.56□□□□□ -1.2
ZFYVE16-207ENST00000510995 TOP2AP11388 1531 aaKnown RBP7.52□□□□□ -1.21
ZFYVE16-207ENST00000510995 LAMC3Q9Y6N6 1575 aa7.51□□□□□ -1.21
ZFYVE16-207ENST00000510995 CCDC88BA6NC98 1476 aa7.51□□□□□ -1.21
ZFYVE16-207ENST00000510995 FOXD1Q16676 465 aa7.5□□□□□ -1.21
ZFYVE16-207ENST00000510995 CUX2O14529 1486 aa7.49□□□□□ -1.21
ZFYVE16-207ENST00000510995 CFTRP13569 1480 aa7.49□□□□□ -1.21
ZFYVE16-207ENST00000510995 FANCD2Q9BXW9 1451 aa7.48□□□□□ -1.21
ZFYVE16-207ENST00000510995 DNAJC5Q9H3Z4 198 aa7.46□□□□□ -1.22
ZFYVE16-207ENST00000510995 CEP164Q9UPV0 1460 aa7.46□□□□□ -1.22
ZFYVE16-207ENST00000510995 MRC2Q9UBG0 1479 aa7.44□□□□□ -1.22
ZFYVE16-207ENST00000510995 KIF21AQ7Z4S6 1674 aa7.41□□□□□ -1.22
ZFYVE16-207ENST00000510995 THOC2Q8NI27 1593 aaKnown RBP7.39□□□□□ -1.23
ZFYVE16-207ENST00000510995 URB2Q14146 1524 aaKnown RBP7.37□□□□□ -1.23
ZFYVE16-207ENST00000510995 WDR62O43379 1518 aa7.36□□□□□ -1.23
ZFYVE16-207ENST00000510995 FBLN2P98095 1184 aa7.34□□□□□ -1.23
ZFYVE16-207ENST00000510995 OSCARQ8IYS5 282 aa7.34□□□□□ -1.23
ZFYVE16-207ENST00000510995 ABCC8Q09428 1581 aa7.33□□□□□ -1.24
ZFYVE16-207ENST00000510995 TOPBP1Q92547 1522 aa7.33□□□□□ -1.24
ZFYVE16-207ENST00000510995 SOGA1O94964 1423 aa7.31□□□□□ -1.24
ZFYVE16-207ENST00000510995 TDRD9Q8NDG6 1382 aaKnown RBP7.31□□□□□ -1.24
ZFYVE16-207ENST00000510995 IFT140Q96RY7 1462 aa7.3□□□□□ -1.24
ZFYVE16-207ENST00000510995 ZNF608Q9ULD9 1512 aaPredicted RBP7.3□□□□□ -1.24
ZFYVE16-207ENST00000510995 AQRO60306 1485 aaKnown RBP eCLIP7.3□□□□□ -1.24
ZFYVE16-207ENST00000510995 RAD54L2Q9Y4B4 1467 aa7.29□□□□□ -1.24
ZFYVE16-207ENST00000510995 POLA1P09884 1462 aaPredicted RBP7.27□□□□□ -1.25
ZFYVE16-207ENST00000510995 DNMBPQ6XZF7 1577 aa7.27□□□□□ -1.25
ZFYVE16-207ENST00000510995 CHMP7Q8WUX9 453 aaPredicted RBP7.27□□□□□ -1.25
ZFYVE16-207ENST00000510995 TRIM41Q8WV44 630 aa7.27□□□□□ -1.25
ZFYVE16-207ENST00000510995 FGD5Q6ZNL6 1462 aa7.25□□□□□ -1.25
ZFYVE16-207ENST00000510995 WRNQ14191 1432 aaPredicted RBP eCLIP7.25□□□□□ -1.25
ZFYVE16-207ENST00000510995 CUX1P39880 1505 aa7.24□□□□□ -1.25
ZFYVE16-207ENST00000510995 PPP6R1Q9UPN7 881 aa7.22□□□□□ -1.25
ZFYVE16-207ENST00000510995 PRDM2Q13029 1718 aa7.21□□□□□ -1.26
ZFYVE16-207ENST00000510995 ADRA2BP18089 450 aa7.2□□□□□ -1.26
ZFYVE16-207ENST00000510995 CYB5RLQ6IPT4 315 aa7.2□□□□□ -1.26
ZFYVE16-207ENST00000510995 GAPVD1Q14C86 1478 aa7.18□□□□□ -1.26
ZFYVE16-207ENST00000510995 TARBP1Q13395 1621 aaKnown RBP7.18□□□□□ -1.26
ZFYVE16-207ENST00000510995 GRIN2BQ13224 1484 aa7.18□□□□□ -1.26
ZFYVE16-207ENST00000510995 SNAPC4Q5SXM2 1469 aa7.17□□□□□ -1.26
ZFYVE16-207ENST00000510995 EIF4G3O43432 1585 aaKnown RBP7.17□□□□□ -1.26
ZFYVE16-207ENST00000510995 ABCA10Q8WWZ4 1543 aa7.16□□□□□ -1.26
ZFYVE16-207ENST00000510995 SYNJ1O43426 1573 aa7.14□□□□□ -1.27
ZFYVE16-207ENST00000510995 TOP2BQ02880 1626 aa7.13□□□□□ -1.27
ZFYVE16-207ENST00000510995 MAGI1Q96QZ7 1491 aaPredicted RBP7.13□□□□□ -1.27
ZFYVE16-207ENST00000510995 SYNJ2O15056 1496 aa7.12□□□□□ -1.27
ZFYVE16-207ENST00000510995 IGF1RP08069 1367 aa7.11□□□□□ -1.27
ZFYVE16-207ENST00000510995 KIF27Q86VH2 1401 aa7.11□□□□□ -1.27
ZFYVE16-207ENST00000510995 JPH4Q96JJ6 628 aa7.1□□□□□ -1.27
ZFYVE16-207ENST00000510995 FHAD1B1AJZ9 1412 aa7.1□□□□□ -1.27
ZFYVE16-207ENST00000510995 TRHP20396 242 aaPredicted RBP7.09□□□□□ -1.27
ZFYVE16-207ENST00000510995 ARHGEF11O15085 1522 aa7.08□□□□□ -1.28
ZFYVE16-207ENST00000510995 BIVM-ERCC5R4GMW8 1640 aa7.08□□□□□ -1.28
ZFYVE16-207ENST00000510995 TTBK1Q5TCY1 1321 aaPredicted RBP7.08□□□□□ -1.28
ZFYVE16-207ENST00000510995 FAM9AQ8IZU1 332 aaPredicted RBP7.08□□□□□ -1.28
ZFYVE16-207ENST00000510995 WDR97A6NE52 1622 aa7.07□□□□□ -1.28
ZFYVE16-207ENST00000510995 CARMIL1Q5VZK9 1371 aa7.07□□□□□ -1.28
ZFYVE16-207ENST00000510995 GRIN2AQ12879 1464 aa7.07□□□□□ -1.28
ZFYVE16-207ENST00000510995 PIAS4Q8N2W9 510 aaPredicted RBP7.06□□□□□ -1.28
ZFYVE16-207ENST00000510995 ABCA5Q8WWZ7 1642 aa7.05□□□□□ -1.28
ZFYVE16-207ENST00000510995 CHD1O14646 1710 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms