RNA–Protein interactions for RNA: ENST00000509587.1

MBD4-207, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 3

Gene MBD4, Length 643 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-207ENST00000509587 NISCHQ9Y2I1 1504 aa41.98■■■■■ 4.31
MBD4-207ENST00000509587 CCDC180Q9P1Z9 1646 aa37.14■■■■□ 3.54
MBD4-207ENST00000509587 ABCC9O60706 1549 aa36.13■■■■□ 3.37
MBD4-207ENST00000509587 ZCCHC6Q5VYS8 1495 aaKnown RBP35.03■■■■□ 3.2
MBD4-207ENST00000509587 DCAF8L2P0C7V8 631 aa34.94■■■■□ 3.18
MBD4-207ENST00000509587 NACADO15069 1562 aa34.9■■■■□ 3.18
MBD4-207ENST00000509587 RB1CC1Q8TDY2 1594 aa34.85■■■■□ 3.17
MBD4-207ENST00000509587 MYO15BQ96JP2 1530 aa34.81■■■■□ 3.16
MBD4-207ENST00000509587 DCAF1Q9Y4B6 1507 aa34.76■■■■□ 3.16
MBD4-207ENST00000509587 UNC13AQ9UPW8 1703 aa34.01■■■■□ 3.03
MBD4-207ENST00000509587 SCRIBQ14160 1630 aa33.91■■■■□ 3.02
MBD4-207ENST00000509587 PABPN1Q86U42 306 aaKnown RBP eCLIP33.83■■■■□ 3.01
MBD4-207ENST00000509587 BICRAQ9NZM4 1560 aa33.82■■■■□ 3
MBD4-207ENST00000509587 SHROOM4Q9ULL8 1493 aa33.49■■■□□ 2.95
MBD4-207ENST00000509587 DNAJC5BQ9UF47 199 aa33■■■□□ 2.87
MBD4-207ENST00000509587 EIF4G1Q04637 1599 aaKnown RBP32.89■■■□□ 2.86
MBD4-207ENST00000509587 CECR2Q9BXF3 1484 aa32.69■■■□□ 2.82
MBD4-207ENST00000509587 CC2D2AQ9P2K1 1620 aa32.68■■■□□ 2.82
MBD4-207ENST00000509587 BAZ1AQ9NRL2 1556 aaPredicted RBP32.49■■■□□ 2.79
MBD4-207ENST00000509587 SMARCA4P51532 1647 aa32.48■■■□□ 2.79
MBD4-207ENST00000509587 MROH2BQ7Z745 1585 aa32.36■■■□□ 2.77
MBD4-207ENST00000509587 ATAD2BQ9ULI0 1458 aa32.29■■■□□ 2.76
MBD4-207ENST00000509587 NCAPD3P42695 1498 aa32.24■■■□□ 2.75
MBD4-207ENST00000509587 SMARCA2P51531 1590 aa32.22■■■□□ 2.75
MBD4-207ENST00000509587 PEG3Q9GZU2 1588 aa32.2■■■□□ 2.75
MBD4-207ENST00000509587 RSF1Q96T23 1441 aaPredicted RBP32.11■■■□□ 2.73
MBD4-207ENST00000509587 HMGXB3Q12766 1538 aa32.06■■■□□ 2.72
MBD4-207ENST00000509587 BAZ1BQ9UIG0 1483 aaKnown RBP32■■■□□ 2.71
MBD4-207ENST00000509587 WIZO95785 1651 aa31.98■■■□□ 2.71
MBD4-207ENST00000509587 TOP2AP11388 1531 aaKnown RBP31.68■■■□□ 2.66
MBD4-207ENST00000509587 SUPT5HO00267 1087 aaKnown RBP31.46■■■□□ 2.63
MBD4-207ENST00000509587 NESP48681 1621 aa31.35■■■□□ 2.61
MBD4-207ENST00000509587 CCDC88BA6NC98 1476 aa31.33■■■□□ 2.61
MBD4-207ENST00000509587 CADPSQ9ULU8 1353 aa31.3■■■□□ 2.6
MBD4-207ENST00000509587 LAMC3Q9Y6N6 1575 aa31.3■■■□□ 2.6
MBD4-207ENST00000509587 CFTRP13569 1480 aa31.18■■■□□ 2.58
MBD4-207ENST00000509587 PDS5BQ9NTI5 1447 aa31.1■■■□□ 2.57
MBD4-207ENST00000509587 ERCC6Q03468 1493 aa31.09■■■□□ 2.57
MBD4-207ENST00000509587 FANCD2Q9BXW9 1451 aa30.93■■■□□ 2.54
MBD4-207ENST00000509587 KIF21AQ7Z4S6 1674 aa30.92■■■□□ 2.54
MBD4-207ENST00000509587 CEP164Q9UPV0 1460 aa30.84■■■□□ 2.53
MBD4-207ENST00000509587 PRDM2Q13029 1718 aa30.84■■■□□ 2.53
MBD4-207ENST00000509587 THOC2Q8NI27 1593 aaKnown RBP30.79■■■□□ 2.52
MBD4-207ENST00000509587 MRC2Q9UBG0 1479 aa30.76■■■□□ 2.51
MBD4-207ENST00000509587 CUX2O14529 1486 aa30.7■■■□□ 2.5
MBD4-207ENST00000509587 WDR62O43379 1518 aa30.65■■■□□ 2.5
MBD4-207ENST00000509587 URB2Q14146 1524 aaKnown RBP30.61■■■□□ 2.49
MBD4-207ENST00000509587 ABCC8Q09428 1581 aa30.47■■■□□ 2.47
MBD4-207ENST00000509587 TOPBP1Q92547 1522 aa30.46■■■□□ 2.47
MBD4-207ENST00000509587 DNMBPQ6XZF7 1577 aa30.42■■■□□ 2.46
MBD4-207ENST00000509587 CUX1P39880 1505 aa30.33■■■□□ 2.45
MBD4-207ENST00000509587 WRNQ14191 1432 aaPredicted RBP eCLIP30.24■■■□□ 2.43
MBD4-207ENST00000509587 POLA1P09884 1462 aaPredicted RBP30.22■■■□□ 2.43
MBD4-207ENST00000509587 IFT140Q96RY7 1462 aa30.2■■■□□ 2.43
MBD4-207ENST00000509587 FGD5Q6ZNL6 1462 aa30.18■■■□□ 2.42
MBD4-207ENST00000509587 SYNJ1O43426 1573 aa30.13■■■□□ 2.41
MBD4-207ENST00000509587 TOP2BQ02880 1626 aa30.12■■■□□ 2.41
MBD4-207ENST00000509587 SOGA1O94964 1423 aa30.11■■■□□ 2.41
MBD4-207ENST00000509587 TARBP1Q13395 1621 aaKnown RBP30.1■■■□□ 2.41
MBD4-207ENST00000509587 BIVM-ERCC5R4GMW8 1640 aa30.1■■■□□ 2.41
MBD4-207ENST00000509587 RAD54L2Q9Y4B4 1467 aa30.09■■■□□ 2.41
MBD4-207ENST00000509587 ZNF608Q9ULD9 1512 aaPredicted RBP30.06■■■□□ 2.4
MBD4-207ENST00000509587 AQRO60306 1485 aaKnown RBP eCLIP29.92■■■□□ 2.38
MBD4-207ENST00000509587 ABCA10Q8WWZ4 1543 aa29.91■■■□□ 2.38
MBD4-207ENST00000509587 TDRD9Q8NDG6 1382 aaKnown RBP29.91■■■□□ 2.38
MBD4-207ENST00000509587 EIF4G3O43432 1585 aaKnown RBP29.9■■■□□ 2.38
MBD4-207ENST00000509587 WDR97A6NE52 1622 aa29.88■■■□□ 2.37
MBD4-207ENST00000509587 GAPVD1Q14C86 1478 aa29.76■■■□□ 2.35
MBD4-207ENST00000509587 ABCA5Q8WWZ7 1642 aa29.74■■■□□ 2.35
MBD4-207ENST00000509587 GRIN2BQ13224 1484 aa29.72■■■□□ 2.35
MBD4-207ENST00000509587 TRIM41Q8WV44 630 aa29.71■■■□□ 2.35
MBD4-207ENST00000509587 SNAPC4Q5SXM2 1469 aa29.62■■■□□ 2.33
MBD4-207ENST00000509587 MAGI1Q96QZ7 1491 aaPredicted RBP29.61■■■□□ 2.33
MBD4-207ENST00000509587 PBRM1Q86U86 1689 aa29.6■■■□□ 2.33
MBD4-207ENST00000509587 KIF27Q86VH2 1401 aa29.58■■■□□ 2.33
MBD4-207ENST00000509587 ERICH3Q5RHP9 1530 aa29.55■■■□□ 2.32
MBD4-207ENST00000509587 CHIC1Q5VXU3 224 aa29.55■■■□□ 2.32
MBD4-207ENST00000509587 OSCARQ8IYS5 282 aa29.5■■■□□ 2.31
MBD4-207ENST00000509587 DNAJC5Q9H3Z4 198 aa29.5■■■□□ 2.31
MBD4-207ENST00000509587 SYNJ2O15056 1496 aa29.49■■■□□ 2.31
MBD4-207ENST00000509587 FBLN2P98095 1184 aa29.48■■■□□ 2.31
MBD4-207ENST00000509587 IGF1RP08069 1367 aa29.48■■■□□ 2.31
MBD4-207ENST00000509587 CHMP7Q8WUX9 453 aaPredicted RBP29.46■■■□□ 2.31
MBD4-207ENST00000509587 FHAD1B1AJZ9 1412 aa29.44■■■□□ 2.3
MBD4-207ENST00000509587 ADAMTS12P58397 1594 aa29.43■■■□□ 2.3
MBD4-207ENST00000509587 CHD1O14646 1710 aa29.43■■■□□ 2.3
MBD4-207ENST00000509587 RUSC2Q8N2Y8 1516 aa29.42■■■□□ 2.3
MBD4-207ENST00000509587 GRIN2AQ12879 1464 aa29.34■■■□□ 2.29
MBD4-207ENST00000509587 CUL7Q14999 1698 aa29.29■■■□□ 2.28
MBD4-207ENST00000509587 CARMIL1Q5VZK9 1371 aa29.27■■■□□ 2.28
MBD4-207ENST00000509587 NUP160Q12769 1436 aa29.22■■■□□ 2.27
MBD4-207ENST00000509587 CLASP1Q7Z460 1538 aa29.2■■■□□ 2.26
MBD4-207ENST00000509587 EEA1Q15075 1411 aa29.2■■■□□ 2.26
MBD4-207ENST00000509587 CEP170Q5SW79 1584 aa29.17■■■□□ 2.26
MBD4-207ENST00000509587 CSRNP3Q8WYN3 585 aa29.15■■■□□ 2.26
MBD4-207ENST00000509587 RAPGEF2Q9Y4G8 1499 aa29.12■■■□□ 2.25
MBD4-207ENST00000509587 PRXQ9BXM0 1461 aa29.11■■■□□ 2.25
MBD4-207ENST00000509587 FAM9AQ8IZU1 332 aaPredicted RBP29.06■■■□□ 2.24
MBD4-207ENST00000509587 ARHGEF11O15085 1522 aa28.99■■■□□ 2.23
MBD4-207ENST00000509587 KIAA0586Q9BVV6 1533 aa28.99■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms