RNA–Protein interactions for RNA: ENST00000509265.1

LINC00461-209, long intergenic non-protein coding RNA 461, humanhuman

TSL 4

Gene LINC00461, Length 581 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00461-209ENST00000509265 NISCHQ9Y2I1 1504 aa26■■□□□ 1.75
LINC00461-209ENST00000509265 CCDC180Q9P1Z9 1646 aa23■■□□□ 1.27
LINC00461-209ENST00000509265 ABCC9O60706 1549 aa22.25■■□□□ 1.15
LINC00461-209ENST00000509265 ZCCHC6Q5VYS8 1495 aaKnown RBP21.69■■□□□ 1.06
LINC00461-209ENST00000509265 DCAF8L2P0C7V8 631 aa21.65■■□□□ 1.06
LINC00461-209ENST00000509265 NACADO15069 1562 aa21.6■■□□□ 1.05
LINC00461-209ENST00000509265 MYO15BQ96JP2 1530 aa21.58■■□□□ 1.04
LINC00461-209ENST00000509265 DCAF1Q9Y4B6 1507 aa21.55■■□□□ 1.04
LINC00461-209ENST00000509265 RB1CC1Q8TDY2 1594 aa21.54■■□□□ 1.04
LINC00461-209ENST00000509265 UNC13AQ9UPW8 1703 aa21.01■□□□□ 0.95
LINC00461-209ENST00000509265 SCRIBQ14160 1630 aa20.95■□□□□ 0.94
LINC00461-209ENST00000509265 PABPN1Q86U42 306 aaKnown RBP eCLIP20.86■□□□□ 0.93
LINC00461-209ENST00000509265 BICRAQ9NZM4 1560 aa20.85■□□□□ 0.93
LINC00461-209ENST00000509265 SHROOM4Q9ULL8 1493 aa20.72■□□□□ 0.91
LINC00461-209ENST00000509265 EIF4G1Q04637 1599 aaKnown RBP20.29■□□□□ 0.84
LINC00461-209ENST00000509265 DNAJC5BQ9UF47 199 aa20.24■□□□□ 0.83
LINC00461-209ENST00000509265 CECR2Q9BXF3 1484 aa20.2■□□□□ 0.82
LINC00461-209ENST00000509265 CC2D2AQ9P2K1 1620 aa20.14■□□□□ 0.81
LINC00461-209ENST00000509265 BAZ1AQ9NRL2 1556 aaPredicted RBP20.14■□□□□ 0.81
LINC00461-209ENST00000509265 SMARCA4P51532 1647 aa20.1■□□□□ 0.81
LINC00461-209ENST00000509265 MROH2BQ7Z745 1585 aa20.01■□□□□ 0.79
LINC00461-209ENST00000509265 ATAD2BQ9ULI0 1458 aa19.96■□□□□ 0.79
LINC00461-209ENST00000509265 SMARCA2P51531 1590 aa19.95■□□□□ 0.78
LINC00461-209ENST00000509265 NCAPD3P42695 1498 aa19.95■□□□□ 0.78
LINC00461-209ENST00000509265 PEG3Q9GZU2 1588 aa19.93■□□□□ 0.78
LINC00461-209ENST00000509265 RSF1Q96T23 1441 aaPredicted RBP19.91■□□□□ 0.78
LINC00461-209ENST00000509265 HMGXB3Q12766 1538 aa19.82■□□□□ 0.76
LINC00461-209ENST00000509265 WIZO95785 1651 aa19.8■□□□□ 0.76
LINC00461-209ENST00000509265 BAZ1BQ9UIG0 1483 aaKnown RBP19.79■□□□□ 0.76
LINC00461-209ENST00000509265 TOP2AP11388 1531 aaKnown RBP19.62■□□□□ 0.73
LINC00461-209ENST00000509265 SUPT5HO00267 1087 aaKnown RBP19.58■□□□□ 0.72
LINC00461-209ENST00000509265 CCDC88BA6NC98 1476 aa19.41■□□□□ 0.7
LINC00461-209ENST00000509265 CADPSQ9ULU8 1353 aa19.37■□□□□ 0.69
LINC00461-209ENST00000509265 LAMC3Q9Y6N6 1575 aa19.35■□□□□ 0.69
LINC00461-209ENST00000509265 NESP48681 1621 aa19.32■□□□□ 0.68
LINC00461-209ENST00000509265 CFTRP13569 1480 aa19.29■□□□□ 0.68
LINC00461-209ENST00000509265 PDS5BQ9NTI5 1447 aa19.25■□□□□ 0.67
LINC00461-209ENST00000509265 ERCC6Q03468 1493 aa19.17■□□□□ 0.66
LINC00461-209ENST00000509265 PRDM2Q13029 1718 aa19.12■□□□□ 0.65
LINC00461-209ENST00000509265 FANCD2Q9BXW9 1451 aa19.11■□□□□ 0.65
LINC00461-209ENST00000509265 KIF21AQ7Z4S6 1674 aa19.08■□□□□ 0.65
LINC00461-209ENST00000509265 CEP164Q9UPV0 1460 aa19.06■□□□□ 0.64
LINC00461-209ENST00000509265 MRC2Q9UBG0 1479 aa18.99■□□□□ 0.63
LINC00461-209ENST00000509265 THOC2Q8NI27 1593 aaKnown RBP18.96■□□□□ 0.63
LINC00461-209ENST00000509265 CUX2O14529 1486 aa18.91■□□□□ 0.62
LINC00461-209ENST00000509265 WDR62O43379 1518 aa18.91■□□□□ 0.62
LINC00461-209ENST00000509265 ABCC8Q09428 1581 aa18.91■□□□□ 0.62
LINC00461-209ENST00000509265 URB2Q14146 1524 aaKnown RBP18.89■□□□□ 0.61
LINC00461-209ENST00000509265 DNMBPQ6XZF7 1577 aa18.83■□□□□ 0.6
LINC00461-209ENST00000509265 TOPBP1Q92547 1522 aa18.83■□□□□ 0.6
LINC00461-209ENST00000509265 WRNQ14191 1432 aaPredicted RBP eCLIP18.76■□□□□ 0.59
LINC00461-209ENST00000509265 CUX1P39880 1505 aa18.75■□□□□ 0.59
LINC00461-209ENST00000509265 POLA1P09884 1462 aaPredicted RBP18.68■□□□□ 0.58
LINC00461-209ENST00000509265 IFT140Q96RY7 1462 aa18.68■□□□□ 0.58
LINC00461-209ENST00000509265 TOP2BQ02880 1626 aa18.67■□□□□ 0.58
LINC00461-209ENST00000509265 FGD5Q6ZNL6 1462 aa18.67■□□□□ 0.58
LINC00461-209ENST00000509265 BIVM-ERCC5R4GMW8 1640 aa18.66■□□□□ 0.58
LINC00461-209ENST00000509265 SYNJ1O43426 1573 aa18.65■□□□□ 0.58
LINC00461-209ENST00000509265 SOGA1O94964 1423 aa18.65■□□□□ 0.58
LINC00461-209ENST00000509265 TARBP1Q13395 1621 aaKnown RBP18.6■□□□□ 0.57
LINC00461-209ENST00000509265 RAD54L2Q9Y4B4 1467 aa18.59■□□□□ 0.57
LINC00461-209ENST00000509265 TRIM41Q8WV44 630 aa18.53■□□□□ 0.56
LINC00461-209ENST00000509265 ZNF608Q9ULD9 1512 aaPredicted RBP18.53■□□□□ 0.56
LINC00461-209ENST00000509265 ABCA10Q8WWZ4 1543 aa18.52■□□□□ 0.56
LINC00461-209ENST00000509265 WDR97A6NE52 1622 aa18.5■□□□□ 0.55
LINC00461-209ENST00000509265 TDRD9Q8NDG6 1382 aaKnown RBP18.5■□□□□ 0.55
LINC00461-209ENST00000509265 AQRO60306 1485 aaKnown RBP eCLIP18.48■□□□□ 0.55
LINC00461-209ENST00000509265 EIF4G3O43432 1585 aaKnown RBP18.44■□□□□ 0.54
LINC00461-209ENST00000509265 CHIC1Q5VXU3 224 aa18.44■□□□□ 0.54
LINC00461-209ENST00000509265 GAPVD1Q14C86 1478 aa18.42■□□□□ 0.54
LINC00461-209ENST00000509265 ABCA5Q8WWZ7 1642 aa18.39■□□□□ 0.53
LINC00461-209ENST00000509265 GRIN2BQ13224 1484 aa18.39■□□□□ 0.53
LINC00461-209ENST00000509265 KIF27Q86VH2 1401 aa18.38■□□□□ 0.53
LINC00461-209ENST00000509265 MAGI1Q96QZ7 1491 aaPredicted RBP18.32■□□□□ 0.52
LINC00461-209ENST00000509265 ERICH3Q5RHP9 1530 aa18.31■□□□□ 0.52
LINC00461-209ENST00000509265 PBRM1Q86U86 1689 aa18.31■□□□□ 0.52
LINC00461-209ENST00000509265 SNAPC4Q5SXM2 1469 aa18.28■□□□□ 0.52
LINC00461-209ENST00000509265 IGF1RP08069 1367 aa18.28■□□□□ 0.52
LINC00461-209ENST00000509265 CHMP7Q8WUX9 453 aaPredicted RBP18.25■□□□□ 0.51
LINC00461-209ENST00000509265 DNAJC5Q9H3Z4 198 aa18.25■□□□□ 0.51
LINC00461-209ENST00000509265 SYNJ2O15056 1496 aa18.24■□□□□ 0.51
LINC00461-209ENST00000509265 FBLN2P98095 1184 aa18.23■□□□□ 0.51
LINC00461-209ENST00000509265 OSCARQ8IYS5 282 aa18.23■□□□□ 0.51
LINC00461-209ENST00000509265 RUSC2Q8N2Y8 1516 aa18.23■□□□□ 0.51
LINC00461-209ENST00000509265 FHAD1B1AJZ9 1412 aa18.23■□□□□ 0.51
LINC00461-209ENST00000509265 EEA1Q15075 1411 aa18.2■□□□□ 0.5
LINC00461-209ENST00000509265 ADAMTS12P58397 1594 aa18.19■□□□□ 0.5
LINC00461-209ENST00000509265 CARMIL1Q5VZK9 1371 aa18.17■□□□□ 0.5
LINC00461-209ENST00000509265 CUL7Q14999 1698 aa18.17■□□□□ 0.5
LINC00461-209ENST00000509265 CHD1O14646 1710 aa18.17■□□□□ 0.5
LINC00461-209ENST00000509265 CSRNP3Q8WYN3 585 aa18.16■□□□□ 0.5
LINC00461-209ENST00000509265 GRIN2AQ12879 1464 aa18.14■□□□□ 0.49
LINC00461-209ENST00000509265 FAM9AQ8IZU1 332 aaPredicted RBP18.08■□□□□ 0.48
LINC00461-209ENST00000509265 RAPGEF2Q9Y4G8 1499 aa18.07■□□□□ 0.48
LINC00461-209ENST00000509265 PRXQ9BXM0 1461 aa18.07■□□□□ 0.48
LINC00461-209ENST00000509265 NUP160Q12769 1436 aa18.06■□□□□ 0.48
LINC00461-209ENST00000509265 CEP170Q5SW79 1584 aa18■□□□□ 0.47
LINC00461-209ENST00000509265 CLASP1Q7Z460 1538 aa17.99■□□□□ 0.47
LINC00461-209ENST00000509265 KIAA0586Q9BVV6 1533 aa17.97■□□□□ 0.47
LINC00461-209ENST00000509265 KIF21BO75037 1637 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms