RNA–Protein interactions for RNA: ENST00000508683.5

CCHCR1-226, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-226ENST00000508683 NISCHQ9Y2I1 1504 aa48.12■■■■■ 5.29
CCHCR1-226ENST00000508683 CCDC180Q9P1Z9 1646 aa42.74■■■■■ 4.43
CCHCR1-226ENST00000508683 ABCC9O60706 1549 aa41.39■■■■■ 4.22
CCHCR1-226ENST00000508683 ZCCHC6Q5VYS8 1495 aaKnown RBP40.15■■■■■ 4.02
CCHCR1-226ENST00000508683 NACADO15069 1562 aa40.09■■■■■ 4.01
CCHCR1-226ENST00000508683 RB1CC1Q8TDY2 1594 aa40.05■■■■■ 4
CCHCR1-226ENST00000508683 MYO15BQ96JP2 1530 aa39.98■■■■□ 3.99
CCHCR1-226ENST00000508683 DCAF8L2P0C7V8 631 aa39.96■■■■□ 3.99
CCHCR1-226ENST00000508683 DCAF1Q9Y4B6 1507 aa39.91■■■■□ 3.98
CCHCR1-226ENST00000508683 UNC13AQ9UPW8 1703 aa39.15■■■■□ 3.86
CCHCR1-226ENST00000508683 SCRIBQ14160 1630 aa38.9■■■■□ 3.82
CCHCR1-226ENST00000508683 BICRAQ9NZM4 1560 aa38.79■■■■□ 3.8
CCHCR1-226ENST00000508683 PABPN1Q86U42 306 aaKnown RBP eCLIP38.68■■■■□ 3.78
CCHCR1-226ENST00000508683 SHROOM4Q9ULL8 1493 aa38.51■■■■□ 3.76
CCHCR1-226ENST00000508683 EIF4G1Q04637 1599 aaKnown RBP37.76■■■■□ 3.63
CCHCR1-226ENST00000508683 DNAJC5BQ9UF47 199 aa37.68■■■■□ 3.62
CCHCR1-226ENST00000508683 CC2D2AQ9P2K1 1620 aa37.51■■■■□ 3.6
CCHCR1-226ENST00000508683 CECR2Q9BXF3 1484 aa37.39■■■■□ 3.58
CCHCR1-226ENST00000508683 BAZ1AQ9NRL2 1556 aaPredicted RBP37.31■■■■□ 3.56
CCHCR1-226ENST00000508683 SMARCA4P51532 1647 aa37.29■■■■□ 3.56
CCHCR1-226ENST00000508683 MROH2BQ7Z745 1585 aa37.05■■■■□ 3.52
CCHCR1-226ENST00000508683 SMARCA2P51531 1590 aa37.01■■■■□ 3.52
CCHCR1-226ENST00000508683 ATAD2BQ9ULI0 1458 aa36.99■■■■□ 3.51
CCHCR1-226ENST00000508683 PEG3Q9GZU2 1588 aa36.97■■■■□ 3.51
CCHCR1-226ENST00000508683 NCAPD3P42695 1498 aa36.96■■■■□ 3.51
CCHCR1-226ENST00000508683 HMGXB3Q12766 1538 aa36.83■■■■□ 3.49
CCHCR1-226ENST00000508683 RSF1Q96T23 1441 aaPredicted RBP36.75■■■■□ 3.47
CCHCR1-226ENST00000508683 BAZ1BQ9UIG0 1483 aaKnown RBP36.71■■■■□ 3.47
CCHCR1-226ENST00000508683 WIZO95785 1651 aa36.69■■■■□ 3.46
CCHCR1-226ENST00000508683 TOP2AP11388 1531 aaKnown RBP36.34■■■■□ 3.41
CCHCR1-226ENST00000508683 LAMC3Q9Y6N6 1575 aa35.97■■■■□ 3.35
CCHCR1-226ENST00000508683 SUPT5HO00267 1087 aaKnown RBP35.94■■■■□ 3.34
CCHCR1-226ENST00000508683 NESP48681 1621 aa35.9■■■■□ 3.34
CCHCR1-226ENST00000508683 CCDC88BA6NC98 1476 aa35.88■■■■□ 3.33
CCHCR1-226ENST00000508683 CADPSQ9ULU8 1353 aa35.87■■■■□ 3.33
CCHCR1-226ENST00000508683 CFTRP13569 1480 aa35.74■■■■□ 3.31
CCHCR1-226ENST00000508683 ERCC6Q03468 1493 aa35.68■■■■□ 3.3
CCHCR1-226ENST00000508683 PDS5BQ9NTI5 1447 aa35.68■■■■□ 3.3
CCHCR1-226ENST00000508683 PRDM2Q13029 1718 aa35.57■■■■□ 3.29
CCHCR1-226ENST00000508683 KIF21AQ7Z4S6 1674 aa35.56■■■■□ 3.28
CCHCR1-226ENST00000508683 FANCD2Q9BXW9 1451 aa35.45■■■■□ 3.27
CCHCR1-226ENST00000508683 CEP164Q9UPV0 1460 aa35.4■■■■□ 3.26
CCHCR1-226ENST00000508683 THOC2Q8NI27 1593 aaKnown RBP35.37■■■■□ 3.25
CCHCR1-226ENST00000508683 MRC2Q9UBG0 1479 aa35.29■■■■□ 3.24
CCHCR1-226ENST00000508683 CUX2O14529 1486 aa35.26■■■■□ 3.23
CCHCR1-226ENST00000508683 WDR62O43379 1518 aa35.17■■■■□ 3.22
CCHCR1-226ENST00000508683 URB2Q14146 1524 aaKnown RBP35.06■■■■□ 3.2
CCHCR1-226ENST00000508683 ABCC8Q09428 1581 aa35■■■■□ 3.19
CCHCR1-226ENST00000508683 DNMBPQ6XZF7 1577 aa34.94■■■■□ 3.18
CCHCR1-226ENST00000508683 TOPBP1Q92547 1522 aa34.92■■■■□ 3.18
CCHCR1-226ENST00000508683 CUX1P39880 1505 aa34.76■■■■□ 3.15
CCHCR1-226ENST00000508683 IFT140Q96RY7 1462 aa34.65■■■■□ 3.14
CCHCR1-226ENST00000508683 WRNQ14191 1432 aaPredicted RBP eCLIP34.65■■■■□ 3.14
CCHCR1-226ENST00000508683 POLA1P09884 1462 aaPredicted RBP34.64■■■■□ 3.14
CCHCR1-226ENST00000508683 BIVM-ERCC5R4GMW8 1640 aa34.59■■■■□ 3.13
CCHCR1-226ENST00000508683 FGD5Q6ZNL6 1462 aa34.59■■■■□ 3.13
CCHCR1-226ENST00000508683 TOP2BQ02880 1626 aa34.59■■■■□ 3.13
CCHCR1-226ENST00000508683 TARBP1Q13395 1621 aaKnown RBP34.55■■■■□ 3.12
CCHCR1-226ENST00000508683 SYNJ1O43426 1573 aa34.54■■■■□ 3.12
CCHCR1-226ENST00000508683 SOGA1O94964 1423 aa34.49■■■■□ 3.11
CCHCR1-226ENST00000508683 RAD54L2Q9Y4B4 1467 aa34.44■■■■□ 3.1
CCHCR1-226ENST00000508683 ZNF608Q9ULD9 1512 aaPredicted RBP34.4■■■■□ 3.1
CCHCR1-226ENST00000508683 WDR97A6NE52 1622 aa34.37■■■■□ 3.09
CCHCR1-226ENST00000508683 EIF4G3O43432 1585 aaKnown RBP34.34■■■■□ 3.09
CCHCR1-226ENST00000508683 ABCA10Q8WWZ4 1543 aa34.3■■■■□ 3.08
CCHCR1-226ENST00000508683 AQRO60306 1485 aaKnown RBP eCLIP34.25■■■■□ 3.072e-10■■■■■ 47.9
CCHCR1-226ENST00000508683 TDRD9Q8NDG6 1382 aaKnown RBP34.23■■■■□ 3.07
CCHCR1-226ENST00000508683 ABCA5Q8WWZ7 1642 aa34.15■■■■□ 3.06
CCHCR1-226ENST00000508683 GAPVD1Q14C86 1478 aa34.12■■■■□ 3.05
CCHCR1-226ENST00000508683 GRIN2BQ13224 1484 aa34.08■■■■□ 3.05
CCHCR1-226ENST00000508683 PBRM1Q86U86 1689 aa34.06■■■■□ 3.04
CCHCR1-226ENST00000508683 TRIM41Q8WV44 630 aa34■■■■□ 3.03
CCHCR1-226ENST00000508683 MAGI1Q96QZ7 1491 aaPredicted RBP33.98■■■■□ 3.03
CCHCR1-226ENST00000508683 SNAPC4Q5SXM2 1469 aa33.96■■■■□ 3.03
CCHCR1-226ENST00000508683 KIF27Q86VH2 1401 aa33.92■■■■□ 3.02
CCHCR1-226ENST00000508683 ERICH3Q5RHP9 1530 aa33.92■■■■□ 3.02
CCHCR1-226ENST00000508683 CHD1O14646 1710 aa33.87■■■■□ 3.01
CCHCR1-226ENST00000508683 SYNJ2O15056 1496 aa33.84■■■■□ 3.01
CCHCR1-226ENST00000508683 OSCARQ8IYS5 282 aa33.81■■■■□ 3
CCHCR1-226ENST00000508683 ADAMTS12P58397 1594 aa33.79■■■■□ 3
CCHCR1-226ENST00000508683 DNAJC5Q9H3Z4 198 aa33.78■■■■□ 3
CCHCR1-226ENST00000508683 CHIC1Q5VXU3 224 aa33.76■■■□□ 2.99
CCHCR1-226ENST00000508683 FBLN2P98095 1184 aa33.75■■■□□ 2.99
CCHCR1-226ENST00000508683 CHMP7Q8WUX9 453 aaPredicted RBP33.75■■■□□ 2.99
CCHCR1-226ENST00000508683 FHAD1B1AJZ9 1412 aa33.74■■■□□ 2.99
CCHCR1-226ENST00000508683 IGF1RP08069 1367 aa33.72■■■□□ 2.99
CCHCR1-226ENST00000508683 CUL7Q14999 1698 aa33.69■■■□□ 2.98
CCHCR1-226ENST00000508683 GRIN2AQ12879 1464 aa33.64■■■□□ 2.98
CCHCR1-226ENST00000508683 RUSC2Q8N2Y8 1516 aa33.63■■■□□ 2.97
CCHCR1-226ENST00000508683 CARMIL1Q5VZK9 1371 aa33.52■■■□□ 2.96
CCHCR1-226ENST00000508683 CLASP1Q7Z460 1538 aa33.5■■■□□ 2.95
CCHCR1-226ENST00000508683 EEA1Q15075 1411 aa33.5■■■□□ 2.95
CCHCR1-226ENST00000508683 NUP160Q12769 1436 aa33.49■■■□□ 2.95
CCHCR1-226ENST00000508683 CEP170Q5SW79 1584 aa33.45■■■□□ 2.95
CCHCR1-226ENST00000508683 RAPGEF2Q9Y4G8 1499 aa33.38■■■□□ 2.93
CCHCR1-226ENST00000508683 CSRNP3Q8WYN3 585 aa33.35■■■□□ 2.93
CCHCR1-226ENST00000508683 PRXQ9BXM0 1461 aa33.34■■■□□ 2.93
CCHCR1-226ENST00000508683 ARHGEF11O15085 1522 aa33.27■■■□□ 2.92
CCHCR1-226ENST00000508683 KIAA0586Q9BVV6 1533 aa33.25■■■□□ 2.91
CCHCR1-226ENST00000508683 RIMBP3CA6NJZ7 1639 aa33.24■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms