RNA–Protein interactions for RNA: ENST00000508339.1

LINC00491-202, long intergenic non-protein coding RNA 491, humanhuman

TSL 4

Gene LINC00491, Length 519 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00491-202ENST00000508339 NISCHQ9Y2I1 1504 aa24.15■■□□□ 1.46
LINC00491-202ENST00000508339 CCDC180Q9P1Z9 1646 aa21.29■■□□□ 1
LINC00491-202ENST00000508339 ABCC9O60706 1549 aa20.87■□□□□ 0.93
LINC00491-202ENST00000508339 DCAF8L2P0C7V8 631 aa20.27■□□□□ 0.84
LINC00491-202ENST00000508339 NACADO15069 1562 aa20.09■□□□□ 0.81
LINC00491-202ENST00000508339 ZCCHC6Q5VYS8 1495 aaKnown RBP20.09■□□□□ 0.81
LINC00491-202ENST00000508339 RB1CC1Q8TDY2 1594 aa20.06■□□□□ 0.8
LINC00491-202ENST00000508339 MYO15BQ96JP2 1530 aa20.02■□□□□ 0.79
LINC00491-202ENST00000508339 DCAF1Q9Y4B6 1507 aa19.97■□□□□ 0.79
LINC00491-202ENST00000508339 PABPN1Q86U42 306 aaKnown RBP eCLIP19.62■□□□□ 0.73
LINC00491-202ENST00000508339 UNC13AQ9UPW8 1703 aa19.53■□□□□ 0.72
LINC00491-202ENST00000508339 BICRAQ9NZM4 1560 aa19.48■□□□□ 0.71
LINC00491-202ENST00000508339 SCRIBQ14160 1630 aa19.47■□□□□ 0.71
LINC00491-202ENST00000508339 SHROOM4Q9ULL8 1493 aa19.23■□□□□ 0.67
LINC00491-202ENST00000508339 DNAJC5BQ9UF47 199 aa19.22■□□□□ 0.67
LINC00491-202ENST00000508339 EIF4G1Q04637 1599 aaKnown RBP18.94■□□□□ 0.62
LINC00491-202ENST00000508339 CC2D2AQ9P2K1 1620 aa18.84■□□□□ 0.61
LINC00491-202ENST00000508339 CECR2Q9BXF3 1484 aa18.84■□□□□ 0.61
LINC00491-202ENST00000508339 BAZ1AQ9NRL2 1556 aaPredicted RBP18.66■□□□□ 0.58
LINC00491-202ENST00000508339 SMARCA4P51532 1647 aa18.65■□□□□ 0.58
LINC00491-202ENST00000508339 MROH2BQ7Z745 1585 aa18.61■□□□□ 0.57
LINC00491-202ENST00000508339 NCAPD3P42695 1498 aa18.61■□□□□ 0.57
LINC00491-202ENST00000508339 ATAD2BQ9ULI0 1458 aa18.61■□□□□ 0.57
LINC00491-202ENST00000508339 SMARCA2P51531 1590 aa18.52■□□□□ 0.56
LINC00491-202ENST00000508339 PEG3Q9GZU2 1588 aa18.49■□□□□ 0.55
LINC00491-202ENST00000508339 RSF1Q96T23 1441 aaPredicted RBP18.48■□□□□ 0.55
LINC00491-202ENST00000508339 HMGXB3Q12766 1538 aa18.42■□□□□ 0.54
LINC00491-202ENST00000508339 BAZ1BQ9UIG0 1483 aaKnown RBP18.41■□□□□ 0.54
LINC00491-202ENST00000508339 WIZO95785 1651 aa18.37■□□□□ 0.53
LINC00491-202ENST00000508339 TOP2AP11388 1531 aaKnown RBP18.17■□□□□ 0.5
LINC00491-202ENST00000508339 SUPT5HO00267 1087 aaKnown RBP18.14■□□□□ 0.49
LINC00491-202ENST00000508339 NESP48681 1621 aa18.09■□□□□ 0.49
LINC00491-202ENST00000508339 CADPSQ9ULU8 1353 aa18.09■□□□□ 0.49
LINC00491-202ENST00000508339 CCDC88BA6NC98 1476 aa18.05■□□□□ 0.48
LINC00491-202ENST00000508339 LAMC3Q9Y6N6 1575 aa18.01■□□□□ 0.47
LINC00491-202ENST00000508339 CFTRP13569 1480 aa17.96■□□□□ 0.47
LINC00491-202ENST00000508339 PDS5BQ9NTI5 1447 aa17.96■□□□□ 0.47
LINC00491-202ENST00000508339 ERCC6Q03468 1493 aa17.95■□□□□ 0.46
LINC00491-202ENST00000508339 FANCD2Q9BXW9 1451 aa17.82■□□□□ 0.44
LINC00491-202ENST00000508339 KIF21AQ7Z4S6 1674 aa17.77■□□□□ 0.43
LINC00491-202ENST00000508339 CEP164Q9UPV0 1460 aa17.75■□□□□ 0.43
LINC00491-202ENST00000508339 CUX2O14529 1486 aa17.73■□□□□ 0.43
LINC00491-202ENST00000508339 MRC2Q9UBG0 1479 aa17.72■□□□□ 0.43
LINC00491-202ENST00000508339 THOC2Q8NI27 1593 aaKnown RBP17.7■□□□□ 0.42
LINC00491-202ENST00000508339 PRDM2Q13029 1718 aa17.64■□□□□ 0.41
LINC00491-202ENST00000508339 WDR62O43379 1518 aa17.62■□□□□ 0.41
LINC00491-202ENST00000508339 URB2Q14146 1524 aaKnown RBP17.62■□□□□ 0.41
LINC00491-202ENST00000508339 ABCC8Q09428 1581 aa17.56■□□□□ 0.4
LINC00491-202ENST00000508339 TOPBP1Q92547 1522 aa17.53■□□□□ 0.4
LINC00491-202ENST00000508339 DNMBPQ6XZF7 1577 aa17.48■□□□□ 0.39
LINC00491-202ENST00000508339 CUX1P39880 1505 aa17.43■□□□□ 0.38
LINC00491-202ENST00000508339 IFT140Q96RY7 1462 aa17.41■□□□□ 0.38
LINC00491-202ENST00000508339 SOGA1O94964 1423 aa17.39■□□□□ 0.38
LINC00491-202ENST00000508339 POLA1P09884 1462 aaPredicted RBP17.39■□□□□ 0.37
LINC00491-202ENST00000508339 WRNQ14191 1432 aaPredicted RBP eCLIP17.38■□□□□ 0.37
LINC00491-202ENST00000508339 FGD5Q6ZNL6 1462 aa17.36■□□□□ 0.37
LINC00491-202ENST00000508339 RAD54L2Q9Y4B4 1467 aa17.36■□□□□ 0.37
LINC00491-202ENST00000508339 ZNF608Q9ULD9 1512 aaPredicted RBP17.33■□□□□ 0.37
LINC00491-202ENST00000508339 TARBP1Q13395 1621 aaKnown RBP17.31■□□□□ 0.36
LINC00491-202ENST00000508339 TDRD9Q8NDG6 1382 aaKnown RBP17.29■□□□□ 0.36
LINC00491-202ENST00000508339 AQRO60306 1485 aaKnown RBP eCLIP17.29■□□□□ 0.36
LINC00491-202ENST00000508339 TOP2BQ02880 1626 aa17.28■□□□□ 0.36
LINC00491-202ENST00000508339 SYNJ1O43426 1573 aa17.28■□□□□ 0.36
LINC00491-202ENST00000508339 BIVM-ERCC5R4GMW8 1640 aa17.25■□□□□ 0.35
LINC00491-202ENST00000508339 DNAJC5Q9H3Z4 198 aa17.22■□□□□ 0.35
LINC00491-202ENST00000508339 ABCA10Q8WWZ4 1543 aa17.21■□□□□ 0.34
LINC00491-202ENST00000508339 EIF4G3O43432 1585 aaKnown RBP17.16■□□□□ 0.34
LINC00491-202ENST00000508339 OSCARQ8IYS5 282 aa17.16■□□□□ 0.34
LINC00491-202ENST00000508339 GAPVD1Q14C86 1478 aa17.15■□□□□ 0.34
LINC00491-202ENST00000508339 TRIM41Q8WV44 630 aa17.14■□□□□ 0.33
LINC00491-202ENST00000508339 WDR97A6NE52 1622 aa17.14■□□□□ 0.33
LINC00491-202ENST00000508339 GRIN2BQ13224 1484 aa17.12■□□□□ 0.33
LINC00491-202ENST00000508339 FBLN2P98095 1184 aa17.1■□□□□ 0.33
LINC00491-202ENST00000508339 CHMP7Q8WUX9 453 aaPredicted RBP17.07■□□□□ 0.32
LINC00491-202ENST00000508339 ABCA5Q8WWZ7 1642 aa17.06■□□□□ 0.32
LINC00491-202ENST00000508339 SNAPC4Q5SXM2 1469 aa17.05■□□□□ 0.32
LINC00491-202ENST00000508339 MAGI1Q96QZ7 1491 aaPredicted RBP17.04■□□□□ 0.32
LINC00491-202ENST00000508339 KIF27Q86VH2 1401 aa17.03■□□□□ 0.32
LINC00491-202ENST00000508339 IGF1RP08069 1367 aa17.02■□□□□ 0.32
LINC00491-202ENST00000508339 CHIC1Q5VXU3 224 aa17.02■□□□□ 0.32
LINC00491-202ENST00000508339 SYNJ2O15056 1496 aa16.99■□□□□ 0.31
LINC00491-202ENST00000508339 ERICH3Q5RHP9 1530 aa16.98■□□□□ 0.31
LINC00491-202ENST00000508339 FHAD1B1AJZ9 1412 aa16.96■□□□□ 0.31
LINC00491-202ENST00000508339 PBRM1Q86U86 1689 aa16.96■□□□□ 0.31
LINC00491-202ENST00000508339 RUSC2Q8N2Y8 1516 aa16.93■□□□□ 0.3
LINC00491-202ENST00000508339 CHD1O14646 1710 aa16.9■□□□□ 0.3
LINC00491-202ENST00000508339 CARMIL1Q5VZK9 1371 aa16.89■□□□□ 0.3
LINC00491-202ENST00000508339 GRIN2AQ12879 1464 aa16.88■□□□□ 0.29
LINC00491-202ENST00000508339 ADAMTS12P58397 1594 aa16.87■□□□□ 0.29
LINC00491-202ENST00000508339 NUP160Q12769 1436 aa16.83■□□□□ 0.28
LINC00491-202ENST00000508339 CSRNP3Q8WYN3 585 aa16.83■□□□□ 0.28
LINC00491-202ENST00000508339 CLASP1Q7Z460 1538 aa16.79■□□□□ 0.28
LINC00491-202ENST00000508339 JPH4Q96JJ6 628 aa16.78■□□□□ 0.28
LINC00491-202ENST00000508339 CUL7Q14999 1698 aa16.78■□□□□ 0.28
LINC00491-202ENST00000508339 FAM9AQ8IZU1 332 aaPredicted RBP16.77■□□□□ 0.28
LINC00491-202ENST00000508339 CEP170Q5SW79 1584 aa16.77■□□□□ 0.27
LINC00491-202ENST00000508339 RAPGEF2Q9Y4G8 1499 aa16.75■□□□□ 0.27
LINC00491-202ENST00000508339 EEA1Q15075 1411 aa16.75■□□□□ 0.27
LINC00491-202ENST00000508339 ARHGEF11O15085 1522 aa16.73■□□□□ 0.27
LINC00491-202ENST00000508339 PRXQ9BXM0 1461 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms