RNA–Protein interactions for RNA: ENST00000508167.5

PROM1-207, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-207ENST00000508167 NISCHQ9Y2I1 1504 aa24.92■■□□□ 1.58
PROM1-207ENST00000508167 CCDC180Q9P1Z9 1646 aa21.76■■□□□ 1.07
PROM1-207ENST00000508167 DCAF8L2P0C7V8 631 aa21.39■■□□□ 1.01
PROM1-207ENST00000508167 ABCC9O60706 1549 aa21.34■■□□□ 1.01
PROM1-207ENST00000508167 ZCCHC6Q5VYS8 1495 aaKnown RBP20.79■□□□□ 0.92
PROM1-207ENST00000508167 NACADO15069 1562 aa20.5■□□□□ 0.87
PROM1-207ENST00000508167 RB1CC1Q8TDY2 1594 aa20.49■□□□□ 0.87
PROM1-207ENST00000508167 SHROOM4Q9ULL8 1493 aa20.47■□□□□ 0.87
PROM1-207ENST00000508167 DCAF1Q9Y4B6 1507 aa20.45■□□□□ 0.86
PROM1-207ENST00000508167 MYO15BQ96JP2 1530 aa20.35■□□□□ 0.85
PROM1-207ENST00000508167 SCRIBQ14160 1630 aa20.2■□□□□ 0.82
PROM1-207ENST00000508167 PABPN1Q86U42 306 aaKnown RBP eCLIP20.18■□□□□ 0.82
PROM1-207ENST00000508167 UNC13AQ9UPW8 1703 aa19.78■□□□□ 0.76
PROM1-207ENST00000508167 BICRAQ9NZM4 1560 aa19.69■□□□□ 0.74
PROM1-207ENST00000508167 SUPT5HO00267 1087 aaKnown RBP19.6■□□□□ 0.73
PROM1-207ENST00000508167 CECR2Q9BXF3 1484 aa19.47■□□□□ 0.71
PROM1-207ENST00000508167 BAZ1AQ9NRL2 1556 aaPredicted RBP19.31■□□□□ 0.68
PROM1-207ENST00000508167 EIF4G1Q04637 1599 aaKnown RBP19.27■□□□□ 0.68
PROM1-207ENST00000508167 MROH2BQ7Z745 1585 aa19.26■□□□□ 0.67
PROM1-207ENST00000508167 RSF1Q96T23 1441 aaPredicted RBP19.24■□□□□ 0.67
PROM1-207ENST00000508167 SMARCA4P51532 1647 aa19.21■□□□□ 0.67
PROM1-207ENST00000508167 DNAJC5BQ9UF47 199 aa19.14■□□□□ 0.65
PROM1-207ENST00000508167 CC2D2AQ9P2K1 1620 aa19.1■□□□□ 0.65
PROM1-207ENST00000508167 ATAD2BQ9ULI0 1458 aa19.08■□□□□ 0.64
PROM1-207ENST00000508167 SMARCA2P51531 1590 aa19.06■□□□□ 0.64
PROM1-207ENST00000508167 WIZO95785 1651 aa19.06■□□□□ 0.64
PROM1-207ENST00000508167 BAZ1BQ9UIG0 1483 aaKnown RBP19.05■□□□□ 0.64
PROM1-207ENST00000508167 NCAPD3P42695 1498 aa18.95■□□□□ 0.62
PROM1-207ENST00000508167 PEG3Q9GZU2 1588 aa18.85■□□□□ 0.61
PROM1-207ENST00000508167 TOP2AP11388 1531 aaKnown RBP18.84■□□□□ 0.61
PROM1-207ENST00000508167 HMGXB3Q12766 1538 aa18.81■□□□□ 0.6
PROM1-207ENST00000508167 CCDC88BA6NC98 1476 aa18.72■□□□□ 0.59
PROM1-207ENST00000508167 CHIC1Q5VXU3 224 aa18.62■□□□□ 0.57
PROM1-207ENST00000508167 CADPSQ9ULU8 1353 aa18.56■□□□□ 0.56
PROM1-207ENST00000508167 NESP48681 1621 aa18.5■□□□□ 0.55
PROM1-207ENST00000508167 ERCC6Q03468 1493 aa18.44■□□□□ 0.54
PROM1-207ENST00000508167 PDS5BQ9NTI5 1447 aa18.42■□□□□ 0.54
PROM1-207ENST00000508167 CFTRP13569 1480 aa18.42■□□□□ 0.54
PROM1-207ENST00000508167 TRIM41Q8WV44 630 aa18.39■□□□□ 0.54
PROM1-207ENST00000508167 LAMC3Q9Y6N6 1575 aa18.36■□□□□ 0.53
PROM1-207ENST00000508167 FANCD2Q9BXW9 1451 aa18.34■□□□□ 0.53
PROM1-207ENST00000508167 CEP164Q9UPV0 1460 aa18.29■□□□□ 0.52
PROM1-207ENST00000508167 WRNQ14191 1432 aaPredicted RBP eCLIP18.23■□□□□ 0.51
PROM1-207ENST00000508167 ABCC8Q09428 1581 aa18.22■□□□□ 0.51
PROM1-207ENST00000508167 FAM9AQ8IZU1 332 aaPredicted RBP18.17■□□□□ 0.5
PROM1-207ENST00000508167 MRC2Q9UBG0 1479 aa18.11■□□□□ 0.49
PROM1-207ENST00000508167 KIF21AQ7Z4S6 1674 aa18.11■□□□□ 0.49
PROM1-207ENST00000508167 PRDM2Q13029 1718 aa18.06■□□□□ 0.48
PROM1-207ENST00000508167 EHMT2Q96KQ7 1210 aa18.05■□□□□ 0.48
PROM1-207ENST00000508167 URB2Q14146 1524 aaKnown RBP18.04■□□□□ 0.48
PROM1-207ENST00000508167 TOPBP1Q92547 1522 aa18.04■□□□□ 0.48
PROM1-207ENST00000508167 CUX1P39880 1505 aa18.02■□□□□ 0.48
PROM1-207ENST00000508167 SOGA1O94964 1423 aa18■□□□□ 0.47
PROM1-207ENST00000508167 SYNJ1O43426 1573 aa17.99■□□□□ 0.47
PROM1-207ENST00000508167 DNMBPQ6XZF7 1577 aa17.99■□□□□ 0.47
PROM1-207ENST00000508167 FGD5Q6ZNL6 1462 aa17.99■□□□□ 0.47
PROM1-207ENST00000508167 RAD54L2Q9Y4B4 1467 aa17.94■□□□□ 0.46
PROM1-207ENST00000508167 TOP2BQ02880 1626 aa17.92■□□□□ 0.46
PROM1-207ENST00000508167 POLA1P09884 1462 aaPredicted RBP17.92■□□□□ 0.46
PROM1-207ENST00000508167 TDRD9Q8NDG6 1382 aaKnown RBP17.91■□□□□ 0.46
PROM1-207ENST00000508167 LOC105371045A0A1W2PR82 267 aa17.9■□□□□ 0.46
PROM1-207ENST00000508167 CUX2O14529 1486 aa17.89■□□□□ 0.46
PROM1-207ENST00000508167 WDR62O43379 1518 aa17.89■□□□□ 0.45
PROM1-207ENST00000508167 THOC2Q8NI27 1593 aaKnown RBP17.87■□□□□ 0.45
PROM1-207ENST00000508167 FBLN2P98095 1184 aa17.87■□□□□ 0.45
PROM1-207ENST00000508167 KIF27Q86VH2 1401 aa17.85■□□□□ 0.45
PROM1-207ENST00000508167 IFT140Q96RY7 1462 aa17.83■□□□□ 0.45
PROM1-207ENST00000508167 BIVM-ERCC5R4GMW8 1640 aa17.83■□□□□ 0.45
PROM1-207ENST00000508167 CSRNP3Q8WYN3 585 aa17.82■□□□□ 0.44
PROM1-207ENST00000508167 AQRO60306 1485 aaKnown RBP eCLIP17.8■□□□□ 0.44
PROM1-207ENST00000508167 UBTFP17480 764 aaKnown RBP17.77■□□□□ 0.44
PROM1-207ENST00000508167 RUSC2Q8N2Y8 1516 aa17.75■□□□□ 0.43
PROM1-207ENST00000508167 ZNF608Q9ULD9 1512 aaPredicted RBP17.75■□□□□ 0.43
PROM1-207ENST00000508167 GAPVD1Q14C86 1478 aa17.74■□□□□ 0.43
PROM1-207ENST00000508167 RANGAP1P46060 587 aaPredicted RBP17.74■□□□□ 0.43
PROM1-207ENST00000508167 CHMP7Q8WUX9 453 aaPredicted RBP17.73■□□□□ 0.43
PROM1-207ENST00000508167 ABCA10Q8WWZ4 1543 aa17.73■□□□□ 0.43
PROM1-207ENST00000508167 EEA1Q15075 1411 aa17.71■□□□□ 0.42
PROM1-207ENST00000508167 CARMIL1Q5VZK9 1371 aa17.65■□□□□ 0.42
PROM1-207ENST00000508167 TARBP1Q13395 1621 aaKnown RBP17.65■□□□□ 0.42
PROM1-207ENST00000508167 GRIN2BQ13224 1484 aa17.64■□□□□ 0.42
PROM1-207ENST00000508167 IGF1RP08069 1367 aa17.64■□□□□ 0.42
PROM1-207ENST00000508167 EIF4G3O43432 1585 aaKnown RBP17.58■□□□□ 0.4
PROM1-207ENST00000508167 SNAPC4Q5SXM2 1469 aa17.58■□□□□ 0.4
PROM1-207ENST00000508167 FHAD1B1AJZ9 1412 aa17.52■□□□□ 0.4
PROM1-207ENST00000508167 ERICH3Q5RHP9 1530 aa17.51■□□□□ 0.39
PROM1-207ENST00000508167 ABCA5Q8WWZ7 1642 aa17.51■□□□□ 0.39
PROM1-207ENST00000508167 TTBK1Q5TCY1 1321 aaPredicted RBP17.51■□□□□ 0.39
PROM1-207ENST00000508167 RAPGEF2Q9Y4G8 1499 aa17.51■□□□□ 0.39
PROM1-207ENST00000508167 KIF21BO75037 1637 aa17.5■□□□□ 0.39
PROM1-207ENST00000508167 WDR97A6NE52 1622 aa17.49■□□□□ 0.39
PROM1-207ENST00000508167 GOLGA3Q08378 1498 aa17.49■□□□□ 0.39
PROM1-207ENST00000508167 MAGI1Q96QZ7 1491 aaPredicted RBP17.49■□□□□ 0.39
PROM1-207ENST00000508167 OSCARQ8IYS5 282 aa17.46■□□□□ 0.39
PROM1-207ENST00000508167 PBRM1Q86U86 1689 aa17.45■□□□□ 0.38
PROM1-207ENST00000508167 SYNJ2O15056 1496 aa17.45■□□□□ 0.38
PROM1-207ENST00000508167 PRXQ9BXM0 1461 aa17.43■□□□□ 0.38
PROM1-207ENST00000508167 P3H3Q8IVL6 736 aa17.42■□□□□ 0.38
PROM1-207ENST00000508167 CUL7Q14999 1698 aa17.41■□□□□ 0.38
PROM1-207ENST00000508167 GRIN2AQ12879 1464 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms