RNA–Protein interactions for RNA: ENST00000507594.1

SMAD1-207, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 558 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-207ENST00000507594 NISCHQ9Y2I1 1504 aa21.16■□□□□ 0.98
SMAD1-207ENST00000507594 CHIC1Q5VXU3 224 aa20.36■□□□□ 0.85
SMAD1-207ENST00000507594 AEBP2Q6ZN18 517 aaPredicted RBP20.02■□□□□ 0.8
SMAD1-207ENST00000507594 CCDC180Q9P1Z9 1646 aa18.72■□□□□ 0.59
SMAD1-207ENST00000507594 ABCC9O60706 1549 aa18.09■□□□□ 0.49
SMAD1-207ENST00000507594 PHF23Q9BUL5 403 aaPredicted RBP17.87■□□□□ 0.45
SMAD1-207ENST00000507594 DCAF8L2P0C7V8 631 aa17.75■□□□□ 0.43
SMAD1-207ENST00000507594 ZCCHC6Q5VYS8 1495 aaKnown RBP17.69■□□□□ 0.42
SMAD1-207ENST00000507594 NACADO15069 1562 aa17.51■□□□□ 0.39
SMAD1-207ENST00000507594 RB1CC1Q8TDY2 1594 aa17.51■□□□□ 0.39
SMAD1-207ENST00000507594 DCAF1Q9Y4B6 1507 aa17.47■□□□□ 0.39
SMAD1-207ENST00000507594 MYO15BQ96JP2 1530 aa17.4■□□□□ 0.38
SMAD1-207ENST00000507594 SCRIBQ14160 1630 aa17.19■□□□□ 0.34
SMAD1-207ENST00000507594 UNC13AQ9UPW8 1703 aa17.1■□□□□ 0.33
SMAD1-207ENST00000507594 SHROOM4Q9ULL8 1493 aa17.06■□□□□ 0.32
SMAD1-207ENST00000507594 SENP3Q9H4L4 574 aaPredicted RBP17.05■□□□□ 0.32
SMAD1-207ENST00000507594 PABPN1Q86U42 306 aaKnown RBP eCLIP16.95■□□□□ 0.3
SMAD1-207ENST00000507594 PLPPR3Q6T4P5 718 aa16.89■□□□□ 0.29
SMAD1-207ENST00000507594 BICRAQ9NZM4 1560 aa16.87■□□□□ 0.29
SMAD1-207ENST00000507594 EIF4G1Q04637 1599 aaKnown RBP16.47■□□□□ 0.23
SMAD1-207ENST00000507594 CECR2Q9BXF3 1484 aa16.45■□□□□ 0.22
SMAD1-207ENST00000507594 BAZ1AQ9NRL2 1556 aaPredicted RBP16.43■□□□□ 0.22
SMAD1-207ENST00000507594 SMARCA4P51532 1647 aa16.4■□□□□ 0.22
SMAD1-207ENST00000507594 CC2D2AQ9P2K1 1620 aa16.34■□□□□ 0.21
SMAD1-207ENST00000507594 MROH2BQ7Z745 1585 aa16.33■□□□□ 0.2
SMAD1-207ENST00000507594 SMARCA2P51531 1590 aa16.23■□□□□ 0.19
SMAD1-207ENST00000507594 RSF1Q96T23 1441 aaPredicted RBP16.22■□□□□ 0.19
SMAD1-207ENST00000507594 WIZO95785 1651 aa16.21■□□□□ 0.19
SMAD1-207ENST00000507594 SUPT5HO00267 1087 aaKnown RBP16.2■□□□□ 0.18
SMAD1-207ENST00000507594 ATAD2BQ9ULI0 1458 aa16.19■□□□□ 0.18
SMAD1-207ENST00000507594 DNAJC5BQ9UF47 199 aa16.19■□□□□ 0.18
SMAD1-207ENST00000507594 BAZ1BQ9UIG0 1483 aaKnown RBP16.16■□□□□ 0.18
SMAD1-207ENST00000507594 PEG3Q9GZU2 1588 aa16.14■□□□□ 0.17
SMAD1-207ENST00000507594 HMGXB3Q12766 1538 aa16.1■□□□□ 0.17
SMAD1-207ENST00000507594 NCAPD3P42695 1498 aa16.1■□□□□ 0.17
SMAD1-207ENST00000507594 TOP2AP11388 1531 aaKnown RBP16.04■□□□□ 0.16
SMAD1-207ENST00000507594 CCDC88BA6NC98 1476 aa15.83■□□□□ 0.12
SMAD1-207ENST00000507594 NESP48681 1621 aa15.71■□□□□ 0.11
SMAD1-207ENST00000507594 LAMC3Q9Y6N6 1575 aa15.7■□□□□ 0.1
SMAD1-207ENST00000507594 CADPSQ9ULU8 1353 aa15.69■□□□□ 0.1
SMAD1-207ENST00000507594 PRDM2Q13029 1718 aa15.65■□□□□ 0.1
SMAD1-207ENST00000507594 CFTRP13569 1480 aa15.64■□□□□ 0.09
SMAD1-207ENST00000507594 ERCC6Q03468 1493 aa15.64■□□□□ 0.09
SMAD1-207ENST00000507594 FOXD1Q16676 465 aa15.62■□□□□ 0.09
SMAD1-207ENST00000507594 PDS5BQ9NTI5 1447 aa15.6■□□□□ 0.09
SMAD1-207ENST00000507594 ADRA2BP18089 450 aa15.58■□□□□ 0.08
SMAD1-207ENST00000507594 KIF21AQ7Z4S6 1674 aa15.57■□□□□ 0.08
SMAD1-207ENST00000507594 FANCD2Q9BXW9 1451 aa15.55■□□□□ 0.08
SMAD1-207ENST00000507594 CEP164Q9UPV0 1460 aa15.54■□□□□ 0.08
SMAD1-207ENST00000507594 PPP6R1Q9UPN7 881 aa15.51■□□□□ 0.07
SMAD1-207ENST00000507594 MRC2Q9UBG0 1479 aa15.43■□□□□ 0.06
SMAD1-207ENST00000507594 ABCC8Q09428 1581 aa15.41■□□□□ 0.06
SMAD1-207ENST00000507594 THOC2Q8NI27 1593 aaKnown RBP15.4■□□□□ 0.06
SMAD1-207ENST00000507594 DNMBPQ6XZF7 1577 aa15.36■□□□□ 0.05
SMAD1-207ENST00000507594 WRNQ14191 1432 aaPredicted RBP eCLIP15.35■□□□□ 0.05
SMAD1-207ENST00000507594 URB2Q14146 1524 aaKnown RBP15.35■□□□□ 0.05
SMAD1-207ENST00000507594 WDR62O43379 1518 aa15.33■□□□□ 0.05
SMAD1-207ENST00000507594 TOPBP1Q92547 1522 aa15.33■□□□□ 0.04
SMAD1-207ENST00000507594 CUX1P39880 1505 aa15.31■□□□□ 0.04
SMAD1-207ENST00000507594 SYNJ1O43426 1573 aa15.29■□□□□ 0.04
SMAD1-207ENST00000507594 TOP2BQ02880 1626 aa15.27■□□□□ 0.03
SMAD1-207ENST00000507594 BIVM-ERCC5R4GMW8 1640 aa15.27■□□□□ 0.03
SMAD1-207ENST00000507594 KCNA4P22459 653 aa15.26■□□□□ 0.03
SMAD1-207ENST00000507594 TRIM41Q8WV44 630 aa15.26■□□□□ 0.03
SMAD1-207ENST00000507594 CUX2O14529 1486 aa15.25■□□□□ 0.03
SMAD1-207ENST00000507594 FGD5Q6ZNL6 1462 aa15.25■□□□□ 0.03
SMAD1-207ENST00000507594 POLA1P09884 1462 aaPredicted RBP15.2■□□□□ 0.02
SMAD1-207ENST00000507594 SOGA1O94964 1423 aa15.17■□□□□ 0.02
SMAD1-207ENST00000507594 IFT140Q96RY7 1462 aa15.16■□□□□ 0.02
SMAD1-207ENST00000507594 RAD54L2Q9Y4B4 1467 aa15.16■□□□□ 0.02
SMAD1-207ENST00000507594 TARBP1Q13395 1621 aaKnown RBP15.1■□□□□ 0.01
SMAD1-207ENST00000507594 WDR97A6NE52 1622 aa15.08■□□□□ 0
SMAD1-207ENST00000507594 ABCA10Q8WWZ4 1543 aa15.07■□□□□ 0
SMAD1-207ENST00000507594 EIF4G3O43432 1585 aaKnown RBP15.07■□□□□ 0
SMAD1-207ENST00000507594 TDRD9Q8NDG6 1382 aaKnown RBP15.06■□□□□ 0
SMAD1-207ENST00000507594 ZNF608Q9ULD9 1512 aaPredicted RBP15.06■□□□□ 0
SMAD1-207ENST00000507594 AQRO60306 1485 aaKnown RBP eCLIP15.02■□□□□ -0
SMAD1-207ENST00000507594 KIF27Q86VH2 1401 aa15.02■□□□□ -0
SMAD1-207ENST00000507594 PBRM1Q86U86 1689 aa15.01□□□□□ -0.01
SMAD1-207ENST00000507594 GAPVD1Q14C86 1478 aa15.01□□□□□ -0.01
SMAD1-207ENST00000507594 ABCA5Q8WWZ7 1642 aa15□□□□□ -0.01
SMAD1-207ENST00000507594 FAM9AQ8IZU1 332 aaPredicted RBP14.99□□□□□ -0.01
SMAD1-207ENST00000507594 GRIN2BQ13224 1484 aa14.96□□□□□ -0.01
SMAD1-207ENST00000507594 EHMT2Q96KQ7 1210 aa14.96□□□□□ -0.01
SMAD1-207ENST00000507594 RUSC2Q8N2Y8 1516 aa14.93□□□□□ -0.02
SMAD1-207ENST00000507594 SNAPC4Q5SXM2 1469 aa14.93□□□□□ -0.02
SMAD1-207ENST00000507594 EEA1Q15075 1411 aa14.92□□□□□ -0.02
SMAD1-207ENST00000507594 FBLN2P98095 1184 aa14.91□□□□□ -0.02
SMAD1-207ENST00000507594 PIAS4Q8N2W9 510 aaPredicted RBP14.91□□□□□ -0.02
SMAD1-207ENST00000507594 ERICH3Q5RHP9 1530 aa14.91□□□□□ -0.02
SMAD1-207ENST00000507594 PPP4R3CPQ6ZMV5 832 aa14.89□□□□□ -0.03
SMAD1-207ENST00000507594 CUL7Q14999 1698 aa14.88□□□□□ -0.03
SMAD1-207ENST00000507594 MAGI1Q96QZ7 1491 aaPredicted RBP14.88□□□□□ -0.03
SMAD1-207ENST00000507594 ADAMTS12P58397 1594 aa14.87□□□□□ -0.03
SMAD1-207ENST00000507594 CHMP7Q8WUX9 453 aaPredicted RBP14.85□□□□□ -0.03
SMAD1-207ENST00000507594 CHD1O14646 1710 aa14.84□□□□□ -0.03
SMAD1-207ENST00000507594 CSRNP3Q8WYN3 585 aa14.84□□□□□ -0.03
SMAD1-207ENST00000507594 IGF1RP08069 1367 aa14.83□□□□□ -0.04
SMAD1-207ENST00000507594 FHAD1B1AJZ9 1412 aa14.83□□□□□ -0.04
SMAD1-207ENST00000507594 NCBP3Q53F19 620 aaKnown RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms