RNA–Protein interactions for RNA: ENST00000507559.1

GNPDA1-209, Transcript of glucosamine-6-phosphate deaminase 1, humanhuman

TSL 3

Gene GNPDA1, Length 413 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPDA1-209ENST00000507559 NISCHQ9Y2I1 1504 aa20.82■□□□□ 0.92
GNPDA1-209ENST00000507559 CCDC180Q9P1Z9 1646 aa18.7■□□□□ 0.58
GNPDA1-209ENST00000507559 ABCC9O60706 1549 aa18.59■□□□□ 0.57
GNPDA1-209ENST00000507559 RB1CC1Q8TDY2 1594 aa17.71■□□□□ 0.43
GNPDA1-209ENST00000507559 ZCCHC6Q5VYS8 1495 aaKnown RBP17.6■□□□□ 0.41
GNPDA1-209ENST00000507559 NACADO15069 1562 aa17.58■□□□□ 0.41
GNPDA1-209ENST00000507559 UNC13AQ9UPW8 1703 aa17.52■□□□□ 0.4
GNPDA1-209ENST00000507559 DNAJC5BQ9UF47 199 aa17.42■□□□□ 0.38
GNPDA1-209ENST00000507559 MYO15BQ96JP2 1530 aa17.34■□□□□ 0.37
GNPDA1-209ENST00000507559 DCAF1Q9Y4B6 1507 aa17.32■□□□□ 0.36
GNPDA1-209ENST00000507559 BICRAQ9NZM4 1560 aa17.29■□□□□ 0.36
GNPDA1-209ENST00000507559 DCAF8L2P0C7V8 631 aa17.25■□□□□ 0.35
GNPDA1-209ENST00000507559 PABPN1Q86U42 306 aaKnown RBP eCLIP17.21■□□□□ 0.35
GNPDA1-209ENST00000507559 SHROOM4Q9ULL8 1493 aa17.16■□□□□ 0.34
GNPDA1-209ENST00000507559 SCRIBQ14160 1630 aa17■□□□□ 0.31
GNPDA1-209ENST00000507559 CC2D2AQ9P2K1 1620 aa16.86■□□□□ 0.29
GNPDA1-209ENST00000507559 EIF4G1Q04637 1599 aaKnown RBP16.82■□□□□ 0.28
GNPDA1-209ENST00000507559 SUPT5HO00267 1087 aaKnown RBP16.8■□□□□ 0.28
GNPDA1-209ENST00000507559 CECR2Q9BXF3 1484 aa16.73■□□□□ 0.27
GNPDA1-209ENST00000507559 CHIC1Q5VXU3 224 aa16.41■□□□□ 0.22
GNPDA1-209ENST00000507559 RSF1Q96T23 1441 aaPredicted RBP16.31■□□□□ 0.2
GNPDA1-209ENST00000507559 SMARCA4P51532 1647 aa16.23■□□□□ 0.19
GNPDA1-209ENST00000507559 NCAPD3P42695 1498 aa16.19■□□□□ 0.18
GNPDA1-209ENST00000507559 ATAD2BQ9ULI0 1458 aa16.16■□□□□ 0.18
GNPDA1-209ENST00000507559 HMGXB3Q12766 1538 aa16.15■□□□□ 0.18
GNPDA1-209ENST00000507559 SMARCA2P51531 1590 aa16.13■□□□□ 0.17
GNPDA1-209ENST00000507559 BAZ1AQ9NRL2 1556 aaPredicted RBP16.08■□□□□ 0.16
GNPDA1-209ENST00000507559 PEG3Q9GZU2 1588 aa16.06■□□□□ 0.16
GNPDA1-209ENST00000507559 MROH2BQ7Z745 1585 aa16.04■□□□□ 0.16
GNPDA1-209ENST00000507559 CUX2O14529 1486 aa16.04■□□□□ 0.16
GNPDA1-209ENST00000507559 ERCC6Q03468 1493 aa16.01■□□□□ 0.15
GNPDA1-209ENST00000507559 NESP48681 1621 aa16.01■□□□□ 0.15
GNPDA1-209ENST00000507559 BAZ1BQ9UIG0 1483 aaKnown RBP16■□□□□ 0.15
GNPDA1-209ENST00000507559 THOC2Q8NI27 1593 aaKnown RBP15.95■□□□□ 0.14
GNPDA1-209ENST00000507559 DNAJC5Q9H3Z4 198 aa15.94■□□□□ 0.14
GNPDA1-209ENST00000507559 WIZO95785 1651 aa15.92■□□□□ 0.14
GNPDA1-209ENST00000507559 KIF21AQ7Z4S6 1674 aa15.91■□□□□ 0.14
GNPDA1-209ENST00000507559 LAMC3Q9Y6N6 1575 aa15.89■□□□□ 0.13
GNPDA1-209ENST00000507559 TOP2AP11388 1531 aaKnown RBP15.88■□□□□ 0.13
GNPDA1-209ENST00000507559 TRIM41Q8WV44 630 aa15.85■□□□□ 0.13
GNPDA1-209ENST00000507559 LOC105371045A0A1W2PR82 267 aa15.7■□□□□ 0.1
GNPDA1-209ENST00000507559 PDS5BQ9NTI5 1447 aa15.68■□□□□ 0.1
GNPDA1-209ENST00000507559 CADPSQ9ULU8 1353 aa15.66■□□□□ 0.1
GNPDA1-209ENST00000507559 WDR62O43379 1518 aa15.66■□□□□ 0.1
GNPDA1-209ENST00000507559 CCDC88BA6NC98 1476 aa15.65■□□□□ 0.1
GNPDA1-209ENST00000507559 MRC2Q9UBG0 1479 aa15.64■□□□□ 0.09
GNPDA1-209ENST00000507559 HRCP23327 699 aa15.63■□□□□ 0.09
GNPDA1-209ENST00000507559 PRDM2Q13029 1718 aa15.58■□□□□ 0.08
GNPDA1-209ENST00000507559 TRIM26Q12899 539 aaPredicted RBP15.57■□□□□ 0.08
GNPDA1-209ENST00000507559 PCGF6Q9BYE7 350 aa15.57■□□□□ 0.08
GNPDA1-209ENST00000507559 CEP164Q9UPV0 1460 aa15.57■□□□□ 0.08
GNPDA1-209ENST00000507559 EEA1Q15075 1411 aa15.54■□□□□ 0.08
GNPDA1-209ENST00000507559 CFTRP13569 1480 aa15.53■□□□□ 0.08
GNPDA1-209ENST00000507559 FANCD2Q9BXW9 1451 aa15.53■□□□□ 0.08
GNPDA1-209ENST00000507559 URB2Q14146 1524 aaKnown RBP15.46■□□□□ 0.07
GNPDA1-209ENST00000507559 FAM9AQ8IZU1 332 aaPredicted RBP15.45■□□□□ 0.06
GNPDA1-209ENST00000507559 ABCC8Q09428 1581 aa15.43■□□□□ 0.06
GNPDA1-209ENST00000507559 WRNQ14191 1432 aaPredicted RBP eCLIP15.37■□□□□ 0.05
GNPDA1-209ENST00000507559 ZEB1P37275 1124 aaPredicted RBP15.33■□□□□ 0.04
GNPDA1-209ENST00000507559 TNIKQ9UKE5 1360 aa15.31■□□□□ 0.04
GNPDA1-209ENST00000507559 TOPBP1Q92547 1522 aa15.27■□□□□ 0.04
GNPDA1-209ENST00000507559 CSRNP3Q8WYN3 585 aa15.27■□□□□ 0.04
GNPDA1-209ENST00000507559 GOLGA3Q08378 1498 aa15.27■□□□□ 0.03
GNPDA1-209ENST00000507559 ZNF608Q9ULD9 1512 aaPredicted RBP15.26■□□□□ 0.03
GNPDA1-209ENST00000507559 SOGA1O94964 1423 aa15.26■□□□□ 0.03
GNPDA1-209ENST00000507559 EIF4G3O43432 1585 aaKnown RBP15.25■□□□□ 0.03
GNPDA1-209ENST00000507559 DNMBPQ6XZF7 1577 aa15.24■□□□□ 0.03
GNPDA1-209ENST00000507559 KIF21BO75037 1637 aa15.24■□□□□ 0.03
GNPDA1-209ENST00000507559 IFT140Q96RY7 1462 aa15.23■□□□□ 0.03
GNPDA1-209ENST00000507559 SYNJ1O43426 1573 aa15.23■□□□□ 0.03
GNPDA1-209ENST00000507559 CEP162Q5TB80 1403 aa15.21■□□□□ 0.03
GNPDA1-209ENST00000507559 TOP2BQ02880 1626 aa15.21■□□□□ 0.02
GNPDA1-209ENST00000507559 TARBP1Q13395 1621 aaKnown RBP15.2■□□□□ 0.02
GNPDA1-209ENST00000507559 RIMBP3CA6NJZ7 1639 aa15.19■□□□□ 0.02
GNPDA1-209ENST00000507559 RIMBP3BA6NNM3 1639 aa15.19■□□□□ 0.02
GNPDA1-209ENST00000507559 RIMBP3Q9UFD9 1639 aa15.19■□□□□ 0.02
GNPDA1-209ENST00000507559 BIVM-ERCC5R4GMW8 1640 aa15.19■□□□□ 0.02
GNPDA1-209ENST00000507559 CHD1O14646 1710 aa15.18■□□□□ 0.02
GNPDA1-209ENST00000507559 OSCARQ8IYS5 282 aa15.14■□□□□ 0.01
GNPDA1-209ENST00000507559 RUSC2Q8N2Y8 1516 aa15.12■□□□□ 0.01
GNPDA1-209ENST00000507559 EHMT2Q96KQ7 1210 aa15.12■□□□□ 0.01
GNPDA1-209ENST00000507559 POLA1P09884 1462 aaPredicted RBP15.11■□□□□ 0.01
GNPDA1-209ENST00000507559 ARHGEF11O15085 1522 aa15.09■□□□□ 0.01
GNPDA1-209ENST00000507559 UBTFP17480 764 aaKnown RBP15.09■□□□□ 0.01
GNPDA1-209ENST00000507559 ERICH3Q5RHP9 1530 aa15.07■□□□□ 0
GNPDA1-209ENST00000507559 WDR97A6NE52 1622 aa15.06■□□□□ 0
GNPDA1-209ENST00000507559 AQRO60306 1485 aaKnown RBP eCLIP15.06■□□□□ 0
GNPDA1-209ENST00000507559 RAD54L2Q9Y4B4 1467 aa15.04■□□□□ -0
GNPDA1-209ENST00000507559 CUX1P39880 1505 aa15.02■□□□□ -0
GNPDA1-209ENST00000507559 FGD5Q6ZNL6 1462 aa15.01□□□□□ -0.01
GNPDA1-209ENST00000507559 CLIP1P30622 1438 aa15□□□□□ -0.01
GNPDA1-209ENST00000507559 PPARGC1BQ86YN6 1023 aaKnown RBP14.99□□□□□ -0.01
GNPDA1-209ENST00000507559 PBRM1Q86U86 1689 aa14.98□□□□□ -0.01
GNPDA1-209ENST00000507559 KIF27Q86VH2 1401 aa14.98□□□□□ -0.01
GNPDA1-209ENST00000507559 PRXQ9BXM0 1461 aa14.97□□□□□ -0.01
GNPDA1-209ENST00000507559 SNAPC4Q5SXM2 1469 aa14.96□□□□□ -0.01
GNPDA1-209ENST00000507559 VPS8Q8N3P4 1428 aa14.96□□□□□ -0.01
GNPDA1-209ENST00000507559 ARAP1Q96P48 1450 aa14.95□□□□□ -0.02
GNPDA1-209ENST00000507559 CLASP1Q7Z460 1538 aa14.95□□□□□ -0.02
GNPDA1-209ENST00000507559 RAPGEF2Q9Y4G8 1499 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms