RNA–Protein interactions for RNA: ENST00000507370.5

SPOCK3-212, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 2

Gene SPOCK3, Length 1,510 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-212ENST00000507370 NISCHQ9Y2I1 1504 aa47.39■■■■■ 5.18
SPOCK3-212ENST00000507370 CCDC180Q9P1Z9 1646 aa41.59■■■■■ 4.25
SPOCK3-212ENST00000507370 ZCCHC6Q5VYS8 1495 aaKnown RBP39.83■■■■□ 3.97
SPOCK3-212ENST00000507370 ABCC9O60706 1549 aa39.76■■■■□ 3.96
SPOCK3-212ENST00000507370 DCAF1Q9Y4B6 1507 aa39.31■■■■□ 3.88
SPOCK3-212ENST00000507370 MYO15BQ96JP2 1530 aa38.89■■■■□ 3.82
SPOCK3-212ENST00000507370 DCAF8L2P0C7V8 631 aa38.88■■■■□ 3.81
SPOCK3-212ENST00000507370 NACADO15069 1562 aa38.65■■■■□ 3.78
SPOCK3-212ENST00000507370 SHROOM4Q9ULL8 1493 aa38.36■■■■□ 3.73
SPOCK3-212ENST00000507370 RB1CC1Q8TDY2 1594 aa38.34■■■■□ 3.73
SPOCK3-212ENST00000507370 SCRIBQ14160 1630 aa38.02■■■■□ 3.68
SPOCK3-212ENST00000507370 UNC13AQ9UPW8 1703 aa37.57■■■■□ 3.6
SPOCK3-212ENST00000507370 PABPN1Q86U42 306 aaKnown RBP eCLIP37.22■■■■□ 3.55
SPOCK3-212ENST00000507370 BICRAQ9NZM4 1560 aa37.11■■■■□ 3.53
SPOCK3-212ENST00000507370 SUPT5HO00267 1087 aaKnown RBP36.87■■■■□ 3.49
SPOCK3-212ENST00000507370 BAZ1AQ9NRL2 1556 aaPredicted RBP36.68■■■■□ 3.46
SPOCK3-212ENST00000507370 CECR2Q9BXF3 1484 aa36.68■■■■□ 3.46
SPOCK3-212ENST00000507370 RSF1Q96T23 1441 aaPredicted RBP36.63■■■■□ 3.45
SPOCK3-212ENST00000507370 MROH2BQ7Z745 1585 aa36.53■■■■□ 3.44
SPOCK3-212ENST00000507370 SMARCA4P51532 1647 aa36.51■■■■□ 3.43
SPOCK3-212ENST00000507370 DNAJC5BQ9UF47 199 aa36.42■■■■□ 3.42
SPOCK3-212ENST00000507370 WIZO95785 1651 aa36.29■■■■□ 3.4
SPOCK3-212ENST00000507370 EIF4G1Q04637 1599 aaKnown RBP36.15■■■■□ 3.38
SPOCK3-212ENST00000507370 PEG3Q9GZU2 1588 aa36.1■■■■□ 3.37
SPOCK3-212ENST00000507370 TOP2AP11388 1531 aaKnown RBP36■■■■□ 3.35
SPOCK3-212ENST00000507370 SMARCA2P51531 1590 aa35.95■■■■□ 3.35
SPOCK3-212ENST00000507370 CC2D2AQ9P2K1 1620 aa35.95■■■■□ 3.35
SPOCK3-212ENST00000507370 ATAD2BQ9ULI0 1458 aa35.82■■■■□ 3.32
SPOCK3-212ENST00000507370 BAZ1BQ9UIG0 1483 aaKnown RBP35.68■■■■□ 3.3
SPOCK3-212ENST00000507370 HMGXB3Q12766 1538 aa35.63■■■■□ 3.29
SPOCK3-212ENST00000507370 NCAPD3P42695 1498 aa35.55■■■■□ 3.28
SPOCK3-212ENST00000507370 CCDC88BA6NC98 1476 aa35.48■■■■□ 3.27
SPOCK3-212ENST00000507370 CHIC1Q5VXU3 224 aa35.29■■■■□ 3.24
SPOCK3-212ENST00000507370 PRDM2Q13029 1718 aa34.85■■■■□ 3.17
SPOCK3-212ENST00000507370 TRIM41Q8WV44 630 aa34.77■■■■□ 3.16
SPOCK3-212ENST00000507370 CFTRP13569 1480 aa34.74■■■■□ 3.15
SPOCK3-212ENST00000507370 ABCC8Q09428 1581 aa34.71■■■■□ 3.15
SPOCK3-212ENST00000507370 CADPSQ9ULU8 1353 aa34.59■■■■□ 3.13
SPOCK3-212ENST00000507370 WRNQ14191 1432 aaPredicted RBP eCLIP34.56■■■■□ 3.12
SPOCK3-212ENST00000507370 LAMC3Q9Y6N6 1575 aa34.48■■■■□ 3.11
SPOCK3-212ENST00000507370 SYNJ1O43426 1573 aa34.43■■■■□ 3.1
SPOCK3-212ENST00000507370 NESP48681 1621 aa34.41■■■■□ 3.1
SPOCK3-212ENST00000507370 BIVM-ERCC5R4GMW8 1640 aa34.4■■■■□ 3.1
SPOCK3-212ENST00000507370 TOP2BQ02880 1626 aa34.37■■■■□ 3.09
SPOCK3-212ENST00000507370 ERCC6Q03468 1493 aa34.31■■■■□ 3.08
SPOCK3-212ENST00000507370 PDS5BQ9NTI5 1447 aa34.26■■■■□ 3.08
SPOCK3-212ENST00000507370 FANCD2Q9BXW9 1451 aa34.25■■■■□ 3.07
SPOCK3-212ENST00000507370 CUX1P39880 1505 aa34.2■■■■□ 3.06
SPOCK3-212ENST00000507370 EEA1Q15075 1411 aa34.16■■■■□ 3.06
SPOCK3-212ENST00000507370 CEP164Q9UPV0 1460 aa34.1■■■■□ 3.05
SPOCK3-212ENST00000507370 DNMBPQ6XZF7 1577 aa34.04■■■■□ 3.04
SPOCK3-212ENST00000507370 KIF21AQ7Z4S6 1674 aa34.02■■■■□ 3.04
SPOCK3-212ENST00000507370 FAM9AQ8IZU1 332 aaPredicted RBP33.99■■■■□ 3.03
SPOCK3-212ENST00000507370 SOGA1O94964 1423 aa33.97■■■■□ 3.03
SPOCK3-212ENST00000507370 CUX2O14529 1486 aa33.93■■■■□ 3.02
SPOCK3-212ENST00000507370 TOPBP1Q92547 1522 aa33.88■■■■□ 3.01
SPOCK3-212ENST00000507370 FGD5Q6ZNL6 1462 aa33.85■■■■□ 3.01
SPOCK3-212ENST00000507370 THOC2Q8NI27 1593 aaKnown RBP33.83■■■■□ 3.01
SPOCK3-212ENST00000507370 MRC2Q9UBG0 1479 aa33.83■■■■□ 3.01
SPOCK3-212ENST00000507370 RUSC2Q8N2Y8 1516 aa33.82■■■■□ 3
SPOCK3-212ENST00000507370 LOC105371045A0A1W2PR82 267 aa33.81■■■■□ 3
SPOCK3-212ENST00000507370 URB2Q14146 1524 aaKnown RBP33.8■■■■□ 3
SPOCK3-212ENST00000507370 CSRNP3Q8WYN3 585 aa33.75■■■□□ 2.99
SPOCK3-212ENST00000507370 KIF27Q86VH2 1401 aa33.73■■■□□ 2.99
SPOCK3-212ENST00000507370 KIF21BO75037 1637 aa33.72■■■□□ 2.99
SPOCK3-212ENST00000507370 POLA1P09884 1462 aaPredicted RBP33.69■■■□□ 2.98
SPOCK3-212ENST00000507370 WDR62O43379 1518 aa33.68■■■□□ 2.98
SPOCK3-212ENST00000507370 GOLGA3Q08378 1498 aa33.62■■■□□ 2.97
SPOCK3-212ENST00000507370 WDR97A6NE52 1622 aa33.61■■■□□ 2.97
SPOCK3-212ENST00000507370 ABCA10Q8WWZ4 1543 aa33.59■■■□□ 2.97
SPOCK3-212ENST00000507370 ERICH3Q5RHP9 1530 aa33.51■■■□□ 2.95
SPOCK3-212ENST00000507370 RAD54L2Q9Y4B4 1467 aa33.48■■■□□ 2.95
SPOCK3-212ENST00000507370 PRXQ9BXM0 1461 aa33.43■■■□□ 2.94
SPOCK3-212ENST00000507370 EHMT2Q96KQ7 1210 aa33.43■■■□□ 2.94
SPOCK3-212ENST00000507370 TARBP1Q13395 1621 aaKnown RBP33.42■■■□□ 2.94
SPOCK3-212ENST00000507370 TNIKQ9UKE5 1360 aa33.42■■■□□ 2.94
SPOCK3-212ENST00000507370 ABCA5Q8WWZ7 1642 aa33.39■■■□□ 2.94
SPOCK3-212ENST00000507370 RAPGEF2Q9Y4G8 1499 aa33.35■■■□□ 2.93
SPOCK3-212ENST00000507370 CUL7Q14999 1698 aa33.34■■■□□ 2.93
SPOCK3-212ENST00000507370 UBTFP17480 764 aaKnown RBP33.3■■■□□ 2.92
SPOCK3-212ENST00000507370 IFT140Q96RY7 1462 aa33.29■■■□□ 2.92
SPOCK3-212ENST00000507370 IGF1RP08069 1367 aa33.29■■■□□ 2.92
SPOCK3-212ENST00000507370 CEP162Q5TB80 1403 aa33.24■■■□□ 2.91
SPOCK3-212ENST00000507370 GAPVD1Q14C86 1478 aa33.23■■■□□ 2.91
SPOCK3-212ENST00000507370 PBRM1Q86U86 1689 aa33.21■■■□□ 2.91
SPOCK3-212ENST00000507370 CARMIL1Q5VZK9 1371 aa33.18■■■□□ 2.9
SPOCK3-212ENST00000507370 TDRD9Q8NDG6 1382 aaKnown RBP33.13■■■□□ 2.89
SPOCK3-212ENST00000507370 EIF4G3O43432 1585 aaKnown RBP33.03■■■□□ 2.88
SPOCK3-212ENST00000507370 GRIN2BQ13224 1484 aa33.02■■■□□ 2.88
SPOCK3-212ENST00000507370 CLIP1P30622 1438 aa33■■■□□ 2.87
SPOCK3-212ENST00000507370 CTTNBP2Q8WZ74 1663 aa32.98■■■□□ 2.87
SPOCK3-212ENST00000507370 ZNF608Q9ULD9 1512 aaPredicted RBP32.97■■■□□ 2.87
SPOCK3-212ENST00000507370 ADAMTS12P58397 1594 aa32.96■■■□□ 2.87
SPOCK3-212ENST00000507370 AQRO60306 1485 aaKnown RBP eCLIP32.95■■■□□ 2.86
SPOCK3-212ENST00000507370 FHAD1B1AJZ9 1412 aa32.89■■■□□ 2.86
SPOCK3-212ENST00000507370 DNAJC5Q9H3Z4 198 aa32.81■■■□□ 2.84
SPOCK3-212ENST00000507370 MAGI1Q96QZ7 1491 aaPredicted RBP32.8■■■□□ 2.84
SPOCK3-212ENST00000507370 SNAPC4Q5SXM2 1469 aa32.76■■■□□ 2.83
SPOCK3-212ENST00000507370 VPS8Q8N3P4 1428 aa32.74■■■□□ 2.83
SPOCK3-212ENST00000507370 EFCAB5A4FU69 1503 aa32.71■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms