RNA–Protein interactions for RNA: ENST00000507313.5

LINC00939-202, long intergenic non-protein coding RNA 939, humanhuman

TSL 2 BASIC

Gene LINC00939, Length 2,819 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00939-202ENST00000507313 NISCHQ9Y2I1 1504 aa20.42■□□□□ 0.86
LINC00939-202ENST00000507313 CCDC180Q9P1Z9 1646 aa17.84■□□□□ 0.45
LINC00939-202ENST00000507313 ABCC9O60706 1549 aa17.72■□□□□ 0.43
LINC00939-202ENST00000507313 DCAF8L2P0C7V8 631 aa17.45■□□□□ 0.38
LINC00939-202ENST00000507313 ZCCHC6Q5VYS8 1495 aaKnown RBP16.99■□□□□ 0.31
LINC00939-202ENST00000507313 NACADO15069 1562 aa16.89■□□□□ 0.29
LINC00939-202ENST00000507313 RB1CC1Q8TDY2 1594 aa16.89■□□□□ 0.29
LINC00939-202ENST00000507313 MYO15BQ96JP2 1530 aa16.77■□□□□ 0.27
LINC00939-202ENST00000507313 DCAF1Q9Y4B6 1507 aa16.77■□□□□ 0.27
LINC00939-202ENST00000507313 PABPN1Q86U42 306 aaKnown RBP eCLIP16.75■□□□□ 0.27
LINC00939-202ENST00000507313 SCRIBQ14160 1630 aa16.53■□□□□ 0.24
LINC00939-202ENST00000507313 SHROOM4Q9ULL8 1493 aa16.53■□□□□ 0.24
LINC00939-202ENST00000507313 BICRAQ9NZM4 1560 aa16.38■□□□□ 0.21
LINC00939-202ENST00000507313 UNC13AQ9UPW8 1703 aa16.37■□□□□ 0.21
LINC00939-202ENST00000507313 DNAJC5BQ9UF47 199 aa16.28■□□□□ 0.2
LINC00939-202ENST00000507313 CECR2Q9BXF3 1484 aa16.01■□□□□ 0.15
LINC00939-202ENST00000507313 EIF4G1Q04637 1599 aaKnown RBP15.97■□□□□ 0.15
LINC00939-202ENST00000507313 CC2D2AQ9P2K1 1620 aa15.88■□□□□ 0.13
LINC00939-202ENST00000507313 MROH2BQ7Z745 1585 aa15.79■□□□□ 0.12
LINC00939-202ENST00000507313 BAZ1AQ9NRL2 1556 aaPredicted RBP15.78■□□□□ 0.12
LINC00939-202ENST00000507313 SMARCA4P51532 1647 aa15.74■□□□□ 0.11
LINC00939-202ENST00000507313 ATAD2BQ9ULI0 1458 aa15.74■□□□□ 0.11
LINC00939-202ENST00000507313 RSF1Q96T23 1441 aaPredicted RBP15.7■□□□□ 0.1
LINC00939-202ENST00000507313 SUPT5HO00267 1087 aaKnown RBP15.69■□□□□ 0.1
LINC00939-202ENST00000507313 NCAPD3P42695 1498 aa15.69■□□□□ 0.1
LINC00939-202ENST00000507313 SMARCA2P51531 1590 aa15.63■□□□□ 0.09
LINC00939-202ENST00000507313 BAZ1BQ9UIG0 1483 aaKnown RBP15.61■□□□□ 0.09
LINC00939-202ENST00000507313 WIZO95785 1651 aa15.57■□□□□ 0.08
LINC00939-202ENST00000507313 PEG3Q9GZU2 1588 aa15.52■□□□□ 0.08
LINC00939-202ENST00000507313 HMGXB3Q12766 1538 aa15.49■□□□□ 0.07
LINC00939-202ENST00000507313 TOP2AP11388 1531 aaKnown RBP15.36■□□□□ 0.05
LINC00939-202ENST00000507313 NESP48681 1621 aa15.36■□□□□ 0.05
LINC00939-202ENST00000507313 SLC24A1O60721 1099 aa15.35■□□□□ 0.05
LINC00939-202ENST00000507313 CADPSQ9ULU8 1353 aa15.32■□□□□ 0.04
LINC00939-202ENST00000507313 CCDC88BA6NC98 1476 aa15.32■□□□□ 0.04
LINC00939-202ENST00000507313 ERCC6Q03468 1493 aa15.24■□□□□ 0.03
LINC00939-202ENST00000507313 PDS5BQ9NTI5 1447 aa15.19■□□□□ 0.02
LINC00939-202ENST00000507313 CFTRP13569 1480 aa15.18■□□□□ 0.02
LINC00939-202ENST00000507313 LAMC3Q9Y6N6 1575 aa15.14■□□□□ 0.01
LINC00939-202ENST00000507313 FANCD2Q9BXW9 1451 aa15.1■□□□□ 0.01
LINC00939-202ENST00000507313 CEP164Q9UPV0 1460 aa15.03■□□□□ -0
LINC00939-202ENST00000507313 KIF21AQ7Z4S6 1674 aa14.96□□□□□ -0.01
LINC00939-202ENST00000507313 MRC2Q9UBG0 1479 aa14.96□□□□□ -0.01
LINC00939-202ENST00000507313 URB2Q14146 1524 aaKnown RBP14.91□□□□□ -0.02
LINC00939-202ENST00000507313 CUX2O14529 1486 aa14.88□□□□□ -0.03
LINC00939-202ENST00000507313 THOC2Q8NI27 1593 aaKnown RBP14.87□□□□□ -0.03
LINC00939-202ENST00000507313 TOPBP1Q92547 1522 aa14.84□□□□□ -0.03
LINC00939-202ENST00000507313 WDR62O43379 1518 aa14.83□□□□□ -0.04
LINC00939-202ENST00000507313 WRNQ14191 1432 aaPredicted RBP eCLIP14.8□□□□□ -0.04
LINC00939-202ENST00000507313 ABCC8Q09428 1581 aa14.8□□□□□ -0.04
LINC00939-202ENST00000507313 SOGA1O94964 1423 aa14.77□□□□□ -0.04
LINC00939-202ENST00000507313 CUX1P39880 1505 aa14.77□□□□□ -0.05
LINC00939-202ENST00000507313 RAD54L2Q9Y4B4 1467 aa14.76□□□□□ -0.05
LINC00939-202ENST00000507313 TDRD9Q8NDG6 1382 aaKnown RBP14.75□□□□□ -0.05
LINC00939-202ENST00000507313 DNMBPQ6XZF7 1577 aa14.75□□□□□ -0.05
LINC00939-202ENST00000507313 PRDM2Q13029 1718 aa14.74□□□□□ -0.05
LINC00939-202ENST00000507313 POLA1P09884 1462 aaPredicted RBP14.74□□□□□ -0.05
LINC00939-202ENST00000507313 TRIM41Q8WV44 630 aa14.74□□□□□ -0.05
LINC00939-202ENST00000507313 FGD5Q6ZNL6 1462 aa14.73□□□□□ -0.05
LINC00939-202ENST00000507313 ZNF608Q9ULD9 1512 aaPredicted RBP14.71□□□□□ -0.05
LINC00939-202ENST00000507313 AQRO60306 1485 aaKnown RBP eCLIP14.7□□□□□ -0.06
LINC00939-202ENST00000507313 IFT140Q96RY7 1462 aa14.7□□□□□ -0.06
LINC00939-202ENST00000507313 FBLN2P98095 1184 aa14.67□□□□□ -0.06
LINC00939-202ENST00000507313 SYNJ1O43426 1573 aa14.66□□□□□ -0.06
LINC00939-202ENST00000507313 CHIC1Q5VXU3 224 aa14.63□□□□□ -0.07
LINC00939-202ENST00000507313 TOP2BQ02880 1626 aa14.6□□□□□ -0.07
LINC00939-202ENST00000507313 TARBP1Q13395 1621 aaKnown RBP14.57□□□□□ -0.08
LINC00939-202ENST00000507313 CHMP7Q8WUX9 453 aaPredicted RBP14.56□□□□□ -0.08
LINC00939-202ENST00000507313 FAM9AQ8IZU1 332 aaPredicted RBP14.55□□□□□ -0.08
LINC00939-202ENST00000507313 ABCA10Q8WWZ4 1543 aa14.54□□□□□ -0.08
LINC00939-202ENST00000507313 OSCARQ8IYS5 282 aa14.54□□□□□ -0.08
LINC00939-202ENST00000507313 GAPVD1Q14C86 1478 aa14.54□□□□□ -0.08
LINC00939-202ENST00000507313 BIVM-ERCC5R4GMW8 1640 aa14.52□□□□□ -0.08
LINC00939-202ENST00000507313 DNAJC5Q9H3Z4 198 aa14.5□□□□□ -0.09
LINC00939-202ENST00000507313 EIF4G3O43432 1585 aaKnown RBP14.49□□□□□ -0.09
LINC00939-202ENST00000507313 GRIN2BQ13224 1484 aa14.49□□□□□ -0.09
LINC00939-202ENST00000507313 KIF27Q86VH2 1401 aa14.48□□□□□ -0.09
LINC00939-202ENST00000507313 HRCP23327 699 aa14.48□□□□□ -0.09
LINC00939-202ENST00000507313 IGF1RP08069 1367 aa14.47□□□□□ -0.09
LINC00939-202ENST00000507313 SNAPC4Q5SXM2 1469 aa14.47□□□□□ -0.09
LINC00939-202ENST00000507313 RUSC2Q8N2Y8 1516 aa14.46□□□□□ -0.09
LINC00939-202ENST00000507313 EHMT2Q96KQ7 1210 aa14.44□□□□□ -0.1
LINC00939-202ENST00000507313 CSRNP3Q8WYN3 585 aa14.39□□□□□ -0.11
LINC00939-202ENST00000507313 MAGI1Q96QZ7 1491 aaPredicted RBP14.38□□□□□ -0.11
LINC00939-202ENST00000507313 CARMIL1Q5VZK9 1371 aa14.38□□□□□ -0.11
LINC00939-202ENST00000507313 ABCA5Q8WWZ7 1642 aa14.37□□□□□ -0.11
LINC00939-202ENST00000507313 SYNJ2O15056 1496 aa14.36□□□□□ -0.11
LINC00939-202ENST00000507313 FHAD1B1AJZ9 1412 aa14.36□□□□□ -0.11
LINC00939-202ENST00000507313 WDR97A6NE52 1622 aa14.36□□□□□ -0.11
LINC00939-202ENST00000507313 PCGF6Q9BYE7 350 aa14.34□□□□□ -0.11
LINC00939-202ENST00000507313 ERICH3Q5RHP9 1530 aa14.33□□□□□ -0.12
LINC00939-202ENST00000507313 GRIN2AQ12879 1464 aa14.29□□□□□ -0.12
LINC00939-202ENST00000507313 JPH4Q96JJ6 628 aa14.28□□□□□ -0.12
LINC00939-202ENST00000507313 PBRM1Q86U86 1689 aa14.27□□□□□ -0.12
LINC00939-202ENST00000507313 RANGAP1P46060 587 aaPredicted RBP14.27□□□□□ -0.12
LINC00939-202ENST00000507313 CYB5RLQ6IPT4 315 aa14.26□□□□□ -0.13
LINC00939-202ENST00000507313 PPARGC1BQ86YN6 1023 aaKnown RBP14.26□□□□□ -0.13
LINC00939-202ENST00000507313 ADAMTS12P58397 1594 aa14.25□□□□□ -0.13
LINC00939-202ENST00000507313 TTBK1Q5TCY1 1321 aaPredicted RBP14.24□□□□□ -0.13
LINC00939-202ENST00000507313 UBTFP17480 764 aaKnown RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms