RNA–Protein interactions for RNA: ENST00000507148.1

ATR-203, Transcript of ATR serine/threonine kinase, humanhuman

TSL 3

Gene ATR, Length 724 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATR-203ENST00000507148 NISCHQ9Y2I1 1504 aa33.61■■■□□ 2.97
ATR-203ENST00000507148 CCDC180Q9P1Z9 1646 aa29.8■■■□□ 2.36
ATR-203ENST00000507148 ABCC9O60706 1549 aa28.79■■■□□ 2.2
ATR-203ENST00000507148 ZCCHC6Q5VYS8 1495 aaKnown RBP28.05■■■□□ 2.08
ATR-203ENST00000507148 NACADO15069 1562 aa27.94■■■□□ 2.06
ATR-203ENST00000507148 MYO15BQ96JP2 1530 aa27.92■■■□□ 2.06
ATR-203ENST00000507148 RB1CC1Q8TDY2 1594 aa27.88■■■□□ 2.05
ATR-203ENST00000507148 DCAF1Q9Y4B6 1507 aa27.87■■■□□ 2.05
ATR-203ENST00000507148 DCAF8L2P0C7V8 631 aa27.87■■■□□ 2.05
ATR-203ENST00000507148 UNC13AQ9UPW8 1703 aa27.27■■□□□ 1.96
ATR-203ENST00000507148 SCRIBQ14160 1630 aa27.12■■□□□ 1.93
ATR-203ENST00000507148 BICRAQ9NZM4 1560 aa27.02■■□□□ 1.92
ATR-203ENST00000507148 PABPN1Q86U42 306 aaKnown RBP eCLIP26.93■■□□□ 1.9
ATR-203ENST00000507148 SHROOM4Q9ULL8 1493 aa26.82■■□□□ 1.88
ATR-203ENST00000507148 EIF4G1Q04637 1599 aaKnown RBP26.28■■□□□ 1.8
ATR-203ENST00000507148 DNAJC5BQ9UF47 199 aa26.19■■□□□ 1.78
ATR-203ENST00000507148 CECR2Q9BXF3 1484 aa26.11■■□□□ 1.77
ATR-203ENST00000507148 CC2D2AQ9P2K1 1620 aa26.1■■□□□ 1.77
ATR-203ENST00000507148 BAZ1AQ9NRL2 1556 aaPredicted RBP26.03■■□□□ 1.76
ATR-203ENST00000507148 SMARCA4P51532 1647 aa26.02■■□□□ 1.76
ATR-203ENST00000507148 MROH2BQ7Z745 1585 aa25.87■■□□□ 1.73
ATR-203ENST00000507148 SMARCA2P51531 1590 aa25.81■■□□□ 1.72
ATR-203ENST00000507148 PEG3Q9GZU2 1588 aa25.81■■□□□ 1.72
ATR-203ENST00000507148 ATAD2BQ9ULI0 1458 aa25.8■■□□□ 1.72
ATR-203ENST00000507148 NCAPD3P42695 1498 aa25.78■■□□□ 1.72
ATR-203ENST00000507148 RSF1Q96T23 1441 aaPredicted RBP25.69■■□□□ 1.7
ATR-203ENST00000507148 HMGXB3Q12766 1538 aa25.67■■□□□ 1.7
ATR-203ENST00000507148 WIZO95785 1651 aa25.61■■□□□ 1.69
ATR-203ENST00000507148 BAZ1BQ9UIG0 1483 aaKnown RBP25.59■■□□□ 1.69
ATR-203ENST00000507148 TOP2AP11388 1531 aaKnown RBP25.37■■□□□ 1.65
ATR-203ENST00000507148 SUPT5HO00267 1087 aaKnown RBP25.17■■□□□ 1.62
ATR-203ENST00000507148 CCDC88BA6NC98 1476 aa25.07■■□□□ 1.6
ATR-203ENST00000507148 LAMC3Q9Y6N6 1575 aa25.05■■□□□ 1.6
ATR-203ENST00000507148 CADPSQ9ULU8 1353 aa25.02■■□□□ 1.6
ATR-203ENST00000507148 NESP48681 1621 aa25■■□□□ 1.59
ATR-203ENST00000507148 CFTRP13569 1480 aa24.94■■□□□ 1.58
ATR-203ENST00000507148 PDS5BQ9NTI5 1447 aa24.86■■□□□ 1.57
ATR-203ENST00000507148 PRDM2Q13029 1718 aa24.81■■□□□ 1.56
ATR-203ENST00000507148 ERCC6Q03468 1493 aa24.8■■□□□ 1.56
ATR-203ENST00000507148 KIF21AQ7Z4S6 1674 aa24.75■■□□□ 1.55
ATR-203ENST00000507148 FANCD2Q9BXW9 1451 aa24.7■■□□□ 1.55
ATR-203ENST00000507148 CEP164Q9UPV0 1460 aa24.65■■□□□ 1.54
ATR-203ENST00000507148 THOC2Q8NI27 1593 aaKnown RBP24.6■■□□□ 1.53
ATR-203ENST00000507148 MRC2Q9UBG0 1479 aa24.56■■□□□ 1.52
ATR-203ENST00000507148 CUX2O14529 1486 aa24.5■■□□□ 1.51
ATR-203ENST00000507148 WDR62O43379 1518 aa24.5■■□□□ 1.51
ATR-203ENST00000507148 URB2Q14146 1524 aaKnown RBP24.44■■□□□ 1.5
ATR-203ENST00000507148 ABCC8Q09428 1581 aa24.42■■□□□ 1.5
ATR-203ENST00000507148 DNMBPQ6XZF7 1577 aa24.36■■□□□ 1.49
ATR-203ENST00000507148 TOPBP1Q92547 1522 aa24.35■■□□□ 1.49
ATR-203ENST00000507148 CUX1P39880 1505 aa24.26■■□□□ 1.47
ATR-203ENST00000507148 WRNQ14191 1432 aaPredicted RBP eCLIP24.21■■□□□ 1.47
ATR-203ENST00000507148 POLA1P09884 1462 aaPredicted RBP24.16■■□□□ 1.46
ATR-203ENST00000507148 TOP2BQ02880 1626 aa24.16■■□□□ 1.46
ATR-203ENST00000507148 BIVM-ERCC5R4GMW8 1640 aa24.16■■□□□ 1.46
ATR-203ENST00000507148 IFT140Q96RY7 1462 aa24.14■■□□□ 1.46
ATR-203ENST00000507148 FGD5Q6ZNL6 1462 aa24.13■■□□□ 1.45
ATR-203ENST00000507148 SYNJ1O43426 1573 aa24.12■■□□□ 1.45
ATR-203ENST00000507148 TARBP1Q13395 1621 aaKnown RBP24.08■■□□□ 1.45
ATR-203ENST00000507148 SOGA1O94964 1423 aa24.07■■□□□ 1.44
ATR-203ENST00000507148 RAD54L2Q9Y4B4 1467 aa24.02■■□□□ 1.44
ATR-203ENST00000507148 ZNF608Q9ULD9 1512 aaPredicted RBP23.97■■□□□ 1.43
ATR-203ENST00000507148 WDR97A6NE52 1622 aa23.96■■□□□ 1.43
ATR-203ENST00000507148 ABCA10Q8WWZ4 1543 aa23.94■■□□□ 1.42
ATR-203ENST00000507148 EIF4G3O43432 1585 aaKnown RBP23.91■■□□□ 1.42
ATR-203ENST00000507148 TDRD9Q8NDG6 1382 aaKnown RBP23.87■■□□□ 1.41
ATR-203ENST00000507148 AQRO60306 1485 aaKnown RBP eCLIP23.87■■□□□ 1.41
ATR-203ENST00000507148 ABCA5Q8WWZ7 1642 aa23.82■■□□□ 1.4
ATR-203ENST00000507148 TRIM41Q8WV44 630 aa23.82■■□□□ 1.4
ATR-203ENST00000507148 GAPVD1Q14C86 1478 aa23.8■■□□□ 1.4
ATR-203ENST00000507148 GRIN2BQ13224 1484 aa23.76■■□□□ 1.39
ATR-203ENST00000507148 PBRM1Q86U86 1689 aa23.73■■□□□ 1.39
ATR-203ENST00000507148 CHIC1Q5VXU3 224 aa23.71■■□□□ 1.39
ATR-203ENST00000507148 KIF27Q86VH2 1401 aa23.69■■□□□ 1.38
ATR-203ENST00000507148 MAGI1Q96QZ7 1491 aaPredicted RBP23.68■■□□□ 1.38
ATR-203ENST00000507148 ERICH3Q5RHP9 1530 aa23.68■■□□□ 1.38
ATR-203ENST00000507148 SNAPC4Q5SXM2 1469 aa23.65■■□□□ 1.38
ATR-203ENST00000507148 SYNJ2O15056 1496 aa23.58■■□□□ 1.37
ATR-203ENST00000507148 IGF1RP08069 1367 aa23.57■■□□□ 1.36
ATR-203ENST00000507148 CHD1O14646 1710 aa23.56■■□□□ 1.36
ATR-203ENST00000507148 ADAMTS12P58397 1594 aa23.55■■□□□ 1.36
ATR-203ENST00000507148 FHAD1B1AJZ9 1412 aa23.54■■□□□ 1.36
ATR-203ENST00000507148 OSCARQ8IYS5 282 aa23.53■■□□□ 1.36
ATR-203ENST00000507148 CHMP7Q8WUX9 453 aaPredicted RBP23.53■■□□□ 1.36
ATR-203ENST00000507148 RUSC2Q8N2Y8 1516 aa23.52■■□□□ 1.36
ATR-203ENST00000507148 CUL7Q14999 1698 aa23.51■■□□□ 1.35
ATR-203ENST00000507148 FBLN2P98095 1184 aa23.5■■□□□ 1.35
ATR-203ENST00000507148 GRIN2AQ12879 1464 aa23.45■■□□□ 1.34
ATR-203ENST00000507148 EEA1Q15075 1411 aa23.45■■□□□ 1.34
ATR-203ENST00000507148 CARMIL1Q5VZK9 1371 aa23.43■■□□□ 1.34
ATR-203ENST00000507148 DNAJC5Q9H3Z4 198 aa23.42■■□□□ 1.34
ATR-203ENST00000507148 NUP160Q12769 1436 aa23.35■■□□□ 1.33
ATR-203ENST00000507148 CSRNP3Q8WYN3 585 aa23.35■■□□□ 1.33
ATR-203ENST00000507148 PRXQ9BXM0 1461 aa23.32■■□□□ 1.32
ATR-203ENST00000507148 RAPGEF2Q9Y4G8 1499 aa23.32■■□□□ 1.32
ATR-203ENST00000507148 CLASP1Q7Z460 1538 aa23.32■■□□□ 1.32
ATR-203ENST00000507148 CEP170Q5SW79 1584 aa23.31■■□□□ 1.32
ATR-203ENST00000507148 FAM9AQ8IZU1 332 aaPredicted RBP23.24■■□□□ 1.31
ATR-203ENST00000507148 KIAA0586Q9BVV6 1533 aa23.2■■□□□ 1.3
ATR-203ENST00000507148 KIF21BO75037 1637 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 157.6 ms