RNA–Protein interactions for RNA: ENST00000506862.1

LINC01411-202, Transcript of long intergenic non-protein coding RNA 1411, humanhuman

TSL 3 BASIC

Gene LINC01411, Length 744 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01411-202ENST00000506862 AEBP2Q6ZN18 517 aaPredicted RBP20.59■□□□□ 0.89
LINC01411-202ENST00000506862 NISCHQ9Y2I1 1504 aa20.31■□□□□ 0.84
LINC01411-202ENST00000506862 CHIC1Q5VXU3 224 aa19.85■□□□□ 0.77
LINC01411-202ENST00000506862 CCDC180Q9P1Z9 1646 aa17.82■□□□□ 0.44
LINC01411-202ENST00000506862 SENP3Q9H4L4 574 aaPredicted RBP17.56■□□□□ 0.4
LINC01411-202ENST00000506862 PHF23Q9BUL5 403 aaPredicted RBP17.41■□□□□ 0.38
LINC01411-202ENST00000506862 ABCC9O60706 1549 aa17.01■□□□□ 0.31
LINC01411-202ENST00000506862 ZCCHC6Q5VYS8 1495 aaKnown RBP16.99■□□□□ 0.31
LINC01411-202ENST00000506862 DCAF8L2P0C7V8 631 aa16.94■□□□□ 0.3
LINC01411-202ENST00000506862 DCAF1Q9Y4B6 1507 aa16.8■□□□□ 0.28
LINC01411-202ENST00000506862 MYO15BQ96JP2 1530 aa16.68■□□□□ 0.26
LINC01411-202ENST00000506862 NACADO15069 1562 aa16.67■□□□□ 0.26
LINC01411-202ENST00000506862 RB1CC1Q8TDY2 1594 aa16.57■□□□□ 0.24
LINC01411-202ENST00000506862 SHROOM4Q9ULL8 1493 aa16.43■□□□□ 0.22
LINC01411-202ENST00000506862 SCRIBQ14160 1630 aa16.33■□□□□ 0.2
LINC01411-202ENST00000506862 FOXD1Q16676 465 aa16.31■□□□□ 0.2
LINC01411-202ENST00000506862 UNC13AQ9UPW8 1703 aa16.16■□□□□ 0.18
LINC01411-202ENST00000506862 PABPN1Q86U42 306 aaKnown RBP eCLIP16.02■□□□□ 0.16
LINC01411-202ENST00000506862 PLPPR3Q6T4P5 718 aa16■□□□□ 0.15
LINC01411-202ENST00000506862 BICRAQ9NZM4 1560 aa15.99■□□□□ 0.15
LINC01411-202ENST00000506862 SUPT5HO00267 1087 aaKnown RBP15.77■□□□□ 0.12
LINC01411-202ENST00000506862 CECR2Q9BXF3 1484 aa15.76■□□□□ 0.11
LINC01411-202ENST00000506862 BAZ1AQ9NRL2 1556 aaPredicted RBP15.72■□□□□ 0.11
LINC01411-202ENST00000506862 RSF1Q96T23 1441 aaPredicted RBP15.67■□□□□ 0.1
LINC01411-202ENST00000506862 MROH2BQ7Z745 1585 aa15.66■□□□□ 0.1
LINC01411-202ENST00000506862 SMARCA4P51532 1647 aa15.65■□□□□ 0.1
LINC01411-202ENST00000506862 EIF4G1Q04637 1599 aaKnown RBP15.56■□□□□ 0.08
LINC01411-202ENST00000506862 WIZO95785 1651 aa15.53■□□□□ 0.08
LINC01411-202ENST00000506862 SMARCA2P51531 1590 aa15.47■□□□□ 0.07
LINC01411-202ENST00000506862 PPP6R1Q9UPN7 881 aa15.45■□□□□ 0.06
LINC01411-202ENST00000506862 ATAD2BQ9ULI0 1458 aa15.45■□□□□ 0.06
LINC01411-202ENST00000506862 PEG3Q9GZU2 1588 aa15.45■□□□□ 0.06
LINC01411-202ENST00000506862 ADRA2BP18089 450 aa15.42■□□□□ 0.06
LINC01411-202ENST00000506862 CC2D2AQ9P2K1 1620 aa15.39■□□□□ 0.05
LINC01411-202ENST00000506862 TOP2AP11388 1531 aaKnown RBP15.38■□□□□ 0.05
LINC01411-202ENST00000506862 BAZ1BQ9UIG0 1483 aaKnown RBP15.37■□□□□ 0.05
LINC01411-202ENST00000506862 NCAPD3P42695 1498 aa15.36■□□□□ 0.05
LINC01411-202ENST00000506862 HMGXB3Q12766 1538 aa15.31■□□□□ 0.04
LINC01411-202ENST00000506862 PIAS4Q8N2W9 510 aaPredicted RBP15.3■□□□□ 0.04
LINC01411-202ENST00000506862 CCDC88BA6NC98 1476 aa15.22■□□□□ 0.03
LINC01411-202ENST00000506862 MSH5O43196 834 aa15.2■□□□□ 0.02
LINC01411-202ENST00000506862 DNAJC5BQ9UF47 199 aa15.14■□□□□ 0.01
LINC01411-202ENST00000506862 CADPSQ9ULU8 1353 aa14.98□□□□□ -0.01
LINC01411-202ENST00000506862 CFTRP13569 1480 aa14.95□□□□□ -0.02
LINC01411-202ENST00000506862 LAMC3Q9Y6N6 1575 aa14.89□□□□□ -0.03
LINC01411-202ENST00000506862 TRIM41Q8WV44 630 aa14.88□□□□□ -0.03
LINC01411-202ENST00000506862 PRDM2Q13029 1718 aa14.88□□□□□ -0.03
LINC01411-202ENST00000506862 NESP48681 1621 aa14.84□□□□□ -0.03
LINC01411-202ENST00000506862 PDS5BQ9NTI5 1447 aa14.82□□□□□ -0.04
LINC01411-202ENST00000506862 ABCC8Q09428 1581 aa14.81□□□□□ -0.04
LINC01411-202ENST00000506862 WRNQ14191 1432 aaPredicted RBP eCLIP14.79□□□□□ -0.04
LINC01411-202ENST00000506862 FANCD2Q9BXW9 1451 aa14.79□□□□□ -0.04
LINC01411-202ENST00000506862 DNAJC5Q9H3Z4 198 aa14.77□□□□□ -0.05
LINC01411-202ENST00000506862 CEP164Q9UPV0 1460 aa14.73□□□□□ -0.05
LINC01411-202ENST00000506862 KIF21AQ7Z4S6 1674 aa14.68□□□□□ -0.06
LINC01411-202ENST00000506862 SYNJ1O43426 1573 aa14.67□□□□□ -0.06
LINC01411-202ENST00000506862 TOP2BQ02880 1626 aa14.66□□□□□ -0.06
LINC01411-202ENST00000506862 ERCC6Q03468 1493 aa14.66□□□□□ -0.06
LINC01411-202ENST00000506862 CUX1P39880 1505 aa14.66□□□□□ -0.06
LINC01411-202ENST00000506862 BIVM-ERCC5R4GMW8 1640 aa14.65□□□□□ -0.06
LINC01411-202ENST00000506862 DNMBPQ6XZF7 1577 aa14.62□□□□□ -0.07
LINC01411-202ENST00000506862 TOPBP1Q92547 1522 aa14.6□□□□□ -0.07
LINC01411-202ENST00000506862 MRC2Q9UBG0 1479 aa14.59□□□□□ -0.07
LINC01411-202ENST00000506862 URB2Q14146 1524 aaKnown RBP14.57□□□□□ -0.08
LINC01411-202ENST00000506862 FAM9AQ8IZU1 332 aaPredicted RBP14.57□□□□□ -0.08
LINC01411-202ENST00000506862 EEA1Q15075 1411 aa14.56□□□□□ -0.08
LINC01411-202ENST00000506862 FGD5Q6ZNL6 1462 aa14.55□□□□□ -0.08
LINC01411-202ENST00000506862 SOGA1O94964 1423 aa14.51□□□□□ -0.09
LINC01411-202ENST00000506862 POLA1P09884 1462 aaPredicted RBP14.5□□□□□ -0.09
LINC01411-202ENST00000506862 WDR62O43379 1518 aa14.49□□□□□ -0.09
LINC01411-202ENST00000506862 THOC2Q8NI27 1593 aaKnown RBP14.47□□□□□ -0.09
LINC01411-202ENST00000506862 CSRNP3Q8WYN3 585 aa14.46□□□□□ -0.09
LINC01411-202ENST00000506862 KIF27Q86VH2 1401 aa14.46□□□□□ -0.09
LINC01411-202ENST00000506862 RAD54L2Q9Y4B4 1467 aa14.45□□□□□ -0.1
LINC01411-202ENST00000506862 RUSC2Q8N2Y8 1516 aa14.44□□□□□ -0.1
LINC01411-202ENST00000506862 CUX2O14529 1486 aa14.44□□□□□ -0.1
LINC01411-202ENST00000506862 ABCA10Q8WWZ4 1543 aa14.42□□□□□ -0.1
LINC01411-202ENST00000506862 LOC105371045A0A1W2PR82 267 aa14.41□□□□□ -0.1
LINC01411-202ENST00000506862 IFT140Q96RY7 1462 aa14.39□□□□□ -0.11
LINC01411-202ENST00000506862 TARBP1Q13395 1621 aaKnown RBP14.37□□□□□ -0.11
LINC01411-202ENST00000506862 WDR97A6NE52 1622 aa14.35□□□□□ -0.11
LINC01411-202ENST00000506862 EHMT2Q96KQ7 1210 aa14.35□□□□□ -0.11
LINC01411-202ENST00000506862 TDRD9Q8NDG6 1382 aaKnown RBP14.34□□□□□ -0.11
LINC01411-202ENST00000506862 KIF21BO75037 1637 aa14.33□□□□□ -0.11
LINC01411-202ENST00000506862 GAPVD1Q14C86 1478 aa14.32□□□□□ -0.12
LINC01411-202ENST00000506862 POTEDQ86YR6 584 aa14.32□□□□□ -0.12
LINC01411-202ENST00000506862 IGF1RP08069 1367 aa14.32□□□□□ -0.12
LINC01411-202ENST00000506862 GOLGA3Q08378 1498 aa14.31□□□□□ -0.12
LINC01411-202ENST00000506862 UBTFP17480 764 aaKnown RBP14.3□□□□□ -0.12
LINC01411-202ENST00000506862 ABCA5Q8WWZ7 1642 aa14.29□□□□□ -0.12
LINC01411-202ENST00000506862 AQRO60306 1485 aaKnown RBP eCLIP14.28□□□□□ -0.12
LINC01411-202ENST00000506862 CARMIL1Q5VZK9 1371 aa14.27□□□□□ -0.12
LINC01411-202ENST00000506862 ERICH3Q5RHP9 1530 aa14.26□□□□□ -0.13
LINC01411-202ENST00000506862 ZNF608Q9ULD9 1512 aaPredicted RBP14.26□□□□□ -0.13
LINC01411-202ENST00000506862 GRIN2BQ13224 1484 aa14.25□□□□□ -0.13
LINC01411-202ENST00000506862 PRXQ9BXM0 1461 aa14.25□□□□□ -0.13
LINC01411-202ENST00000506862 CUL7Q14999 1698 aa14.24□□□□□ -0.13
LINC01411-202ENST00000506862 PBRM1Q86U86 1689 aa14.23□□□□□ -0.13
LINC01411-202ENST00000506862 TNIKQ9UKE5 1360 aa14.23□□□□□ -0.13
LINC01411-202ENST00000506862 RAPGEF2Q9Y4G8 1499 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms