RNA–Protein interactions for RNA: ENST00000506695.5

NEK11-204, Transcript of NIMA related kinase 11, humanhuman

TSL 2

Gene NEK11, Length 2,189 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK11-204ENST00000506695 NISCHQ9Y2I1 1504 aa31.27■■■□□ 2.6
NEK11-204ENST00000506695 CCDC180Q9P1Z9 1646 aa27.41■■□□□ 1.98
NEK11-204ENST00000506695 ZCCHC6Q5VYS8 1495 aaKnown RBP26.22■■□□□ 1.79
NEK11-204ENST00000506695 ABCC9O60706 1549 aa26.16■■□□□ 1.78
NEK11-204ENST00000506695 DCAF8L2P0C7V8 631 aa25.88■■□□□ 1.73
NEK11-204ENST00000506695 DCAF1Q9Y4B6 1507 aa25.82■■□□□ 1.72
NEK11-204ENST00000506695 MYO15BQ96JP2 1530 aa25.6■■□□□ 1.69
NEK11-204ENST00000506695 NACADO15069 1562 aa25.55■■□□□ 1.68
NEK11-204ENST00000506695 RB1CC1Q8TDY2 1594 aa25.41■■□□□ 1.66
NEK11-204ENST00000506695 SHROOM4Q9ULL8 1493 aa25.34■■□□□ 1.65
NEK11-204ENST00000506695 SCRIBQ14160 1630 aa25.2■■□□□ 1.62
NEK11-204ENST00000506695 UNC13AQ9UPW8 1703 aa25.02■■□□□ 1.6
NEK11-204ENST00000506695 BICRAQ9NZM4 1560 aa24.72■■□□□ 1.55
NEK11-204ENST00000506695 PABPN1Q86U42 306 aaKnown RBP eCLIP24.61■■□□□ 1.53
NEK11-204ENST00000506695 SUPT5HO00267 1087 aaKnown RBP24.55■■□□□ 1.52
NEK11-204ENST00000506695 CECR2Q9BXF3 1484 aa24.36■■□□□ 1.49
NEK11-204ENST00000506695 MROH2BQ7Z745 1585 aa24.18■■□□□ 1.46
NEK11-204ENST00000506695 RSF1Q96T23 1441 aaPredicted RBP24.15■■□□□ 1.46
NEK11-204ENST00000506695 BAZ1AQ9NRL2 1556 aaPredicted RBP24.15■■□□□ 1.46
NEK11-204ENST00000506695 SMARCA4P51532 1647 aa24.12■■□□□ 1.45
NEK11-204ENST00000506695 WIZO95785 1651 aa24■■□□□ 1.43
NEK11-204ENST00000506695 EIF4G1Q04637 1599 aaKnown RBP23.96■■□□□ 1.43
NEK11-204ENST00000506695 PEG3Q9GZU2 1588 aa23.81■■□□□ 1.4
NEK11-204ENST00000506695 CHIC1Q5VXU3 224 aa23.79■■□□□ 1.4
NEK11-204ENST00000506695 ATAD2BQ9ULI0 1458 aa23.77■■□□□ 1.39
NEK11-204ENST00000506695 SMARCA2P51531 1590 aa23.72■■□□□ 1.39
NEK11-204ENST00000506695 CC2D2AQ9P2K1 1620 aa23.69■■□□□ 1.38
NEK11-204ENST00000506695 TOP2AP11388 1531 aaKnown RBP23.69■■□□□ 1.38
NEK11-204ENST00000506695 BAZ1BQ9UIG0 1483 aaKnown RBP23.6■■□□□ 1.37
NEK11-204ENST00000506695 NCAPD3P42695 1498 aa23.58■■□□□ 1.36
NEK11-204ENST00000506695 HMGXB3Q12766 1538 aa23.54■■□□□ 1.36
NEK11-204ENST00000506695 CCDC88BA6NC98 1476 aa23.45■■□□□ 1.34
NEK11-204ENST00000506695 DNAJC5BQ9UF47 199 aa23.35■■□□□ 1.33
NEK11-204ENST00000506695 TRIM41Q8WV44 630 aa23.07■■□□□ 1.28
NEK11-204ENST00000506695 CFTRP13569 1480 aa23■■□□□ 1.27
NEK11-204ENST00000506695 CADPSQ9ULU8 1353 aa22.95■■□□□ 1.26
NEK11-204ENST00000506695 PRDM2Q13029 1718 aa22.94■■□□□ 1.26
NEK11-204ENST00000506695 NESP48681 1621 aa22.91■■□□□ 1.26
NEK11-204ENST00000506695 ABCC8Q09428 1581 aa22.91■■□□□ 1.26
NEK11-204ENST00000506695 LOC105371045A0A1W2PR82 267 aa22.88■■□□□ 1.25
NEK11-204ENST00000506695 LAMC3Q9Y6N6 1575 aa22.84■■□□□ 1.25
NEK11-204ENST00000506695 WRNQ14191 1432 aaPredicted RBP eCLIP22.72■■□□□ 1.23
NEK11-204ENST00000506695 FANCD2Q9BXW9 1451 aa22.72■■□□□ 1.23
NEK11-204ENST00000506695 SYNJ1O43426 1573 aa22.71■■□□□ 1.23
NEK11-204ENST00000506695 KIF21AQ7Z4S6 1674 aa22.67■■□□□ 1.22
NEK11-204ENST00000506695 FAM9AQ8IZU1 332 aaPredicted RBP22.63■■□□□ 1.21
NEK11-204ENST00000506695 CUX1P39880 1505 aa22.62■■□□□ 1.21
NEK11-204ENST00000506695 PDS5BQ9NTI5 1447 aa22.62■■□□□ 1.21
NEK11-204ENST00000506695 BIVM-ERCC5R4GMW8 1640 aa22.61■■□□□ 1.21
NEK11-204ENST00000506695 TOP2BQ02880 1626 aa22.6■■□□□ 1.21
NEK11-204ENST00000506695 CEP164Q9UPV0 1460 aa22.59■■□□□ 1.21
NEK11-204ENST00000506695 URB2Q14146 1524 aaKnown RBP22.49■■□□□ 1.19
NEK11-204ENST00000506695 DNMBPQ6XZF7 1577 aa22.48■■□□□ 1.19
NEK11-204ENST00000506695 TOPBP1Q92547 1522 aa22.46■■□□□ 1.19
NEK11-204ENST00000506695 EEA1Q15075 1411 aa22.45■■□□□ 1.18
NEK11-204ENST00000506695 ERCC6Q03468 1493 aa22.41■■□□□ 1.18
NEK11-204ENST00000506695 FGD5Q6ZNL6 1462 aa22.4■■□□□ 1.18
NEK11-204ENST00000506695 MRC2Q9UBG0 1479 aa22.39■■□□□ 1.18
NEK11-204ENST00000506695 SOGA1O94964 1423 aa22.39■■□□□ 1.17
NEK11-204ENST00000506695 PCGF6Q9BYE7 350 aa22.37■■□□□ 1.17
NEK11-204ENST00000506695 RUSC2Q8N2Y8 1516 aa22.36■■□□□ 1.17
NEK11-204ENST00000506695 THOC2Q8NI27 1593 aaKnown RBP22.34■■□□□ 1.17
NEK11-204ENST00000506695 POLA1P09884 1462 aaPredicted RBP22.33■■□□□ 1.17
NEK11-204ENST00000506695 WDR62O43379 1518 aa22.3■■□□□ 1.16
NEK11-204ENST00000506695 TRIM26Q12899 539 aaPredicted RBP22.28■■□□□ 1.16
NEK11-204ENST00000506695 RAD54L2Q9Y4B4 1467 aa22.28■■□□□ 1.16
NEK11-204ENST00000506695 EHMT2Q96KQ7 1210 aa22.26■■□□□ 1.15
NEK11-204ENST00000506695 CSRNP3Q8WYN3 585 aa22.25■■□□□ 1.15
NEK11-204ENST00000506695 WDR97A6NE52 1622 aa22.21■■□□□ 1.15
NEK11-204ENST00000506695 CUX2O14529 1486 aa22.18■■□□□ 1.14
NEK11-204ENST00000506695 TARBP1Q13395 1621 aaKnown RBP22.18■■□□□ 1.14
NEK11-204ENST00000506695 TNIKQ9UKE5 1360 aa22.18■■□□□ 1.14
NEK11-204ENST00000506695 ABCA10Q8WWZ4 1543 aa22.18■■□□□ 1.14
NEK11-204ENST00000506695 HRCP23327 699 aa22.17■■□□□ 1.14
NEK11-204ENST00000506695 KIF27Q86VH2 1401 aa22.14■■□□□ 1.14
NEK11-204ENST00000506695 GOLGA3Q08378 1498 aa22.14■■□□□ 1.14
NEK11-204ENST00000506695 KIF21BO75037 1637 aa22.12■■□□□ 1.13
NEK11-204ENST00000506695 CEP162Q5TB80 1403 aa22.09■■□□□ 1.13
NEK11-204ENST00000506695 ABCA5Q8WWZ7 1642 aa22.06■■□□□ 1.12
NEK11-204ENST00000506695 IFT140Q96RY7 1462 aa22.06■■□□□ 1.12
NEK11-204ENST00000506695 TDRD9Q8NDG6 1382 aaKnown RBP22.05■■□□□ 1.12
NEK11-204ENST00000506695 ZNF608Q9ULD9 1512 aaPredicted RBP22.01■■□□□ 1.11
NEK11-204ENST00000506695 IGF1RP08069 1367 aa22■■□□□ 1.11
NEK11-204ENST00000506695 UBTFP17480 764 aaKnown RBP22■■□□□ 1.11
NEK11-204ENST00000506695 GAPVD1Q14C86 1478 aa21.98■■□□□ 1.11
NEK11-204ENST00000506695 AQRO60306 1485 aaKnown RBP eCLIP21.97■■□□□ 1.11
NEK11-204ENST00000506695 PRXQ9BXM0 1461 aa21.97■■□□□ 1.11
NEK11-204ENST00000506695 PBRM1Q86U86 1689 aa21.95■■□□□ 1.11
NEK11-204ENST00000506695 RAPGEF2Q9Y4G8 1499 aa21.94■■□□□ 1.1
NEK11-204ENST00000506695 EIF4G3O43432 1585 aaKnown RBP21.93■■□□□ 1.1
NEK11-204ENST00000506695 ERICH3Q5RHP9 1530 aa21.9■■□□□ 1.1
NEK11-204ENST00000506695 CARMIL1Q5VZK9 1371 aa21.88■■□□□ 1.09
NEK11-204ENST00000506695 CUL7Q14999 1698 aa21.87■■□□□ 1.09
NEK11-204ENST00000506695 GRIN2BQ13224 1484 aa21.84■■□□□ 1.09
NEK11-204ENST00000506695 CLIP1P30622 1438 aa21.8■■□□□ 1.08
NEK11-204ENST00000506695 ADAMTS12P58397 1594 aa21.79■■□□□ 1.08
NEK11-204ENST00000506695 SNAPC4Q5SXM2 1469 aa21.76■■□□□ 1.07
NEK11-204ENST00000506695 PPARGC1BQ86YN6 1023 aaKnown RBP21.74■■□□□ 1.07
NEK11-204ENST00000506695 FHAD1B1AJZ9 1412 aa21.72■■□□□ 1.07
NEK11-204ENST00000506695 VPS8Q8N3P4 1428 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms