RNA–Protein interactions for RNA: ENST00000506222.6

LINC01016-201, Transcript of long intergenic non-protein coding RNA 1016, humanhuman

TSL 2 BASIC

Gene LINC01016, Length 3,151 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01016-201ENST00000506222 NISCHQ9Y2I1 1504 aa26■■□□□ 1.75
LINC01016-201ENST00000506222 DCAF8L2P0C7V8 631 aa22.85■■□□□ 1.25
LINC01016-201ENST00000506222 SHROOM4Q9ULL8 1493 aa22.31■■□□□ 1.16
LINC01016-201ENST00000506222 CCDC180Q9P1Z9 1646 aa22.11■■□□□ 1.13
LINC01016-201ENST00000506222 ABCC9O60706 1549 aa22.08■■□□□ 1.13
LINC01016-201ENST00000506222 ZCCHC6Q5VYS8 1495 aaKnown RBP21.72■■□□□ 1.07
LINC01016-201ENST00000506222 SUPT5HO00267 1087 aaKnown RBP21.51■■□□□ 1.03
LINC01016-201ENST00000506222 PABPN1Q86U42 306 aaKnown RBP eCLIP21.21■□□□□ 0.99
LINC01016-201ENST00000506222 SCRIBQ14160 1630 aa21.15■□□□□ 0.98
LINC01016-201ENST00000506222 DCAF1Q9Y4B6 1507 aa20.98■□□□□ 0.95
LINC01016-201ENST00000506222 NACADO15069 1562 aa20.87■□□□□ 0.93
LINC01016-201ENST00000506222 RB1CC1Q8TDY2 1594 aa20.82■□□□□ 0.92
LINC01016-201ENST00000506222 MYO15BQ96JP2 1530 aa20.64■□□□□ 0.89
LINC01016-201ENST00000506222 CECR2Q9BXF3 1484 aa20.63■□□□□ 0.89
LINC01016-201ENST00000506222 RSF1Q96T23 1441 aaPredicted RBP20.4■□□□□ 0.86
LINC01016-201ENST00000506222 MROH2BQ7Z745 1585 aa20.32■□□□□ 0.84
LINC01016-201ENST00000506222 UNC13AQ9UPW8 1703 aa20.31■□□□□ 0.84
LINC01016-201ENST00000506222 BICRAQ9NZM4 1560 aa20.28■□□□□ 0.84
LINC01016-201ENST00000506222 EHMT2Q96KQ7 1210 aa20.18■□□□□ 0.82
LINC01016-201ENST00000506222 CHIC1Q5VXU3 224 aa20.12■□□□□ 0.81
LINC01016-201ENST00000506222 WIZO95785 1651 aa20.11■□□□□ 0.81
LINC01016-201ENST00000506222 FAM9AQ8IZU1 332 aaPredicted RBP20.04■□□□□ 0.8
LINC01016-201ENST00000506222 BAZ1AQ9NRL2 1556 aaPredicted RBP19.98■□□□□ 0.79
LINC01016-201ENST00000506222 DNAJC5BQ9UF47 199 aa19.95■□□□□ 0.78
LINC01016-201ENST00000506222 SMARCA4P51532 1647 aa19.92■□□□□ 0.78
LINC01016-201ENST00000506222 TRIM41Q8WV44 630 aa19.88■□□□□ 0.77
LINC01016-201ENST00000506222 LOC105371045A0A1W2PR82 267 aa19.8■□□□□ 0.76
LINC01016-201ENST00000506222 ATAD2BQ9ULI0 1458 aa19.79■□□□□ 0.76
LINC01016-201ENST00000506222 EIF4G1Q04637 1599 aaKnown RBP19.76■□□□□ 0.75
LINC01016-201ENST00000506222 CCDC88BA6NC98 1476 aa19.75■□□□□ 0.75
LINC01016-201ENST00000506222 BAZ1BQ9UIG0 1483 aaKnown RBP19.73■□□□□ 0.75
LINC01016-201ENST00000506222 TOP2AP11388 1531 aaKnown RBP19.6■□□□□ 0.73
LINC01016-201ENST00000506222 CC2D2AQ9P2K1 1620 aa19.54■□□□□ 0.72
LINC01016-201ENST00000506222 SMARCA2P51531 1590 aa19.53■□□□□ 0.72
LINC01016-201ENST00000506222 ABCC8Q09428 1581 aa19.51■□□□□ 0.71
LINC01016-201ENST00000506222 NCAPD3P42695 1498 aa19.46■□□□□ 0.71
LINC01016-201ENST00000506222 RANGAP1P46060 587 aaPredicted RBP19.44■□□□□ 0.7
LINC01016-201ENST00000506222 PEG3Q9GZU2 1588 aa19.34■□□□□ 0.69
LINC01016-201ENST00000506222 NESP48681 1621 aa19.34■□□□□ 0.69
LINC01016-201ENST00000506222 SOGA1O94964 1423 aa19.24■□□□□ 0.67
LINC01016-201ENST00000506222 PPARGC1BQ86YN6 1023 aaKnown RBP19.24■□□□□ 0.67
LINC01016-201ENST00000506222 WRNQ14191 1432 aaPredicted RBP eCLIP19.23■□□□□ 0.67
LINC01016-201ENST00000506222 CADPSQ9ULU8 1353 aa19.21■□□□□ 0.67
LINC01016-201ENST00000506222 RUSC2Q8N2Y8 1516 aa19.2■□□□□ 0.66
LINC01016-201ENST00000506222 HMGXB3Q12766 1538 aa19.19■□□□□ 0.66
LINC01016-201ENST00000506222 TTBK1Q5TCY1 1321 aaPredicted RBP19.19■□□□□ 0.66
LINC01016-201ENST00000506222 UBTFP17480 764 aaKnown RBP19.19■□□□□ 0.66
LINC01016-201ENST00000506222 CFTRP13569 1480 aa19.08■□□□□ 0.65
LINC01016-201ENST00000506222 CSRNP3Q8WYN3 585 aa19.08■□□□□ 0.64
LINC01016-201ENST00000506222 SYNJ1O43426 1573 aa19.04■□□□□ 0.64
LINC01016-201ENST00000506222 FANCD2Q9BXW9 1451 aa19.01■□□□□ 0.63
LINC01016-201ENST00000506222 CUX1P39880 1505 aa18.92■□□□□ 0.62
LINC01016-201ENST00000506222 RAD54L2Q9Y4B4 1467 aa18.9■□□□□ 0.62
LINC01016-201ENST00000506222 TDRD9Q8NDG6 1382 aaKnown RBP18.88■□□□□ 0.61
LINC01016-201ENST00000506222 PCGF6Q9BYE7 350 aa18.86■□□□□ 0.61
LINC01016-201ENST00000506222 ERCC6Q03468 1493 aa18.83■□□□□ 0.61
LINC01016-201ENST00000506222 PDS5BQ9NTI5 1447 aa18.82■□□□□ 0.6
LINC01016-201ENST00000506222 P3H3Q8IVL6 736 aa18.82■□□□□ 0.6
LINC01016-201ENST00000506222 CUX2O14529 1486 aa18.81■□□□□ 0.6
LINC01016-201ENST00000506222 CEP164Q9UPV0 1460 aa18.81■□□□□ 0.6
LINC01016-201ENST00000506222 FGD5Q6ZNL6 1462 aa18.8■□□□□ 0.6
LINC01016-201ENST00000506222 FBLN2P98095 1184 aa18.79■□□□□ 0.6
LINC01016-201ENST00000506222 URB2Q14146 1524 aaKnown RBP18.73■□□□□ 0.59
LINC01016-201ENST00000506222 ATP1B4Q9UN42 357 aaPredicted RBP18.73■□□□□ 0.59
LINC01016-201ENST00000506222 RAPGEF2Q9Y4G8 1499 aa18.72■□□□□ 0.59
LINC01016-201ENST00000506222 TOP2BQ02880 1626 aa18.71■□□□□ 0.59
LINC01016-201ENST00000506222 TOPBP1Q92547 1522 aa18.71■□□□□ 0.59
LINC01016-201ENST00000506222 KIF27Q86VH2 1401 aa18.69■□□□□ 0.58
LINC01016-201ENST00000506222 POLA1P09884 1462 aaPredicted RBP18.68■□□□□ 0.58
LINC01016-201ENST00000506222 AQRO60306 1485 aaKnown RBP eCLIP18.65■□□□□ 0.58
LINC01016-201ENST00000506222 IGF1RP08069 1367 aa18.65■□□□□ 0.58
LINC01016-201ENST00000506222 LAMC3Q9Y6N6 1575 aa18.65■□□□□ 0.58
LINC01016-201ENST00000506222 KIF21AQ7Z4S6 1674 aa18.63■□□□□ 0.57
LINC01016-201ENST00000506222 ARID3CA6NKF2 412 aa18.61■□□□□ 0.57
LINC01016-201ENST00000506222 CEP162Q5TB80 1403 aa18.6■□□□□ 0.57
LINC01016-201ENST00000506222 CARMIL1Q5VZK9 1371 aa18.6■□□□□ 0.57
LINC01016-201ENST00000506222 GOLGA3Q08378 1498 aa18.55■□□□□ 0.56
LINC01016-201ENST00000506222 EEA1Q15075 1411 aa18.55■□□□□ 0.56
LINC01016-201ENST00000506222 ZNF608Q9ULD9 1512 aaPredicted RBP18.54■□□□□ 0.56
LINC01016-201ENST00000506222 BIVM-ERCC5R4GMW8 1640 aa18.53■□□□□ 0.56
LINC01016-201ENST00000506222 TNIKQ9UKE5 1360 aa18.52■□□□□ 0.56
LINC01016-201ENST00000506222 DNMBPQ6XZF7 1577 aa18.52■□□□□ 0.56
LINC01016-201ENST00000506222 MRC2Q9UBG0 1479 aa18.5■□□□□ 0.55
LINC01016-201ENST00000506222 CLIP1P30622 1438 aa18.48■□□□□ 0.55
LINC01016-201ENST00000506222 APLP2Q06481 763 aa18.46■□□□□ 0.55
LINC01016-201ENST00000506222 CHMP7Q8WUX9 453 aaPredicted RBP18.46■□□□□ 0.55
LINC01016-201ENST00000506222 GAPVD1Q14C86 1478 aa18.44■□□□□ 0.54
LINC01016-201ENST00000506222 PRXQ9BXM0 1461 aa18.42■□□□□ 0.54
LINC01016-201ENST00000506222 ABCA10Q8WWZ4 1543 aa18.38■□□□□ 0.53
LINC01016-201ENST00000506222 PRDM2Q13029 1718 aa18.38■□□□□ 0.53
LINC01016-201ENST00000506222 TRIM26Q12899 539 aaPredicted RBP18.36■□□□□ 0.53
LINC01016-201ENST00000506222 ITGAEP38570 1179 aa18.32■□□□□ 0.52
LINC01016-201ENST00000506222 KANK4Q5T7N3 995 aaPredicted RBP18.32■□□□□ 0.52
LINC01016-201ENST00000506222 HNRNPUL2Q1KMD3 747 aaKnown RBP18.31■□□□□ 0.52
LINC01016-201ENST00000506222 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.28■□□□□ 0.52
LINC01016-201ENST00000506222 FHOD3Q2V2M9 1422 aa18.26■□□□□ 0.51
LINC01016-201ENST00000506222 KIF21BO75037 1637 aa18.25■□□□□ 0.51
LINC01016-201ENST00000506222 ARAP1Q96P48 1450 aa18.24■□□□□ 0.51
LINC01016-201ENST00000506222 SNAPC4Q5SXM2 1469 aa18.23■□□□□ 0.51
LINC01016-201ENST00000506222 IFT140Q96RY7 1462 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms