RNA–Protein interactions for RNA: ENST00000505690.1

SPOCK1-204, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

TSL 2

Gene SPOCK1, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-204ENST00000505690 NISCHQ9Y2I1 1504 aa55■■■■■ 6.4
SPOCK1-204ENST00000505690 CCDC180Q9P1Z9 1646 aa48.74■■■■■ 5.39
SPOCK1-204ENST00000505690 ABCC9O60706 1549 aa47.33■■■■■ 5.17
SPOCK1-204ENST00000505690 ZCCHC6Q5VYS8 1495 aaKnown RBP45.91■■■■■ 4.94
SPOCK1-204ENST00000505690 DCAF8L2P0C7V8 631 aa45.8■■■■■ 4.92
SPOCK1-204ENST00000505690 NACADO15069 1562 aa45.73■■■■■ 4.91
SPOCK1-204ENST00000505690 RB1CC1Q8TDY2 1594 aa45.69■■■■■ 4.9
SPOCK1-204ENST00000505690 MYO15BQ96JP2 1530 aa45.57■■■■■ 4.89
SPOCK1-204ENST00000505690 DCAF1Q9Y4B6 1507 aa45.53■■■■■ 4.88
SPOCK1-204ENST00000505690 UNC13AQ9UPW8 1703 aa44.66■■■■■ 4.74
SPOCK1-204ENST00000505690 SCRIBQ14160 1630 aa44.51■■■■■ 4.72
SPOCK1-204ENST00000505690 BICRAQ9NZM4 1560 aa44.29■■■■■ 4.68
SPOCK1-204ENST00000505690 PABPN1Q86U42 306 aaKnown RBP eCLIP44.28■■■■■ 4.68
SPOCK1-204ENST00000505690 SHROOM4Q9ULL8 1493 aa43.86■■■■■ 4.61
SPOCK1-204ENST00000505690 EIF4G1Q04637 1599 aaKnown RBP43.09■■■■■ 4.49
SPOCK1-204ENST00000505690 DNAJC5BQ9UF47 199 aa43.07■■■■■ 4.49
SPOCK1-204ENST00000505690 CC2D2AQ9P2K1 1620 aa42.82■■■■■ 4.45
SPOCK1-204ENST00000505690 CECR2Q9BXF3 1484 aa42.81■■■■■ 4.44
SPOCK1-204ENST00000505690 BAZ1AQ9NRL2 1556 aaPredicted RBP42.61■■■■■ 4.41
SPOCK1-204ENST00000505690 SMARCA4P51532 1647 aa42.6■■■■■ 4.41
SPOCK1-204ENST00000505690 MROH2BQ7Z745 1585 aa42.4■■■■■ 4.38
SPOCK1-204ENST00000505690 ATAD2BQ9ULI0 1458 aa42.28■■■■■ 4.36
SPOCK1-204ENST00000505690 SMARCA2P51531 1590 aa42.24■■■■■ 4.35
SPOCK1-204ENST00000505690 NCAPD3P42695 1498 aa42.18■■■■■ 4.34
SPOCK1-204ENST00000505690 PEG3Q9GZU2 1588 aa42.18■■■■■ 4.34
SPOCK1-204ENST00000505690 RSF1Q96T23 1441 aaPredicted RBP42.05■■■■■ 4.32
SPOCK1-204ENST00000505690 HMGXB3Q12766 1538 aa42.02■■■■■ 4.32
SPOCK1-204ENST00000505690 WIZO95785 1651 aa41.97■■■■■ 4.31
SPOCK1-204ENST00000505690 BAZ1BQ9UIG0 1483 aaKnown RBP41.95■■■■■ 4.31
SPOCK1-204ENST00000505690 TOP2AP11388 1531 aaKnown RBP41.55■■■■■ 4.24
SPOCK1-204ENST00000505690 SUPT5HO00267 1087 aaKnown RBP41.28■■■■■ 4.2
SPOCK1-204ENST00000505690 NESP48681 1621 aa41.06■■■■■ 4.16
SPOCK1-204ENST00000505690 CCDC88BA6NC98 1476 aa41.05■■■■■ 4.16
SPOCK1-204ENST00000505690 LAMC3Q9Y6N6 1575 aa41.02■■■■■ 4.16
SPOCK1-204ENST00000505690 CADPSQ9ULU8 1353 aa40.98■■■■■ 4.15
SPOCK1-204ENST00000505690 CFTRP13569 1480 aa40.82■■■■■ 4.12
SPOCK1-204ENST00000505690 ERCC6Q03468 1493 aa40.77■■■■■ 4.12
SPOCK1-204ENST00000505690 PDS5BQ9NTI5 1447 aa40.73■■■■■ 4.11
SPOCK1-204ENST00000505690 KIF21AQ7Z4S6 1674 aa40.59■■■■■ 4.09
SPOCK1-204ENST00000505690 PRDM2Q13029 1718 aa40.56■■■■■ 4.08
SPOCK1-204ENST00000505690 FANCD2Q9BXW9 1451 aa40.51■■■■■ 4.08
SPOCK1-204ENST00000505690 CEP164Q9UPV0 1460 aa40.44■■■■■ 4.06
SPOCK1-204ENST00000505690 THOC2Q8NI27 1593 aaKnown RBP40.37■■■■■ 4.05
SPOCK1-204ENST00000505690 MRC2Q9UBG0 1479 aa40.3■■■■■ 4.04
SPOCK1-204ENST00000505690 CUX2O14529 1486 aa40.19■■■■■ 4.02
SPOCK1-204ENST00000505690 WDR62O43379 1518 aa40.15■■■■■ 4.02
SPOCK1-204ENST00000505690 URB2Q14146 1524 aaKnown RBP40.09■■■■■ 4.01
SPOCK1-204ENST00000505690 ABCC8Q09428 1581 aa39.93■■■■□ 3.98
SPOCK1-204ENST00000505690 TOPBP1Q92547 1522 aa39.92■■■■□ 3.98
SPOCK1-204ENST00000505690 DNMBPQ6XZF7 1577 aa39.91■■■■□ 3.98
SPOCK1-204ENST00000505690 CUX1P39880 1505 aa39.75■■■■□ 3.95
SPOCK1-204ENST00000505690 WRNQ14191 1432 aaPredicted RBP eCLIP39.65■■■■□ 3.94
SPOCK1-204ENST00000505690 POLA1P09884 1462 aaPredicted RBP39.6■■■■□ 3.93
SPOCK1-204ENST00000505690 IFT140Q96RY7 1462 aa39.57■■■■□ 3.93
SPOCK1-204ENST00000505690 FGD5Q6ZNL6 1462 aa39.56■■■■□ 3.92
SPOCK1-204ENST00000505690 SYNJ1O43426 1573 aa39.53■■■■□ 3.92
SPOCK1-204ENST00000505690 TOP2BQ02880 1626 aa39.52■■■■□ 3.92
SPOCK1-204ENST00000505690 BIVM-ERCC5R4GMW8 1640 aa39.51■■■■□ 3.92
SPOCK1-204ENST00000505690 TARBP1Q13395 1621 aaKnown RBP39.44■■■■□ 3.9
SPOCK1-204ENST00000505690 SOGA1O94964 1423 aa39.44■■■■□ 3.9
SPOCK1-204ENST00000505690 RAD54L2Q9Y4B4 1467 aa39.43■■■■□ 3.9
SPOCK1-204ENST00000505690 ZNF608Q9ULD9 1512 aaPredicted RBP39.35■■■■□ 3.89
SPOCK1-204ENST00000505690 EIF4G3O43432 1585 aaKnown RBP39.23■■■■□ 3.87
SPOCK1-204ENST00000505690 WDR97A6NE52 1622 aa39.22■■■■□ 3.87
SPOCK1-204ENST00000505690 ABCA10Q8WWZ4 1543 aa39.19■■■■□ 3.86
SPOCK1-204ENST00000505690 AQRO60306 1485 aaKnown RBP eCLIP39.17■■■■□ 3.86
SPOCK1-204ENST00000505690 TDRD9Q8NDG6 1382 aaKnown RBP39.17■■■■□ 3.86
SPOCK1-204ENST00000505690 ABCA5Q8WWZ7 1642 aa39.02■■■■□ 3.84
SPOCK1-204ENST00000505690 GAPVD1Q14C86 1478 aa38.99■■■■□ 3.83
SPOCK1-204ENST00000505690 TRIM41Q8WV44 630 aa38.97■■■■□ 3.83
SPOCK1-204ENST00000505690 GRIN2BQ13224 1484 aa38.94■■■■□ 3.82
SPOCK1-204ENST00000505690 PBRM1Q86U86 1689 aa38.9■■■■□ 3.82
SPOCK1-204ENST00000505690 SNAPC4Q5SXM2 1469 aa38.84■■■■□ 3.81
SPOCK1-204ENST00000505690 MAGI1Q96QZ7 1491 aaPredicted RBP38.79■■■■□ 3.8
SPOCK1-204ENST00000505690 KIF27Q86VH2 1401 aa38.79■■■■□ 3.8
SPOCK1-204ENST00000505690 CHIC1Q5VXU3 224 aa38.74■■■■□ 3.79
SPOCK1-204ENST00000505690 ERICH3Q5RHP9 1530 aa38.73■■■■□ 3.79
SPOCK1-204ENST00000505690 CHD1O14646 1710 aa38.66■■■■□ 3.78
SPOCK1-204ENST00000505690 SYNJ2O15056 1496 aa38.65■■■■□ 3.78
SPOCK1-204ENST00000505690 FBLN2P98095 1184 aa38.63■■■■□ 3.77
SPOCK1-204ENST00000505690 ADAMTS12P58397 1594 aa38.61■■■■□ 3.77
SPOCK1-204ENST00000505690 CHMP7Q8WUX9 453 aaPredicted RBP38.59■■■■□ 3.77
SPOCK1-204ENST00000505690 OSCARQ8IYS5 282 aa38.58■■■■□ 3.77
SPOCK1-204ENST00000505690 IGF1RP08069 1367 aa38.57■■■■□ 3.76
SPOCK1-204ENST00000505690 FHAD1B1AJZ9 1412 aa38.56■■■■□ 3.76
SPOCK1-204ENST00000505690 RUSC2Q8N2Y8 1516 aa38.55■■■■□ 3.76
SPOCK1-204ENST00000505690 DNAJC5Q9H3Z4 198 aa38.49■■■■□ 3.75
SPOCK1-204ENST00000505690 CUL7Q14999 1698 aa38.47■■■■□ 3.75
SPOCK1-204ENST00000505690 GRIN2AQ12879 1464 aa38.44■■■■□ 3.74
SPOCK1-204ENST00000505690 CARMIL1Q5VZK9 1371 aa38.36■■■■□ 3.73
SPOCK1-204ENST00000505690 EEA1Q15075 1411 aa38.3■■■■□ 3.72
SPOCK1-204ENST00000505690 NUP160Q12769 1436 aa38.25■■■■□ 3.71
SPOCK1-204ENST00000505690 CLASP1Q7Z460 1538 aa38.24■■■■□ 3.71
SPOCK1-204ENST00000505690 CEP170Q5SW79 1584 aa38.23■■■■□ 3.71
SPOCK1-204ENST00000505690 CSRNP3Q8WYN3 585 aa38.19■■■■□ 3.7
SPOCK1-204ENST00000505690 RAPGEF2Q9Y4G8 1499 aa38.18■■■■□ 3.7
SPOCK1-204ENST00000505690 FAM9AQ8IZU1 332 aaPredicted RBP38.15■■■■□ 3.7
SPOCK1-204ENST00000505690 PRXQ9BXM0 1461 aa38.14■■■■□ 3.7
SPOCK1-204ENST00000505690 KIAA0586Q9BVV6 1533 aa37.98■■■■□ 3.67
SPOCK1-204ENST00000505690 ARHGEF11O15085 1522 aa37.97■■■■□ 3.67
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms