RNA–Protein interactions for RNA: ENST00000505552.1

ITGA3-205, Transcript of integrin subunit alpha 3, humanhuman

TSL 2

Gene ITGA3, Length 600 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-205ENST00000505552 NISCHQ9Y2I1 1504 aa13.32□□□□□ -0.28
ITGA3-205ENST00000505552 AEBP2Q6ZN18 517 aaPredicted RBP12.35□□□□□ -0.43
ITGA3-205ENST00000505552 CHIC1Q5VXU3 224 aa11.7□□□□□ -0.54
ITGA3-205ENST00000505552 CCDC180Q9P1Z9 1646 aa11.67□□□□□ -0.54
ITGA3-205ENST00000505552 ZCCHC6Q5VYS8 1495 aaKnown RBP11.19□□□□□ -0.62
ITGA3-205ENST00000505552 DCAF1Q9Y4B6 1507 aa11.05□□□□□ -0.64
ITGA3-205ENST00000505552 ABCC9O60706 1549 aa11.03□□□□□ -0.64
ITGA3-205ENST00000505552 MYO15BQ96JP2 1530 aa10.96□□□□□ -0.65
ITGA3-205ENST00000505552 NACADO15069 1562 aa10.86□□□□□ -0.67
ITGA3-205ENST00000505552 DCAF8L2P0C7V8 631 aa10.79□□□□□ -0.68
ITGA3-205ENST00000505552 RB1CC1Q8TDY2 1594 aa10.75□□□□□ -0.69
ITGA3-205ENST00000505552 SHROOM4Q9ULL8 1493 aa10.67□□□□□ -0.7
ITGA3-205ENST00000505552 SCRIBQ14160 1630 aa10.66□□□□□ -0.7
ITGA3-205ENST00000505552 UNC13AQ9UPW8 1703 aa10.64□□□□□ -0.71
ITGA3-205ENST00000505552 BICRAQ9NZM4 1560 aa10.55□□□□□ -0.72
ITGA3-205ENST00000505552 PHF23Q9BUL5 403 aaPredicted RBP10.38□□□□□ -0.75
ITGA3-205ENST00000505552 CECR2Q9BXF3 1484 aa10.37□□□□□ -0.75
ITGA3-205ENST00000505552 PABPN1Q86U42 306 aaKnown RBP eCLIP10.36□□□□□ -0.75
ITGA3-205ENST00000505552 RSF1Q96T23 1441 aaPredicted RBP10.3□□□□□ -0.76
ITGA3-205ENST00000505552 MROH2BQ7Z745 1585 aa10.3□□□□□ -0.76
ITGA3-205ENST00000505552 SENP3Q9H4L4 574 aaPredicted RBP10.28□□□□□ -0.76
ITGA3-205ENST00000505552 BAZ1AQ9NRL2 1556 aaPredicted RBP10.26□□□□□ -0.77
ITGA3-205ENST00000505552 SMARCA4P51532 1647 aa10.25□□□□□ -0.77
ITGA3-205ENST00000505552 WIZO95785 1651 aa10.19□□□□□ -0.78
ITGA3-205ENST00000505552 PEG3Q9GZU2 1588 aa10.19□□□□□ -0.78
ITGA3-205ENST00000505552 SUPT5HO00267 1087 aaKnown RBP10.18□□□□□ -0.78
ITGA3-205ENST00000505552 EIF4G1Q04637 1599 aaKnown RBP10.16□□□□□ -0.78
ITGA3-205ENST00000505552 DNAJC5Q9H3Z4 198 aa10.13□□□□□ -0.79
ITGA3-205ENST00000505552 ATAD2BQ9ULI0 1458 aa10.11□□□□□ -0.79
ITGA3-205ENST00000505552 TOP2AP11388 1531 aaKnown RBP10.07□□□□□ -0.8
ITGA3-205ENST00000505552 SMARCA2P51531 1590 aa10.05□□□□□ -0.8
ITGA3-205ENST00000505552 NCAPD3P42695 1498 aa10.04□□□□□ -0.8
ITGA3-205ENST00000505552 CC2D2AQ9P2K1 1620 aa10.03□□□□□ -0.8
ITGA3-205ENST00000505552 HMGXB3Q12766 1538 aa10.02□□□□□ -0.8
ITGA3-205ENST00000505552 CCDC88BA6NC98 1476 aa9.98□□□□□ -0.81
ITGA3-205ENST00000505552 BAZ1BQ9UIG0 1483 aaKnown RBP9.98□□□□□ -0.81
ITGA3-205ENST00000505552 DNAJC5BQ9UF47 199 aa9.9□□□□□ -0.82
ITGA3-205ENST00000505552 CFTRP13569 1480 aa9.79□□□□□ -0.84
ITGA3-205ENST00000505552 PRDM2Q13029 1718 aa9.74□□□□□ -0.85
ITGA3-205ENST00000505552 CADPSQ9ULU8 1353 aa9.74□□□□□ -0.85
ITGA3-205ENST00000505552 ABCC8Q09428 1581 aa9.71□□□□□ -0.85
ITGA3-205ENST00000505552 FOXD1Q16676 465 aa9.71□□□□□ -0.86
ITGA3-205ENST00000505552 NESP48681 1621 aa9.71□□□□□ -0.86
ITGA3-205ENST00000505552 LAMC3Q9Y6N6 1575 aa9.68□□□□□ -0.86
ITGA3-205ENST00000505552 SYNJ1O43426 1573 aa9.67□□□□□ -0.86
ITGA3-205ENST00000505552 WRNQ14191 1432 aaPredicted RBP eCLIP9.64□□□□□ -0.87
ITGA3-205ENST00000505552 BIVM-ERCC5R4GMW8 1640 aa9.64□□□□□ -0.87
ITGA3-205ENST00000505552 CUX1P39880 1505 aa9.63□□□□□ -0.87
ITGA3-205ENST00000505552 FANCD2Q9BXW9 1451 aa9.62□□□□□ -0.87
ITGA3-205ENST00000505552 TOP2BQ02880 1626 aa9.62□□□□□ -0.87
ITGA3-205ENST00000505552 KIF21AQ7Z4S6 1674 aa9.59□□□□□ -0.87
ITGA3-205ENST00000505552 TRIM41Q8WV44 630 aa9.57□□□□□ -0.88
ITGA3-205ENST00000505552 URB2Q14146 1524 aaKnown RBP9.56□□□□□ -0.88
ITGA3-205ENST00000505552 PDS5BQ9NTI5 1447 aa9.55□□□□□ -0.88
ITGA3-205ENST00000505552 DNMBPQ6XZF7 1577 aa9.54□□□□□ -0.88
ITGA3-205ENST00000505552 TOPBP1Q92547 1522 aa9.54□□□□□ -0.88
ITGA3-205ENST00000505552 CEP164Q9UPV0 1460 aa9.53□□□□□ -0.88
ITGA3-205ENST00000505552 RUSC2Q8N2Y8 1516 aa9.52□□□□□ -0.88
ITGA3-205ENST00000505552 SOGA1O94964 1423 aa9.52□□□□□ -0.89
ITGA3-205ENST00000505552 FGD5Q6ZNL6 1462 aa9.5□□□□□ -0.89
ITGA3-205ENST00000505552 THOC2Q8NI27 1593 aaKnown RBP9.5□□□□□ -0.89
ITGA3-205ENST00000505552 POLA1P09884 1462 aaPredicted RBP9.48□□□□□ -0.89
ITGA3-205ENST00000505552 WDR62O43379 1518 aa9.48□□□□□ -0.89
ITGA3-205ENST00000505552 MRC2Q9UBG0 1479 aa9.47□□□□□ -0.89
ITGA3-205ENST00000505552 WDR97A6NE52 1622 aa9.47□□□□□ -0.89
ITGA3-205ENST00000505552 CUX2O14529 1486 aa9.46□□□□□ -0.9
ITGA3-205ENST00000505552 TARBP1Q13395 1621 aaKnown RBP9.45□□□□□ -0.9
ITGA3-205ENST00000505552 RAD54L2Q9Y4B4 1467 aa9.44□□□□□ -0.9
ITGA3-205ENST00000505552 ABCA10Q8WWZ4 1543 aa9.44□□□□□ -0.9
ITGA3-205ENST00000505552 EEA1Q15075 1411 aa9.43□□□□□ -0.9
ITGA3-205ENST00000505552 ABCA5Q8WWZ7 1642 aa9.4□□□□□ -0.9
ITGA3-205ENST00000505552 LOC105371045A0A1W2PR82 267 aa9.39□□□□□ -0.91
ITGA3-205ENST00000505552 FAM9AQ8IZU1 332 aaPredicted RBP9.38□□□□□ -0.91
ITGA3-205ENST00000505552 ERCC6Q03468 1493 aa9.38□□□□□ -0.91
ITGA3-205ENST00000505552 PRXQ9BXM0 1461 aa9.38□□□□□ -0.91
ITGA3-205ENST00000505552 KIF21BO75037 1637 aa9.38□□□□□ -0.91
ITGA3-205ENST00000505552 CSRNP3Q8WYN3 585 aa9.37□□□□□ -0.91
ITGA3-205ENST00000505552 KIF27Q86VH2 1401 aa9.37□□□□□ -0.91
ITGA3-205ENST00000505552 IGF1RP08069 1367 aa9.37□□□□□ -0.91
ITGA3-205ENST00000505552 IFT140Q96RY7 1462 aa9.34□□□□□ -0.91
ITGA3-205ENST00000505552 ZNF608Q9ULD9 1512 aaPredicted RBP9.34□□□□□ -0.91
ITGA3-205ENST00000505552 RAPGEF2Q9Y4G8 1499 aa9.33□□□□□ -0.92
ITGA3-205ENST00000505552 ERICH3Q5RHP9 1530 aa9.32□□□□□ -0.92
ITGA3-205ENST00000505552 TDRD9Q8NDG6 1382 aaKnown RBP9.32□□□□□ -0.92
ITGA3-205ENST00000505552 GAPVD1Q14C86 1478 aa9.3□□□□□ -0.92
ITGA3-205ENST00000505552 PBRM1Q86U86 1689 aa9.29□□□□□ -0.92
ITGA3-205ENST00000505552 AQRO60306 1485 aaKnown RBP eCLIP9.29□□□□□ -0.92
ITGA3-205ENST00000505552 GOLGA3Q08378 1498 aa9.29□□□□□ -0.92
ITGA3-205ENST00000505552 EIF4G3O43432 1585 aaKnown RBP9.29□□□□□ -0.92
ITGA3-205ENST00000505552 TNIKQ9UKE5 1360 aa9.28□□□□□ -0.92
ITGA3-205ENST00000505552 CUL7Q14999 1698 aa9.27□□□□□ -0.93
ITGA3-205ENST00000505552 CARMIL1Q5VZK9 1371 aa9.26□□□□□ -0.93
ITGA3-205ENST00000505552 PLPPR3Q6T4P5 718 aa9.26□□□□□ -0.93
ITGA3-205ENST00000505552 ADAMTS12P58397 1594 aa9.25□□□□□ -0.93
ITGA3-205ENST00000505552 GRIN2BQ13224 1484 aa9.25□□□□□ -0.93
ITGA3-205ENST00000505552 PPP6R1Q9UPN7 881 aa9.22□□□□□ -0.93
ITGA3-205ENST00000505552 FHAD1B1AJZ9 1412 aa9.21□□□□□ -0.94
ITGA3-205ENST00000505552 SNAPC4Q5SXM2 1469 aa9.21□□□□□ -0.94
ITGA3-205ENST00000505552 EHMT2Q96KQ7 1210 aa9.2□□□□□ -0.94
ITGA3-205ENST00000505552 CEP162Q5TB80 1403 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms