RNA–Protein interactions for RNA: ENST00000505331.1

CPNE4-204, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-204ENST00000505331 AEBP2Q6ZN18 517 aaPredicted RBP11.94□□□□□ -0.5
CPNE4-204ENST00000505331 NISCHQ9Y2I1 1504 aa11.28□□□□□ -0.6
CPNE4-204ENST00000505331 CHIC1Q5VXU3 224 aa11.18□□□□□ -0.62
CPNE4-204ENST00000505331 ABCC9O60706 1549 aa11.09□□□□□ -0.63
CPNE4-204ENST00000505331 DNAJC5BQ9UF47 199 aa11.06□□□□□ -0.64
CPNE4-204ENST00000505331 DNAJC5Q9H3Z4 198 aa10.72□□□□□ -0.69
CPNE4-204ENST00000505331 CCDC180Q9P1Z9 1646 aa10.34□□□□□ -0.75
CPNE4-204ENST00000505331 PABPN1Q86U42 306 aaKnown RBP eCLIP10.26□□□□□ -0.77
CPNE4-204ENST00000505331 RB1CC1Q8TDY2 1594 aa10.24□□□□□ -0.77
CPNE4-204ENST00000505331 SENP3Q9H4L4 574 aaPredicted RBP10.18□□□□□ -0.78
CPNE4-204ENST00000505331 CECR2Q9BXF3 1484 aa10.1□□□□□ -0.79
CPNE4-204ENST00000505331 PHF23Q9BUL5 403 aaPredicted RBP10.05□□□□□ -0.8
CPNE4-204ENST00000505331 NACADO15069 1562 aa10.02□□□□□ -0.81
CPNE4-204ENST00000505331 CC2D2AQ9P2K1 1620 aa9.94□□□□□ -0.82
CPNE4-204ENST00000505331 BICRAQ9NZM4 1560 aa9.93□□□□□ -0.82
CPNE4-204ENST00000505331 TRIM41Q8WV44 630 aa9.92□□□□□ -0.82
CPNE4-204ENST00000505331 CUX2O14529 1486 aa9.89□□□□□ -0.83
CPNE4-204ENST00000505331 DCAF8L2P0C7V8 631 aa9.86□□□□□ -0.83
CPNE4-204ENST00000505331 SHROOM4Q9ULL8 1493 aa9.83□□□□□ -0.84
CPNE4-204ENST00000505331 UNC13AQ9UPW8 1703 aa9.81□□□□□ -0.84
CPNE4-204ENST00000505331 EIF4G1Q04637 1599 aaKnown RBP9.78□□□□□ -0.84
CPNE4-204ENST00000505331 MYO15BQ96JP2 1530 aa9.7□□□□□ -0.86
CPNE4-204ENST00000505331 ERCC6Q03468 1493 aa9.66□□□□□ -0.86
CPNE4-204ENST00000505331 FOXD1Q16676 465 aa9.52□□□□□ -0.89
CPNE4-204ENST00000505331 SCRIBQ14160 1630 aa9.45□□□□□ -0.9
CPNE4-204ENST00000505331 OSCARQ8IYS5 282 aa9.36□□□□□ -0.91
CPNE4-204ENST00000505331 THOC2Q8NI27 1593 aaKnown RBP9.32□□□□□ -0.92
CPNE4-204ENST00000505331 NCAPD3P42695 1498 aa9.31□□□□□ -0.92
CPNE4-204ENST00000505331 NESP48681 1621 aa9.31□□□□□ -0.92
CPNE4-204ENST00000505331 TRHP20396 242 aaPredicted RBP9.3□□□□□ -0.92
CPNE4-204ENST00000505331 DCAF1Q9Y4B6 1507 aa9.3□□□□□ -0.92
CPNE4-204ENST00000505331 ILDR1Q86SU0 546 aaPredicted RBP9.28□□□□□ -0.92
CPNE4-204ENST00000505331 BAZ1AQ9NRL2 1556 aaPredicted RBP9.22□□□□□ -0.93
CPNE4-204ENST00000505331 SMARCA2P51531 1590 aa9.21□□□□□ -0.93
CPNE4-204ENST00000505331 PDS5BQ9NTI5 1447 aa9.19□□□□□ -0.94
CPNE4-204ENST00000505331 ZCCHC6Q5VYS8 1495 aaKnown RBP9.19□□□□□ -0.94
CPNE4-204ENST00000505331 RIMBP3CA6NJZ7 1639 aa9.19□□□□□ -0.94
CPNE4-204ENST00000505331 RIMBP3BA6NNM3 1639 aa9.19□□□□□ -0.94
CPNE4-204ENST00000505331 RIMBP3Q9UFD9 1639 aa9.19□□□□□ -0.94
CPNE4-204ENST00000505331 CYB5RLQ6IPT4 315 aa9.17□□□□□ -0.94
CPNE4-204ENST00000505331 ATAD2BQ9ULI0 1458 aa9.15□□□□□ -0.94
CPNE4-204ENST00000505331 LAMC3Q9Y6N6 1575 aa9.15□□□□□ -0.95
CPNE4-204ENST00000505331 ARHGEF11O15085 1522 aa9.14□□□□□ -0.95
CPNE4-204ENST00000505331 HMGXB3Q12766 1538 aa9.12□□□□□ -0.95
CPNE4-204ENST00000505331 MRC2Q9UBG0 1479 aa9.11□□□□□ -0.95
CPNE4-204ENST00000505331 WDR62O43379 1518 aa9.09□□□□□ -0.95
CPNE4-204ENST00000505331 KIF21AQ7Z4S6 1674 aa9.06□□□□□ -0.96
CPNE4-204ENST00000505331 BAZ1BQ9UIG0 1483 aaKnown RBP9.02□□□□□ -0.97
CPNE4-204ENST00000505331 POTEDQ86YR6 584 aa9□□□□□ -0.97
CPNE4-204ENST00000505331 ARAP1Q96P48 1450 aa9□□□□□ -0.97
CPNE4-204ENST00000505331 CADPSQ9ULU8 1353 aa8.99□□□□□ -0.97
CPNE4-204ENST00000505331 MSH5O43196 834 aa8.95□□□□□ -0.98
CPNE4-204ENST00000505331 CEP164Q9UPV0 1460 aa8.93□□□□□ -0.98
CPNE4-204ENST00000505331 RSF1Q96T23 1441 aaPredicted RBP8.91□□□□□ -0.98
CPNE4-204ENST00000505331 SMARCA4P51532 1647 aa8.89□□□□□ -0.99
CPNE4-204ENST00000505331 FANCD2Q9BXW9 1451 aa8.86□□□□□ -0.99
CPNE4-204ENST00000505331 PLPPR3Q6T4P5 718 aa8.85□□□□□ -0.99
CPNE4-204ENST00000505331 PEG3Q9GZU2 1588 aa8.85□□□□□ -0.99
CPNE4-204ENST00000505331 PIAS4Q8N2W9 510 aaPredicted RBP8.84□□□□□ -0.99
CPNE4-204ENST00000505331 KDM4FA0A1W2PPD8 638 aa8.83□□□□□ -1
CPNE4-204ENST00000505331 ZNF608Q9ULD9 1512 aaPredicted RBP8.81□□□□□ -1
CPNE4-204ENST00000505331 FBXO41Q8TF61 875 aa8.81□□□□□ -1
CPNE4-204ENST00000505331 PPP6R1Q9UPN7 881 aa8.81□□□□□ -1
CPNE4-204ENST00000505331 URB2Q14146 1524 aaKnown RBP8.8□□□□□ -1
CPNE4-204ENST00000505331 IFT140Q96RY7 1462 aa8.8□□□□□ -1
CPNE4-204ENST00000505331 FBLN2P98095 1184 aa8.78□□□□□ -1
CPNE4-204ENST00000505331 ADRA2BP18089 450 aa8.76□□□□□ -1.01
CPNE4-204ENST00000505331 LMTK3Q96Q04 1460 aa8.76□□□□□ -1.01
CPNE4-204ENST00000505331 SOCS7O14512 581 aa8.75□□□□□ -1.01
CPNE4-204ENST00000505331 CFTRP13569 1480 aa8.73□□□□□ -1.01
CPNE4-204ENST00000505331 ERCC6L2Q5T890 1561 aa8.71□□□□□ -1.02
CPNE4-204ENST00000505331 GAPVD1Q14C86 1478 aa8.68□□□□□ -1.02
CPNE4-204ENST00000505331 EIF4G3O43432 1585 aaKnown RBP8.68□□□□□ -1.02
CPNE4-204ENST00000505331 AQRO60306 1485 aaKnown RBP eCLIP8.67□□□□□ -1.02
CPNE4-204ENST00000505331 CLASP1Q7Z460 1538 aa8.67□□□□□ -1.02
CPNE4-204ENST00000505331 CHD1O14646 1710 aa8.66□□□□□ -1.02
CPNE4-204ENST00000505331 MROH2BQ7Z745 1585 aa8.65□□□□□ -1.02
CPNE4-204ENST00000505331 ILDR2Q71H61 639 aa8.63□□□□□ -1.03
CPNE4-204ENST00000505331 HECW2Q9P2P5 1572 aa8.63□□□□□ -1.03
CPNE4-204ENST00000505331 CHMP7Q8WUX9 453 aaPredicted RBP8.62□□□□□ -1.03
CPNE4-204ENST00000505331 SYNJ1O43426 1573 aa8.61□□□□□ -1.03
CPNE4-204ENST00000505331 TOPBP1Q92547 1522 aa8.59□□□□□ -1.03
CPNE4-204ENST00000505331 SYNJ2O15056 1496 aa8.58□□□□□ -1.04
CPNE4-204ENST00000505331 ABCC8Q09428 1581 aa8.57□□□□□ -1.04
CPNE4-204ENST00000505331 FAM69CQ0P6D2 419 aa8.57□□□□□ -1.04
CPNE4-204ENST00000505331 DISP3Q9P2K9 1392 aa8.57□□□□□ -1.04
CPNE4-204ENST00000505331 ADGRL1O94910 1474 aa8.55□□□□□ -1.04
CPNE4-204ENST00000505331 SNAPC4Q5SXM2 1469 aa8.55□□□□□ -1.04
CPNE4-204ENST00000505331 ABCC10Q5T3U5 1492 aa8.53□□□□□ -1.04
CPNE4-204ENST00000505331 KDM6BO15054 1643 aa8.53□□□□□ -1.04
CPNE4-204ENST00000505331 TARBP1Q13395 1621 aaKnown RBP8.53□□□□□ -1.04
CPNE4-204ENST00000505331 MAGI1Q96QZ7 1491 aaPredicted RBP8.51□□□□□ -1.05
CPNE4-204ENST00000505331 TDRD9Q8NDG6 1382 aaKnown RBP8.51□□□□□ -1.05
CPNE4-204ENST00000505331 KIF13AQ9H1H9 1805 aa8.49□□□□□ -1.05
CPNE4-204ENST00000505331 DNMBPQ6XZF7 1577 aa8.48□□□□□ -1.05
CPNE4-204ENST00000505331 POLA1P09884 1462 aaPredicted RBP8.46□□□□□ -1.05
CPNE4-204ENST00000505331 NPM1P06748 294 aaKnown RBP eCLIP8.46□□□□□ -1.06
CPNE4-204ENST00000505331 GRIN2BQ13224 1484 aa8.45□□□□□ -1.06
CPNE4-204ENST00000505331 WIZO95785 1651 aa8.45□□□□□ -1.06
CPNE4-204ENST00000505331 SOGA1O94964 1423 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms