RNA–Protein interactions for RNA: ENST00000505073.5

CCSER1-205, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-205ENST00000505073 NISCHQ9Y2I1 1504 aa29.28■■■□□ 2.28
CCSER1-205ENST00000505073 CCDC180Q9P1Z9 1646 aa25.37■■□□□ 1.65
CCSER1-205ENST00000505073 ZCCHC6Q5VYS8 1495 aaKnown RBP24.61■■□□□ 1.53
CCSER1-205ENST00000505073 DCAF8L2P0C7V8 631 aa24.35■■□□□ 1.49
CCSER1-205ENST00000505073 SHROOM4Q9ULL8 1493 aa24.19■■□□□ 1.46
CCSER1-205ENST00000505073 DCAF1Q9Y4B6 1507 aa24.11■■□□□ 1.45
CCSER1-205ENST00000505073 ABCC9O60706 1549 aa24.07■■□□□ 1.44
CCSER1-205ENST00000505073 MYO15BQ96JP2 1530 aa23.74■■□□□ 1.39
CCSER1-205ENST00000505073 NACADO15069 1562 aa23.63■■□□□ 1.37
CCSER1-205ENST00000505073 SCRIBQ14160 1630 aa23.52■■□□□ 1.36
CCSER1-205ENST00000505073 RB1CC1Q8TDY2 1594 aa23.41■■□□□ 1.34
CCSER1-205ENST00000505073 SUPT5HO00267 1087 aaKnown RBP23.33■■□□□ 1.32
CCSER1-205ENST00000505073 UNC13AQ9UPW8 1703 aa23■■□□□ 1.27
CCSER1-205ENST00000505073 CECR2Q9BXF3 1484 aa22.83■■□□□ 1.25
CCSER1-205ENST00000505073 RSF1Q96T23 1441 aaPredicted RBP22.81■■□□□ 1.24
CCSER1-205ENST00000505073 PABPN1Q86U42 306 aaKnown RBP eCLIP22.79■■□□□ 1.24
CCSER1-205ENST00000505073 BICRAQ9NZM4 1560 aa22.76■■□□□ 1.23
CCSER1-205ENST00000505073 MROH2BQ7Z745 1585 aa22.68■■□□□ 1.22
CCSER1-205ENST00000505073 BAZ1AQ9NRL2 1556 aaPredicted RBP22.57■■□□□ 1.2
CCSER1-205ENST00000505073 WIZO95785 1651 aa22.51■■□□□ 1.19
CCSER1-205ENST00000505073 SMARCA4P51532 1647 aa22.48■■□□□ 1.19
CCSER1-205ENST00000505073 CHIC1Q5VXU3 224 aa22.33■■□□□ 1.17
CCSER1-205ENST00000505073 TOP2AP11388 1531 aaKnown RBP22.21■■□□□ 1.15
CCSER1-205ENST00000505073 PEG3Q9GZU2 1588 aa22.13■■□□□ 1.13
CCSER1-205ENST00000505073 ATAD2BQ9ULI0 1458 aa22.1■■□□□ 1.13
CCSER1-205ENST00000505073 EIF4G1Q04637 1599 aaKnown RBP22.06■■□□□ 1.12
CCSER1-205ENST00000505073 CCDC88BA6NC98 1476 aa22.05■■□□□ 1.12
CCSER1-205ENST00000505073 SMARCA2P51531 1590 aa22.04■■□□□ 1.12
CCSER1-205ENST00000505073 BAZ1BQ9UIG0 1483 aaKnown RBP21.98■■□□□ 1.11
CCSER1-205ENST00000505073 TRIM41Q8WV44 630 aa21.84■■□□□ 1.09
CCSER1-205ENST00000505073 NCAPD3P42695 1498 aa21.84■■□□□ 1.09
CCSER1-205ENST00000505073 HMGXB3Q12766 1538 aa21.79■■□□□ 1.08
CCSER1-205ENST00000505073 CC2D2AQ9P2K1 1620 aa21.72■■□□□ 1.07
CCSER1-205ENST00000505073 ABCC8Q09428 1581 aa21.68■■□□□ 1.06
CCSER1-205ENST00000505073 LOC105371045A0A1W2PR82 267 aa21.57■■□□□ 1.04
CCSER1-205ENST00000505073 FAM9AQ8IZU1 332 aaPredicted RBP21.56■■□□□ 1.04
CCSER1-205ENST00000505073 HRCP23327 699 aa21.53■■□□□ 1.04
CCSER1-205ENST00000505073 WRNQ14191 1432 aaPredicted RBP eCLIP21.46■■□□□ 1.03
CCSER1-205ENST00000505073 CFTRP13569 1480 aa21.41■■□□□ 1.02
CCSER1-205ENST00000505073 SYNJ1O43426 1573 aa21.38■■□□□ 1.01
CCSER1-205ENST00000505073 EHMT2Q96KQ7 1210 aa21.34■■□□□ 1.01
CCSER1-205ENST00000505073 CADPSQ9ULU8 1353 aa21.33■■□□□ 1.01
CCSER1-205ENST00000505073 SOGA1O94964 1423 aa21.3■■□□□ 1
CCSER1-205ENST00000505073 DNAJC5BQ9UF47 199 aa21.3■■□□□ 1
CCSER1-205ENST00000505073 PRDM2Q13029 1718 aa21.25■□□□□ 0.99
CCSER1-205ENST00000505073 RUSC2Q8N2Y8 1516 aa21.24■□□□□ 0.99
CCSER1-205ENST00000505073 TOP2BQ02880 1626 aa21.22■□□□□ 0.99
CCSER1-205ENST00000505073 CUX1P39880 1505 aa21.19■□□□□ 0.98
CCSER1-205ENST00000505073 NESP48681 1621 aa21.19■□□□□ 0.98
CCSER1-205ENST00000505073 BIVM-ERCC5R4GMW8 1640 aa21.18■□□□□ 0.98
CCSER1-205ENST00000505073 EEA1Q15075 1411 aa21.14■□□□□ 0.97
CCSER1-205ENST00000505073 CSRNP3Q8WYN3 585 aa21.12■□□□□ 0.97
CCSER1-205ENST00000505073 PCGF6Q9BYE7 350 aa21.12■□□□□ 0.97
CCSER1-205ENST00000505073 FANCD2Q9BXW9 1451 aa21.11■□□□□ 0.97
CCSER1-205ENST00000505073 LAMC3Q9Y6N6 1575 aa21.05■□□□□ 0.96
CCSER1-205ENST00000505073 PPARGC1BQ86YN6 1023 aaKnown RBP20.96■□□□□ 0.95
CCSER1-205ENST00000505073 CEP164Q9UPV0 1460 aa20.94■□□□□ 0.94
CCSER1-205ENST00000505073 FGD5Q6ZNL6 1462 aa20.94■□□□□ 0.94
CCSER1-205ENST00000505073 PDS5BQ9NTI5 1447 aa20.92■□□□□ 0.94
CCSER1-205ENST00000505073 UBTFP17480 764 aaKnown RBP20.92■□□□□ 0.94
CCSER1-205ENST00000505073 GOLGA3Q08378 1498 aa20.92■□□□□ 0.94
CCSER1-205ENST00000505073 DNMBPQ6XZF7 1577 aa20.9■□□□□ 0.94
CCSER1-205ENST00000505073 TOPBP1Q92547 1522 aa20.89■□□□□ 0.93
CCSER1-205ENST00000505073 KIF27Q86VH2 1401 aa20.88■□□□□ 0.93
CCSER1-205ENST00000505073 KIF21BO75037 1637 aa20.88■□□□□ 0.93
CCSER1-205ENST00000505073 TNIKQ9UKE5 1360 aa20.88■□□□□ 0.93
CCSER1-205ENST00000505073 KIF21AQ7Z4S6 1674 aa20.87■□□□□ 0.93
CCSER1-205ENST00000505073 URB2Q14146 1524 aaKnown RBP20.85■□□□□ 0.93
CCSER1-205ENST00000505073 CUX2O14529 1486 aa20.84■□□□□ 0.93
CCSER1-205ENST00000505073 RAPGEF2Q9Y4G8 1499 aa20.84■□□□□ 0.93
CCSER1-205ENST00000505073 CEP162Q5TB80 1403 aa20.82■□□□□ 0.92
CCSER1-205ENST00000505073 POLA1P09884 1462 aaPredicted RBP20.81■□□□□ 0.92
CCSER1-205ENST00000505073 RAD54L2Q9Y4B4 1467 aa20.8■□□□□ 0.92
CCSER1-205ENST00000505073 PRXQ9BXM0 1461 aa20.77■□□□□ 0.92
CCSER1-205ENST00000505073 IGF1RP08069 1367 aa20.72■□□□□ 0.91
CCSER1-205ENST00000505073 ABCA10Q8WWZ4 1543 aa20.71■□□□□ 0.91
CCSER1-205ENST00000505073 ERICH3Q5RHP9 1530 aa20.7■□□□□ 0.9
CCSER1-205ENST00000505073 RANGAP1P46060 587 aaPredicted RBP20.66■□□□□ 0.9
CCSER1-205ENST00000505073 MRC2Q9UBG0 1479 aa20.65■□□□□ 0.9
CCSER1-205ENST00000505073 TRIM26Q12899 539 aaPredicted RBP20.62■□□□□ 0.89
CCSER1-205ENST00000505073 CLIP1P30622 1438 aa20.62■□□□□ 0.89
CCSER1-205ENST00000505073 CARMIL1Q5VZK9 1371 aa20.62■□□□□ 0.89
CCSER1-205ENST00000505073 WDR97A6NE52 1622 aa20.61■□□□□ 0.89
CCSER1-205ENST00000505073 TDRD9Q8NDG6 1382 aaKnown RBP20.6■□□□□ 0.89
CCSER1-205ENST00000505073 ERCC6Q03468 1493 aa20.58■□□□□ 0.89
CCSER1-205ENST00000505073 TARBP1Q13395 1621 aaKnown RBP20.54■□□□□ 0.88
CCSER1-205ENST00000505073 ABCA5Q8WWZ7 1642 aa20.52■□□□□ 0.88
CCSER1-205ENST00000505073 WDR62O43379 1518 aa20.52■□□□□ 0.88
CCSER1-205ENST00000505073 GAPVD1Q14C86 1478 aa20.51■□□□□ 0.87
CCSER1-205ENST00000505073 CUL7Q14999 1698 aa20.46■□□□□ 0.87
CCSER1-205ENST00000505073 THOC2Q8NI27 1593 aaKnown RBP20.45■□□□□ 0.86
CCSER1-205ENST00000505073 PELP1Q8IZL8 1130 aaKnown RBP20.44■□□□□ 0.86
CCSER1-205ENST00000505073 TTBK1Q5TCY1 1321 aaPredicted RBP20.44■□□□□ 0.86
CCSER1-205ENST00000505073 VPS8Q8N3P4 1428 aa20.43■□□□□ 0.86
CCSER1-205ENST00000505073 AQRO60306 1485 aaKnown RBP eCLIP20.43■□□□□ 0.86
CCSER1-205ENST00000505073 ZEB1P37275 1124 aaPredicted RBP20.42■□□□□ 0.86
CCSER1-205ENST00000505073 IFT140Q96RY7 1462 aa20.41■□□□□ 0.86
CCSER1-205ENST00000505073 ARAP1Q96P48 1450 aa20.41■□□□□ 0.86
CCSER1-205ENST00000505073 ZNF608Q9ULD9 1512 aaPredicted RBP20.39■□□□□ 0.85
CCSER1-205ENST00000505073 ARHGAP35Q9NRY4 1499 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms