RNA–Protein interactions for RNA: ENST00000503851.5

PTPN20-214, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-214ENST00000503851 NISCHQ9Y2I1 1504 aa24.96■■□□□ 1.59
PTPN20-214ENST00000503851 CCDC180Q9P1Z9 1646 aa22.09■■□□□ 1.13
PTPN20-214ENST00000503851 ABCC9O60706 1549 aa21.38■■□□□ 1.01
PTPN20-214ENST00000503851 ZCCHC6Q5VYS8 1495 aaKnown RBP20.85■□□□□ 0.93
PTPN20-214ENST00000503851 NACADO15069 1562 aa20.68■□□□□ 0.9
PTPN20-214ENST00000503851 DCAF8L2P0C7V8 631 aa20.66■□□□□ 0.9
PTPN20-214ENST00000503851 DCAF1Q9Y4B6 1507 aa20.64■□□□□ 0.9
PTPN20-214ENST00000503851 RB1CC1Q8TDY2 1594 aa20.63■□□□□ 0.89
PTPN20-214ENST00000503851 MYO15BQ96JP2 1530 aa20.63■□□□□ 0.89
PTPN20-214ENST00000503851 UNC13AQ9UPW8 1703 aa20.34■□□□□ 0.85
PTPN20-214ENST00000503851 SCRIBQ14160 1630 aa20.17■□□□□ 0.82
PTPN20-214ENST00000503851 BICRAQ9NZM4 1560 aa20.12■□□□□ 0.81
PTPN20-214ENST00000503851 PABPN1Q86U42 306 aaKnown RBP eCLIP20.02■□□□□ 0.8
PTPN20-214ENST00000503851 SHROOM4Q9ULL8 1493 aa19.84■□□□□ 0.77
PTPN20-214ENST00000503851 DNAJC5BQ9UF47 199 aa19.51■□□□□ 0.71
PTPN20-214ENST00000503851 EIF4G1Q04637 1599 aaKnown RBP19.5■□□□□ 0.71
PTPN20-214ENST00000503851 CECR2Q9BXF3 1484 aa19.48■□□□□ 0.71
PTPN20-214ENST00000503851 CC2D2AQ9P2K1 1620 aa19.37■□□□□ 0.69
PTPN20-214ENST00000503851 SMARCA4P51532 1647 aa19.33■□□□□ 0.69
PTPN20-214ENST00000503851 BAZ1AQ9NRL2 1556 aaPredicted RBP19.28■□□□□ 0.68
PTPN20-214ENST00000503851 MROH2BQ7Z745 1585 aa19.27■□□□□ 0.68
PTPN20-214ENST00000503851 ATAD2BQ9ULI0 1458 aa19.16■□□□□ 0.66
PTPN20-214ENST00000503851 PEG3Q9GZU2 1588 aa19.15■□□□□ 0.66
PTPN20-214ENST00000503851 RSF1Q96T23 1441 aaPredicted RBP19.11■□□□□ 0.65
PTPN20-214ENST00000503851 WIZO95785 1651 aa19.1■□□□□ 0.65
PTPN20-214ENST00000503851 NCAPD3P42695 1498 aa19.09■□□□□ 0.65
PTPN20-214ENST00000503851 SMARCA2P51531 1590 aa19.08■□□□□ 0.65
PTPN20-214ENST00000503851 HMGXB3Q12766 1538 aa19.01■□□□□ 0.63
PTPN20-214ENST00000503851 BAZ1BQ9UIG0 1483 aaKnown RBP18.96■□□□□ 0.63
PTPN20-214ENST00000503851 TOP2AP11388 1531 aaKnown RBP18.84■□□□□ 0.61
PTPN20-214ENST00000503851 SUPT5HO00267 1087 aaKnown RBP18.74■□□□□ 0.59
PTPN20-214ENST00000503851 AEBP2Q6ZN18 517 aaPredicted RBP18.69■□□□□ 0.58
PTPN20-214ENST00000503851 CCDC88BA6NC98 1476 aa18.65■□□□□ 0.58
PTPN20-214ENST00000503851 NESP48681 1621 aa18.62■□□□□ 0.57
PTPN20-214ENST00000503851 LAMC3Q9Y6N6 1575 aa18.53■□□□□ 0.56
PTPN20-214ENST00000503851 CADPSQ9ULU8 1353 aa18.53■□□□□ 0.56
PTPN20-214ENST00000503851 CFTRP13569 1480 aa18.49■□□□□ 0.55
PTPN20-214ENST00000503851 PRDM2Q13029 1718 aa18.43■□□□□ 0.54
PTPN20-214ENST00000503851 KIF21AQ7Z4S6 1674 aa18.43■□□□□ 0.54
PTPN20-214ENST00000503851 PDS5BQ9NTI5 1447 aa18.34■□□□□ 0.53
PTPN20-214ENST00000503851 ERCC6Q03468 1493 aa18.32■□□□□ 0.52
PTPN20-214ENST00000503851 FANCD2Q9BXW9 1451 aa18.32■□□□□ 0.52
PTPN20-214ENST00000503851 THOC2Q8NI27 1593 aaKnown RBP18.29■□□□□ 0.52
PTPN20-214ENST00000503851 CEP164Q9UPV0 1460 aa18.24■□□□□ 0.51
PTPN20-214ENST00000503851 MRC2Q9UBG0 1479 aa18.19■□□□□ 0.5
PTPN20-214ENST00000503851 URB2Q14146 1524 aaKnown RBP18.18■□□□□ 0.5
PTPN20-214ENST00000503851 WDR62O43379 1518 aa18.16■□□□□ 0.5
PTPN20-214ENST00000503851 TOPBP1Q92547 1522 aa18.08■□□□□ 0.49
PTPN20-214ENST00000503851 CUX2O14529 1486 aa18.07■□□□□ 0.48
PTPN20-214ENST00000503851 ABCC8Q09428 1581 aa18.06■□□□□ 0.48
PTPN20-214ENST00000503851 DNMBPQ6XZF7 1577 aa18.06■□□□□ 0.48
PTPN20-214ENST00000503851 CUX1P39880 1505 aa18.06■□□□□ 0.48
PTPN20-214ENST00000503851 SYNJ1O43426 1573 aa17.99■□□□□ 0.47
PTPN20-214ENST00000503851 WRNQ14191 1432 aaPredicted RBP eCLIP17.97■□□□□ 0.47
PTPN20-214ENST00000503851 BIVM-ERCC5R4GMW8 1640 aa17.96■□□□□ 0.47
PTPN20-214ENST00000503851 POLA1P09884 1462 aaPredicted RBP17.95■□□□□ 0.46
PTPN20-214ENST00000503851 TOP2BQ02880 1626 aa17.94■□□□□ 0.46
PTPN20-214ENST00000503851 FGD5Q6ZNL6 1462 aa17.93■□□□□ 0.46
PTPN20-214ENST00000503851 TARBP1Q13395 1621 aaKnown RBP17.9■□□□□ 0.46
PTPN20-214ENST00000503851 RAD54L2Q9Y4B4 1467 aa17.88■□□□□ 0.45
PTPN20-214ENST00000503851 IFT140Q96RY7 1462 aa17.85■□□□□ 0.45
PTPN20-214ENST00000503851 WDR97A6NE52 1622 aa17.84■□□□□ 0.45
PTPN20-214ENST00000503851 ZNF608Q9ULD9 1512 aaPredicted RBP17.84■□□□□ 0.45
PTPN20-214ENST00000503851 SOGA1O94964 1423 aa17.83■□□□□ 0.45
PTPN20-214ENST00000503851 EIF4G3O43432 1585 aaKnown RBP17.76■□□□□ 0.43
PTPN20-214ENST00000503851 ABCA10Q8WWZ4 1543 aa17.76■□□□□ 0.43
PTPN20-214ENST00000503851 AQRO60306 1485 aaKnown RBP eCLIP17.75■□□□□ 0.43
PTPN20-214ENST00000503851 TDRD9Q8NDG6 1382 aaKnown RBP17.73■□□□□ 0.43
PTPN20-214ENST00000503851 ABCA5Q8WWZ7 1642 aa17.7■□□□□ 0.42
PTPN20-214ENST00000503851 CHIC1Q5VXU3 224 aa17.69■□□□□ 0.42
PTPN20-214ENST00000503851 DNAJC5Q9H3Z4 198 aa17.68■□□□□ 0.42
PTPN20-214ENST00000503851 PBRM1Q86U86 1689 aa17.65■□□□□ 0.42
PTPN20-214ENST00000503851 TRIM41Q8WV44 630 aa17.65■□□□□ 0.42
PTPN20-214ENST00000503851 GAPVD1Q14C86 1478 aa17.63■□□□□ 0.41
PTPN20-214ENST00000503851 RUSC2Q8N2Y8 1516 aa17.59■□□□□ 0.41
PTPN20-214ENST00000503851 GRIN2BQ13224 1484 aa17.58■□□□□ 0.41
PTPN20-214ENST00000503851 SNAPC4Q5SXM2 1469 aa17.56■□□□□ 0.4
PTPN20-214ENST00000503851 ERICH3Q5RHP9 1530 aa17.53■□□□□ 0.4
PTPN20-214ENST00000503851 CHD1O14646 1710 aa17.53■□□□□ 0.4
PTPN20-214ENST00000503851 KIF27Q86VH2 1401 aa17.53■□□□□ 0.4
PTPN20-214ENST00000503851 MAGI1Q96QZ7 1491 aaPredicted RBP17.51■□□□□ 0.39
PTPN20-214ENST00000503851 IGF1RP08069 1367 aa17.51■□□□□ 0.39
PTPN20-214ENST00000503851 ADAMTS12P58397 1594 aa17.49■□□□□ 0.39
PTPN20-214ENST00000503851 SYNJ2O15056 1496 aa17.45■□□□□ 0.38
PTPN20-214ENST00000503851 FHAD1B1AJZ9 1412 aa17.42■□□□□ 0.38
PTPN20-214ENST00000503851 CUL7Q14999 1698 aa17.42■□□□□ 0.38
PTPN20-214ENST00000503851 GRIN2AQ12879 1464 aa17.39■□□□□ 0.37
PTPN20-214ENST00000503851 FBLN2P98095 1184 aa17.38■□□□□ 0.37
PTPN20-214ENST00000503851 CHMP7Q8WUX9 453 aaPredicted RBP17.37■□□□□ 0.37
PTPN20-214ENST00000503851 CARMIL1Q5VZK9 1371 aa17.37■□□□□ 0.37
PTPN20-214ENST00000503851 CEP170Q5SW79 1584 aa17.35■□□□□ 0.37
PTPN20-214ENST00000503851 OSCARQ8IYS5 282 aa17.34■□□□□ 0.37
PTPN20-214ENST00000503851 PRXQ9BXM0 1461 aa17.33■□□□□ 0.37
PTPN20-214ENST00000503851 EEA1Q15075 1411 aa17.33■□□□□ 0.36
PTPN20-214ENST00000503851 CLASP1Q7Z460 1538 aa17.32■□□□□ 0.36
PTPN20-214ENST00000503851 NUP160Q12769 1436 aa17.32■□□□□ 0.36
PTPN20-214ENST00000503851 FAM9AQ8IZU1 332 aaPredicted RBP17.32■□□□□ 0.36
PTPN20-214ENST00000503851 CSRNP3Q8WYN3 585 aa17.32■□□□□ 0.36
PTPN20-214ENST00000503851 RAPGEF2Q9Y4G8 1499 aa17.29■□□□□ 0.36
PTPN20-214ENST00000503851 KIF21BO75037 1637 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms