RNA–Protein interactions for RNA: ENST00000503784.1

RFC1-206, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-206ENST00000503784 AEBP2Q6ZN18 517 aaPredicted RBP20.82■□□□□ 0.92
RFC1-206ENST00000503784 CHIC1Q5VXU3 224 aa19.38■□□□□ 0.69
RFC1-206ENST00000503784 NISCHQ9Y2I1 1504 aa17.8■□□□□ 0.44
RFC1-206ENST00000503784 SENP3Q9H4L4 574 aaPredicted RBP17.79■□□□□ 0.44
RFC1-206ENST00000503784 PHF23Q9BUL5 403 aaPredicted RBP17.51■□□□□ 0.39
RFC1-206ENST00000503784 ABCC9O60706 1549 aa16.77■□□□□ 0.28
RFC1-206ENST00000503784 FOXD1Q16676 465 aa16.68■□□□□ 0.26
RFC1-206ENST00000503784 POTEDQ86YR6 584 aa16.31■□□□□ 0.2
RFC1-206ENST00000503784 DNAJC5BQ9UF47 199 aa16.16■□□□□ 0.18
RFC1-206ENST00000503784 CCDC180Q9P1Z9 1646 aa16.12■□□□□ 0.17
RFC1-206ENST00000503784 MSH5O43196 834 aa15.76■□□□□ 0.11
RFC1-206ENST00000503784 RB1CC1Q8TDY2 1594 aa15.65■□□□□ 0.1
RFC1-206ENST00000503784 PABPN1Q86U42 306 aaKnown RBP eCLIP15.56■□□□□ 0.08
RFC1-206ENST00000503784 PIAS4Q8N2W9 510 aaPredicted RBP15.42■□□□□ 0.06
RFC1-206ENST00000503784 NACADO15069 1562 aa15.4■□□□□ 0.06
RFC1-206ENST00000503784 DCAF8L2P0C7V8 631 aa15.37■□□□□ 0.05
RFC1-206ENST00000503784 BICRAQ9NZM4 1560 aa15.22■□□□□ 0.03
RFC1-206ENST00000503784 UNC13AQ9UPW8 1703 aa15.22■□□□□ 0.03
RFC1-206ENST00000503784 PPP6R1Q9UPN7 881 aa15.21■□□□□ 0.03
RFC1-206ENST00000503784 DNAJC5Q9H3Z4 198 aa15.16■□□□□ 0.02
RFC1-206ENST00000503784 CECR2Q9BXF3 1484 aa15.14■□□□□ 0.01
RFC1-206ENST00000503784 ADRA2BP18089 450 aa15.11■□□□□ 0.01
RFC1-206ENST00000503784 PLPPR3Q6T4P5 718 aa15.11■□□□□ 0.01
RFC1-206ENST00000503784 CC2D2AQ9P2K1 1620 aa15.06■□□□□ 0
RFC1-206ENST00000503784 MYO15BQ96JP2 1530 aa14.97□□□□□ -0.01
RFC1-206ENST00000503784 SHROOM4Q9ULL8 1493 aa14.91□□□□□ -0.02
RFC1-206ENST00000503784 EIF4G1Q04637 1599 aaKnown RBP14.9□□□□□ -0.02
RFC1-206ENST00000503784 SCRIBQ14160 1630 aa14.8□□□□□ -0.04
RFC1-206ENST00000503784 ZCCHC6Q5VYS8 1495 aaKnown RBP14.66□□□□□ -0.06
RFC1-206ENST00000503784 DCAF1Q9Y4B6 1507 aa14.61□□□□□ -0.07
RFC1-206ENST00000503784 CUX2O14529 1486 aa14.58□□□□□ -0.08
RFC1-206ENST00000503784 ERCC6Q03468 1493 aa14.52□□□□□ -0.08
RFC1-206ENST00000503784 TRIM41Q8WV44 630 aa14.41□□□□□ -0.1
RFC1-206ENST00000503784 NESP48681 1621 aa14.26□□□□□ -0.13
RFC1-206ENST00000503784 NCAPD3P42695 1498 aa14.24□□□□□ -0.13
RFC1-206ENST00000503784 THOC2Q8NI27 1593 aaKnown RBP14.15□□□□□ -0.14
RFC1-206ENST00000503784 ATAD2BQ9ULI0 1458 aa14.15□□□□□ -0.14
RFC1-206ENST00000503784 SMARCA2P51531 1590 aa14.13□□□□□ -0.15
RFC1-206ENST00000503784 HMGXB3Q12766 1538 aa14.09□□□□□ -0.15
RFC1-206ENST00000503784 MAPK8IP2Q13387 824 aaPredicted RBP14.05□□□□□ -0.16
RFC1-206ENST00000503784 DMRT2Q9Y5R5 561 aa14.04□□□□□ -0.16
RFC1-206ENST00000503784 BAZ1BQ9UIG0 1483 aaKnown RBP14.02□□□□□ -0.16
RFC1-206ENST00000503784 SMARCA4P51532 1647 aa13.99□□□□□ -0.17
RFC1-206ENST00000503784 LAMC3Q9Y6N6 1575 aa13.98□□□□□ -0.17
RFC1-206ENST00000503784 KIF21AQ7Z4S6 1674 aa13.98□□□□□ -0.17
RFC1-206ENST00000503784 PDS5BQ9NTI5 1447 aa13.96□□□□□ -0.18
RFC1-206ENST00000503784 BAZ1AQ9NRL2 1556 aaPredicted RBP13.9□□□□□ -0.18
RFC1-206ENST00000503784 MRC2Q9UBG0 1479 aa13.89□□□□□ -0.19
RFC1-206ENST00000503784 OSCARQ8IYS5 282 aa13.86□□□□□ -0.19
RFC1-206ENST00000503784 WDR62O43379 1518 aa13.85□□□□□ -0.19
RFC1-206ENST00000503784 CACNB1Q02641 598 aaPredicted RBP13.84□□□□□ -0.19
RFC1-206ENST00000503784 PEG3Q9GZU2 1588 aa13.81□□□□□ -0.2
RFC1-206ENST00000503784 CADPSQ9ULU8 1353 aa13.81□□□□□ -0.2
RFC1-206ENST00000503784 SCAF1Q9H7N4 1312 aaKnown RBP13.78□□□□□ -0.2
RFC1-206ENST00000503784 MROH2BQ7Z745 1585 aa13.75□□□□□ -0.21
RFC1-206ENST00000503784 CEP164Q9UPV0 1460 aa13.74□□□□□ -0.21
RFC1-206ENST00000503784 RIMBP3CA6NJZ7 1639 aa13.73□□□□□ -0.21
RFC1-206ENST00000503784 RIMBP3BA6NNM3 1639 aa13.73□□□□□ -0.21
RFC1-206ENST00000503784 RIMBP3Q9UFD9 1639 aa13.73□□□□□ -0.21
RFC1-206ENST00000503784 FANCD2Q9BXW9 1451 aa13.68□□□□□ -0.22
RFC1-206ENST00000503784 TRHP20396 242 aaPredicted RBP13.67□□□□□ -0.22
RFC1-206ENST00000503784 ARHGEF11O15085 1522 aa13.65□□□□□ -0.22
RFC1-206ENST00000503784 CYB5RLQ6IPT4 315 aa13.62□□□□□ -0.23
RFC1-206ENST00000503784 URB2Q14146 1524 aaKnown RBP13.6□□□□□ -0.23
RFC1-206ENST00000503784 CFTRP13569 1480 aa13.54□□□□□ -0.24
RFC1-206ENST00000503784 ZNF608Q9ULD9 1512 aaPredicted RBP13.54□□□□□ -0.24
RFC1-206ENST00000503784 WIZO95785 1651 aa13.53□□□□□ -0.24
RFC1-206ENST00000503784 ARAP1Q96P48 1450 aa13.5□□□□□ -0.25
RFC1-206ENST00000503784 IFT140Q96RY7 1462 aa13.47□□□□□ -0.25
RFC1-206ENST00000503784 DCAF8L1A6NGE4 600 aa13.44□□□□□ -0.26
RFC1-206ENST00000503784 RNF39Q9H2S5 420 aa13.44□□□□□ -0.26
RFC1-206ENST00000503784 FBLN2P98095 1184 aa13.42□□□□□ -0.26
RFC1-206ENST00000503784 EIF4G3O43432 1585 aaKnown RBP13.41□□□□□ -0.26
RFC1-206ENST00000503784 RSF1Q96T23 1441 aaPredicted RBP13.37□□□□□ -0.27
RFC1-206ENST00000503784 CHD1O14646 1710 aa13.36□□□□□ -0.27
RFC1-206ENST00000503784 TOPBP1Q92547 1522 aa13.35□□□□□ -0.27
RFC1-206ENST00000503784 AQRO60306 1485 aaKnown RBP eCLIP13.35□□□□□ -0.274e-9■□□□□ 9.9
RFC1-206ENST00000503784 HOXD11P31277 338 aaPredicted RBP13.34□□□□□ -0.27
RFC1-206ENST00000503784 TOP2AP11388 1531 aaKnown RBP13.34□□□□□ -0.27
RFC1-206ENST00000503784 PRDM2Q13029 1718 aa13.25□□□□□ -0.29
RFC1-206ENST00000503784 DNMBPQ6XZF7 1577 aa13.24□□□□□ -0.29
RFC1-206ENST00000503784 TARBP1Q13395 1621 aaKnown RBP13.23□□□□□ -0.29
RFC1-206ENST00000503784 ABCC8Q09428 1581 aa13.22□□□□□ -0.29
RFC1-206ENST00000503784 CLASP1Q7Z460 1538 aa13.21□□□□□ -0.29
RFC1-206ENST00000503784 SNAPC4Q5SXM2 1469 aa13.21□□□□□ -0.3
RFC1-206ENST00000503784 TDRD9Q8NDG6 1382 aaKnown RBP13.2□□□□□ -0.3
RFC1-206ENST00000503784 CCDC88BA6NC98 1476 aa13.2□□□□□ -0.3
RFC1-206ENST00000503784 POLA1P09884 1462 aaPredicted RBP13.19□□□□□ -0.3
RFC1-206ENST00000503784 C1QBPQ07021 282 aaKnown RBP13.19□□□□□ -0.3
RFC1-206ENST00000503784 PPP4R3CPQ6ZMV5 832 aa13.19□□□□□ -0.3
RFC1-206ENST00000503784 RAD54L2Q9Y4B4 1467 aa13.18□□□□□ -0.3
RFC1-206ENST00000503784 CHMP7Q8WUX9 453 aaPredicted RBP13.18□□□□□ -0.3
RFC1-206ENST00000503784 SYNJ1O43426 1573 aa13.16□□□□□ -0.3
RFC1-206ENST00000503784 GAPVD1Q14C86 1478 aa13.15□□□□□ -0.3
RFC1-206ENST00000503784 SOGA1O94964 1423 aa13.13□□□□□ -0.31
RFC1-206ENST00000503784 MAGI1Q96QZ7 1491 aaPredicted RBP13.1□□□□□ -0.31
RFC1-206ENST00000503784 ILDR1Q86SU0 546 aaPredicted RBP13.09□□□□□ -0.31
RFC1-206ENST00000503784 RNF216Q9NWF9 866 aaPredicted RBP13.07□□□□□ -0.32
RFC1-206ENST00000503784 SYNJ2O15056 1496 aa13.07□□□□□ -0.32
RFC1-206ENST00000503784 GRIN2BQ13224 1484 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms