RNA–Protein interactions for RNA: ENST00000502557.5

CCHCR1-216, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 662 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-216ENST00000502557 NISCHQ9Y2I1 1504 aa42.9■■■■■ 4.46
CCHCR1-216ENST00000502557 CCDC180Q9P1Z9 1646 aa37.92■■■■□ 3.66
CCHCR1-216ENST00000502557 ABCC9O60706 1549 aa37.02■■■■□ 3.52
CCHCR1-216ENST00000502557 ZCCHC6Q5VYS8 1495 aaKnown RBP35.8■■■■□ 3.32
CCHCR1-216ENST00000502557 DCAF8L2P0C7V8 631 aa35.79■■■■□ 3.32
CCHCR1-216ENST00000502557 NACADO15069 1562 aa35.68■■■■□ 3.3
CCHCR1-216ENST00000502557 RB1CC1Q8TDY2 1594 aa35.64■■■■□ 3.3
CCHCR1-216ENST00000502557 MYO15BQ96JP2 1530 aa35.56■■■■□ 3.28
CCHCR1-216ENST00000502557 DCAF1Q9Y4B6 1507 aa35.49■■■■□ 3.27
CCHCR1-216ENST00000502557 SCRIBQ14160 1630 aa34.7■■■■□ 3.14
CCHCR1-216ENST00000502557 PABPN1Q86U42 306 aaKnown RBP eCLIP34.69■■■■□ 3.14
CCHCR1-216ENST00000502557 UNC13AQ9UPW8 1703 aa34.69■■■■□ 3.14
CCHCR1-216ENST00000502557 BICRAQ9NZM4 1560 aa34.58■■■■□ 3.13
CCHCR1-216ENST00000502557 SHROOM4Q9ULL8 1493 aa34.23■■■■□ 3.07
CCHCR1-216ENST00000502557 DNAJC5BQ9UF47 199 aa33.85■■■■□ 3.01
CCHCR1-216ENST00000502557 EIF4G1Q04637 1599 aaKnown RBP33.64■■■□□ 2.98
CCHCR1-216ENST00000502557 CC2D2AQ9P2K1 1620 aa33.44■■■□□ 2.94
CCHCR1-216ENST00000502557 CECR2Q9BXF3 1484 aa33.44■■■□□ 2.94
CCHCR1-216ENST00000502557 BAZ1AQ9NRL2 1556 aaPredicted RBP33.21■■■□□ 2.91
CCHCR1-216ENST00000502557 SMARCA4P51532 1647 aa33.19■■■□□ 2.9
CCHCR1-216ENST00000502557 MROH2BQ7Z745 1585 aa33.08■■■□□ 2.89
CCHCR1-216ENST00000502557 ATAD2BQ9ULI0 1458 aa33.03■■■□□ 2.88
CCHCR1-216ENST00000502557 NCAPD3P42695 1498 aa32.98■■■□□ 2.87
CCHCR1-216ENST00000502557 SMARCA2P51531 1590 aa32.94■■■□□ 2.86
CCHCR1-216ENST00000502557 PEG3Q9GZU2 1588 aa32.87■■■□□ 2.85
CCHCR1-216ENST00000502557 RSF1Q96T23 1441 aaPredicted RBP32.82■■■□□ 2.84
CCHCR1-216ENST00000502557 HMGXB3Q12766 1538 aa32.78■■■□□ 2.84
CCHCR1-216ENST00000502557 BAZ1BQ9UIG0 1483 aaKnown RBP32.74■■■□□ 2.83
CCHCR1-216ENST00000502557 WIZO95785 1651 aa32.66■■■□□ 2.82
CCHCR1-216ENST00000502557 TOP2AP11388 1531 aaKnown RBP32.37■■■□□ 2.77
CCHCR1-216ENST00000502557 SUPT5HO00267 1087 aaKnown RBP32.17■■■□□ 2.74
CCHCR1-216ENST00000502557 NESP48681 1621 aa32.11■■■□□ 2.73
CCHCR1-216ENST00000502557 CADPSQ9ULU8 1353 aa32.04■■■□□ 2.72
CCHCR1-216ENST00000502557 CCDC88BA6NC98 1476 aa32.03■■■□□ 2.72
CCHCR1-216ENST00000502557 LAMC3Q9Y6N6 1575 aa31.99■■■□□ 2.71
CCHCR1-216ENST00000502557 CFTRP13569 1480 aa31.88■■■□□ 2.69
CCHCR1-216ENST00000502557 ERCC6Q03468 1493 aa31.87■■■□□ 2.69
CCHCR1-216ENST00000502557 PDS5BQ9NTI5 1447 aa31.83■■■□□ 2.69
CCHCR1-216ENST00000502557 FANCD2Q9BXW9 1451 aa31.65■■■□□ 2.66
CCHCR1-216ENST00000502557 KIF21AQ7Z4S6 1674 aa31.6■■■□□ 2.65
CCHCR1-216ENST00000502557 CEP164Q9UPV0 1460 aa31.57■■■□□ 2.64
CCHCR1-216ENST00000502557 THOC2Q8NI27 1593 aaKnown RBP31.51■■■□□ 2.63
CCHCR1-216ENST00000502557 MRC2Q9UBG0 1479 aa31.49■■■□□ 2.63
CCHCR1-216ENST00000502557 CUX2O14529 1486 aa31.45■■■□□ 2.62
CCHCR1-216ENST00000502557 PRDM2Q13029 1718 aa31.42■■■□□ 2.62
CCHCR1-216ENST00000502557 WDR62O43379 1518 aa31.35■■■□□ 2.61
CCHCR1-216ENST00000502557 URB2Q14146 1524 aaKnown RBP31.33■■■□□ 2.61
CCHCR1-216ENST00000502557 TOPBP1Q92547 1522 aa31.16■■■□□ 2.58
CCHCR1-216ENST00000502557 ABCC8Q09428 1581 aa31.13■■■□□ 2.57
CCHCR1-216ENST00000502557 DNMBPQ6XZF7 1577 aa31.11■■■□□ 2.57
CCHCR1-216ENST00000502557 CUX1P39880 1505 aa31.02■■■□□ 2.56
CCHCR1-216ENST00000502557 POLA1P09884 1462 aaPredicted RBP30.92■■■□□ 2.54
CCHCR1-216ENST00000502557 WRNQ14191 1432 aaPredicted RBP eCLIP30.91■■■□□ 2.54
CCHCR1-216ENST00000502557 IFT140Q96RY7 1462 aa30.91■■■□□ 2.54
CCHCR1-216ENST00000502557 FGD5Q6ZNL6 1462 aa30.88■■■□□ 2.53
CCHCR1-216ENST00000502557 SOGA1O94964 1423 aa30.81■■■□□ 2.52
CCHCR1-216ENST00000502557 DNAJC5Q9H3Z4 198 aa30.81■■■□□ 2.52
CCHCR1-216ENST00000502557 RAD54L2Q9Y4B4 1467 aa30.81■■■□□ 2.52
CCHCR1-216ENST00000502557 SYNJ1O43426 1573 aa30.79■■■□□ 2.52
CCHCR1-216ENST00000502557 ZNF608Q9ULD9 1512 aaPredicted RBP30.77■■■□□ 2.52
CCHCR1-216ENST00000502557 TOP2BQ02880 1626 aa30.76■■■□□ 2.51
CCHCR1-216ENST00000502557 TARBP1Q13395 1621 aaKnown RBP30.76■■■□□ 2.51
CCHCR1-216ENST00000502557 BIVM-ERCC5R4GMW8 1640 aa30.72■■■□□ 2.51
CCHCR1-216ENST00000502557 AQRO60306 1485 aaKnown RBP eCLIP30.63■■■□□ 2.492e-10■■■■■ 47.9
CCHCR1-216ENST00000502557 TDRD9Q8NDG6 1382 aaKnown RBP30.63■■■□□ 2.49
CCHCR1-216ENST00000502557 EIF4G3O43432 1585 aaKnown RBP30.58■■■□□ 2.49
CCHCR1-216ENST00000502557 ABCA10Q8WWZ4 1543 aa30.58■■■□□ 2.49
CCHCR1-216ENST00000502557 WDR97A6NE52 1622 aa30.51■■■□□ 2.47
CCHCR1-216ENST00000502557 GAPVD1Q14C86 1478 aa30.44■■■□□ 2.46
CCHCR1-216ENST00000502557 GRIN2BQ13224 1484 aa30.41■■■□□ 2.46
CCHCR1-216ENST00000502557 ABCA5Q8WWZ7 1642 aa30.39■■■□□ 2.46
CCHCR1-216ENST00000502557 TRIM41Q8WV44 630 aa30.36■■■□□ 2.45
CCHCR1-216ENST00000502557 SNAPC4Q5SXM2 1469 aa30.34■■■□□ 2.45
CCHCR1-216ENST00000502557 MAGI1Q96QZ7 1491 aaPredicted RBP30.28■■■□□ 2.44
CCHCR1-216ENST00000502557 KIF27Q86VH2 1401 aa30.24■■■□□ 2.43
CCHCR1-216ENST00000502557 OSCARQ8IYS5 282 aa30.23■■■□□ 2.43
CCHCR1-216ENST00000502557 PBRM1Q86U86 1689 aa30.23■■■□□ 2.43
CCHCR1-216ENST00000502557 FBLN2P98095 1184 aa30.22■■■□□ 2.43
CCHCR1-216ENST00000502557 ERICH3Q5RHP9 1530 aa30.2■■■□□ 2.42
CCHCR1-216ENST00000502557 CHMP7Q8WUX9 453 aaPredicted RBP30.18■■■□□ 2.42
CCHCR1-216ENST00000502557 SYNJ2O15056 1496 aa30.18■■■□□ 2.42
CCHCR1-216ENST00000502557 CHIC1Q5VXU3 224 aa30.17■■■□□ 2.42
CCHCR1-216ENST00000502557 IGF1RP08069 1367 aa30.14■■■□□ 2.41
CCHCR1-216ENST00000502557 FHAD1B1AJZ9 1412 aa30.11■■■□□ 2.41
CCHCR1-216ENST00000502557 ADAMTS12P58397 1594 aa30.1■■■□□ 2.41
CCHCR1-216ENST00000502557 CHD1O14646 1710 aa30.08■■■□□ 2.41
CCHCR1-216ENST00000502557 RUSC2Q8N2Y8 1516 aa30.06■■■□□ 2.4
CCHCR1-216ENST00000502557 GRIN2AQ12879 1464 aa30.01■■■□□ 2.4
CCHCR1-216ENST00000502557 CARMIL1Q5VZK9 1371 aa29.95■■■□□ 2.39
CCHCR1-216ENST00000502557 CUL7Q14999 1698 aa29.91■■■□□ 2.38
CCHCR1-216ENST00000502557 NUP160Q12769 1436 aa29.89■■■□□ 2.38
CCHCR1-216ENST00000502557 CLASP1Q7Z460 1538 aa29.87■■■□□ 2.37
CCHCR1-216ENST00000502557 CEP170Q5SW79 1584 aa29.83■■■□□ 2.37
CCHCR1-216ENST00000502557 EEA1Q15075 1411 aa29.8■■■□□ 2.36
CCHCR1-216ENST00000502557 CSRNP3Q8WYN3 585 aa29.78■■■□□ 2.36
CCHCR1-216ENST00000502557 RAPGEF2Q9Y4G8 1499 aa29.77■■■□□ 2.36
CCHCR1-216ENST00000502557 FAM9AQ8IZU1 332 aaPredicted RBP29.74■■■□□ 2.35
CCHCR1-216ENST00000502557 PRXQ9BXM0 1461 aa29.74■■■□□ 2.35
CCHCR1-216ENST00000502557 ARHGEF11O15085 1522 aa29.7■■■□□ 2.34
CCHCR1-216ENST00000502557 KIAA0586Q9BVV6 1533 aa29.66■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms