RNA–Protein interactions for RNA: ENST00000502442.1

CGN-207, Transcript of cingulin, humanhuman

TSL 1 (best)

Gene CGN, Length 589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGN-207ENST00000502442 NISCHQ9Y2I1 1504 aa21.19■□□□□ 0.98
CGN-207ENST00000502442 CCDC180Q9P1Z9 1646 aa18.58■□□□□ 0.56
CGN-207ENST00000502442 ABCC9O60706 1549 aa18.29■□□□□ 0.52
CGN-207ENST00000502442 ZCCHC6Q5VYS8 1495 aaKnown RBP17.85■□□□□ 0.45
CGN-207ENST00000502442 DCAF1Q9Y4B6 1507 aa17.55■□□□□ 0.4
CGN-207ENST00000502442 DCAF8L2P0C7V8 631 aa17.4■□□□□ 0.38
CGN-207ENST00000502442 RB1CC1Q8TDY2 1594 aa17.36■□□□□ 0.37
CGN-207ENST00000502442 SHROOM4Q9ULL8 1493 aa17.34■□□□□ 0.37
CGN-207ENST00000502442 MYO15BQ96JP2 1530 aa17.3■□□□□ 0.36
CGN-207ENST00000502442 DNAJC5BQ9UF47 199 aa17.27■□□□□ 0.36
CGN-207ENST00000502442 NACADO15069 1562 aa17.2■□□□□ 0.34
CGN-207ENST00000502442 SCRIBQ14160 1630 aa17.04■□□□□ 0.32
CGN-207ENST00000502442 PABPN1Q86U42 306 aaKnown RBP eCLIP16.97■□□□□ 0.31
CGN-207ENST00000502442 UNC13AQ9UPW8 1703 aa16.93■□□□□ 0.3
CGN-207ENST00000502442 BICRAQ9NZM4 1560 aa16.76■□□□□ 0.27
CGN-207ENST00000502442 SUPT5HO00267 1087 aaKnown RBP16.71■□□□□ 0.27
CGN-207ENST00000502442 CC2D2AQ9P2K1 1620 aa16.52■□□□□ 0.24
CGN-207ENST00000502442 CECR2Q9BXF3 1484 aa16.51■□□□□ 0.23
CGN-207ENST00000502442 BAZ1AQ9NRL2 1556 aaPredicted RBP16.43■□□□□ 0.22
CGN-207ENST00000502442 RSF1Q96T23 1441 aaPredicted RBP16.42■□□□□ 0.22
CGN-207ENST00000502442 EIF4G1Q04637 1599 aaKnown RBP16.42■□□□□ 0.22
CGN-207ENST00000502442 MROH2BQ7Z745 1585 aa16.34■□□□□ 0.21
CGN-207ENST00000502442 SMARCA4P51532 1647 aa16.33■□□□□ 0.2
CGN-207ENST00000502442 WIZO95785 1651 aa16.27■□□□□ 0.19
CGN-207ENST00000502442 TOP2AP11388 1531 aaKnown RBP16.16■□□□□ 0.18
CGN-207ENST00000502442 DNAJC5Q9H3Z4 198 aa16.13■□□□□ 0.17
CGN-207ENST00000502442 PEG3Q9GZU2 1588 aa16.09■□□□□ 0.17
CGN-207ENST00000502442 SMARCA2P51531 1590 aa16.04■□□□□ 0.16
CGN-207ENST00000502442 CHIC1Q5VXU3 224 aa16■□□□□ 0.15
CGN-207ENST00000502442 BAZ1BQ9UIG0 1483 aaKnown RBP15.95■□□□□ 0.14
CGN-207ENST00000502442 ATAD2BQ9ULI0 1458 aa15.94■□□□□ 0.14
CGN-207ENST00000502442 CUX2O14529 1486 aa15.9■□□□□ 0.14
CGN-207ENST00000502442 ERCC6Q03468 1493 aa15.89■□□□□ 0.13
CGN-207ENST00000502442 CCDC88BA6NC98 1476 aa15.88■□□□□ 0.13
CGN-207ENST00000502442 HMGXB3Q12766 1538 aa15.88■□□□□ 0.13
CGN-207ENST00000502442 NCAPD3P42695 1498 aa15.79■□□□□ 0.12
CGN-207ENST00000502442 TRIM41Q8WV44 630 aa15.74■□□□□ 0.11
CGN-207ENST00000502442 ABCC8Q09428 1581 aa15.63■□□□□ 0.09
CGN-207ENST00000502442 PRDM2Q13029 1718 aa15.63■□□□□ 0.09
CGN-207ENST00000502442 NESP48681 1621 aa15.61■□□□□ 0.09
CGN-207ENST00000502442 LAMC3Q9Y6N6 1575 aa15.54■□□□□ 0.08
CGN-207ENST00000502442 WRNQ14191 1432 aaPredicted RBP eCLIP15.53■□□□□ 0.08
CGN-207ENST00000502442 THOC2Q8NI27 1593 aaKnown RBP15.53■□□□□ 0.08
CGN-207ENST00000502442 SYNJ1O43426 1573 aa15.47■□□□□ 0.07
CGN-207ENST00000502442 PDS5BQ9NTI5 1447 aa15.47■□□□□ 0.07
CGN-207ENST00000502442 KIF21AQ7Z4S6 1674 aa15.47■□□□□ 0.07
CGN-207ENST00000502442 CFTRP13569 1480 aa15.46■□□□□ 0.07
CGN-207ENST00000502442 BIVM-ERCC5R4GMW8 1640 aa15.44■□□□□ 0.06
CGN-207ENST00000502442 EEA1Q15075 1411 aa15.43■□□□□ 0.06
CGN-207ENST00000502442 TOP2BQ02880 1626 aa15.43■□□□□ 0.06
CGN-207ENST00000502442 FAM9AQ8IZU1 332 aaPredicted RBP15.42■□□□□ 0.06
CGN-207ENST00000502442 CADPSQ9ULU8 1353 aa15.37■□□□□ 0.05
CGN-207ENST00000502442 LOC105371045A0A1W2PR82 267 aa15.34■□□□□ 0.05
CGN-207ENST00000502442 MRC2Q9UBG0 1479 aa15.32■□□□□ 0.04
CGN-207ENST00000502442 CUX1P39880 1505 aa15.3■□□□□ 0.04
CGN-207ENST00000502442 SOGA1O94964 1423 aa15.29■□□□□ 0.04
CGN-207ENST00000502442 FANCD2Q9BXW9 1451 aa15.27■□□□□ 0.04
CGN-207ENST00000502442 WDR62O43379 1518 aa15.27■□□□□ 0.03
CGN-207ENST00000502442 KIF21BO75037 1637 aa15.25■□□□□ 0.03
CGN-207ENST00000502442 GOLGA3Q08378 1498 aa15.23■□□□□ 0.03
CGN-207ENST00000502442 CEP164Q9UPV0 1460 aa15.23■□□□□ 0.03
CGN-207ENST00000502442 DNMBPQ6XZF7 1577 aa15.21■□□□□ 0.03
CGN-207ENST00000502442 EHMT2Q96KQ7 1210 aa15.2■□□□□ 0.02
CGN-207ENST00000502442 RUSC2Q8N2Y8 1516 aa15.19■□□□□ 0.02
CGN-207ENST00000502442 CSRNP3Q8WYN3 585 aa15.19■□□□□ 0.02
CGN-207ENST00000502442 OSCARQ8IYS5 282 aa15.16■□□□□ 0.02
CGN-207ENST00000502442 KIF27Q86VH2 1401 aa15.15■□□□□ 0.02
CGN-207ENST00000502442 FGD5Q6ZNL6 1462 aa15.14■□□□□ 0.01
CGN-207ENST00000502442 TOPBP1Q92547 1522 aa15.12■□□□□ 0.01
CGN-207ENST00000502442 TNIKQ9UKE5 1360 aa15.11■□□□□ 0.01
CGN-207ENST00000502442 ERICH3Q5RHP9 1530 aa15.11■□□□□ 0.01
CGN-207ENST00000502442 CEP162Q5TB80 1403 aa15.08■□□□□ 0
CGN-207ENST00000502442 UBTFP17480 764 aaKnown RBP15.07■□□□□ 0
CGN-207ENST00000502442 URB2Q14146 1524 aaKnown RBP15.03■□□□□ -0
CGN-207ENST00000502442 POLA1P09884 1462 aaPredicted RBP15.03■□□□□ -0
CGN-207ENST00000502442 WDR97A6NE52 1622 aa15.03■□□□□ -0
CGN-207ENST00000502442 RAPGEF2Q9Y4G8 1499 aa15.01□□□□□ -0.01
CGN-207ENST00000502442 ABCA10Q8WWZ4 1543 aa15.01□□□□□ -0.01
CGN-207ENST00000502442 PRXQ9BXM0 1461 aa15.01□□□□□ -0.01
CGN-207ENST00000502442 CUL7Q14999 1698 aa14.98□□□□□ -0.01
CGN-207ENST00000502442 RIMBP3CA6NJZ7 1639 aa14.95□□□□□ -0.02
CGN-207ENST00000502442 RIMBP3BA6NNM3 1639 aa14.95□□□□□ -0.02
CGN-207ENST00000502442 RIMBP3Q9UFD9 1639 aa14.95□□□□□ -0.02
CGN-207ENST00000502442 RAD54L2Q9Y4B4 1467 aa14.95□□□□□ -0.02
CGN-207ENST00000502442 CLIP1P30622 1438 aa14.94□□□□□ -0.02
CGN-207ENST00000502442 ABCA5Q8WWZ7 1642 aa14.93□□□□□ -0.02
CGN-207ENST00000502442 IFT140Q96RY7 1462 aa14.91□□□□□ -0.02
CGN-207ENST00000502442 TARBP1Q13395 1621 aaKnown RBP14.88□□□□□ -0.03
CGN-207ENST00000502442 PBRM1Q86U86 1689 aa14.87□□□□□ -0.03
CGN-207ENST00000502442 TRIM26Q12899 539 aaPredicted RBP14.87□□□□□ -0.03
CGN-207ENST00000502442 IGF1RP08069 1367 aa14.86□□□□□ -0.03
CGN-207ENST00000502442 CARMIL1Q5VZK9 1371 aa14.86□□□□□ -0.03
CGN-207ENST00000502442 PCGF6Q9BYE7 350 aa14.86□□□□□ -0.03
CGN-207ENST00000502442 CTTNBP2Q8WZ74 1663 aa14.86□□□□□ -0.03
CGN-207ENST00000502442 ARHGEF11O15085 1522 aa14.86□□□□□ -0.03
CGN-207ENST00000502442 ZNF608Q9ULD9 1512 aaPredicted RBP14.85□□□□□ -0.03
CGN-207ENST00000502442 GAPVD1Q14C86 1478 aa14.84□□□□□ -0.03
CGN-207ENST00000502442 VPS8Q8N3P4 1428 aa14.83□□□□□ -0.03
CGN-207ENST00000502442 EIF4G3O43432 1585 aaKnown RBP14.82□□□□□ -0.04
CGN-207ENST00000502442 CYB5RLQ6IPT4 315 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms