RNA–Protein interactions for RNA: ENST00000499242.2

LINC02447-201, Transcript of long intergenic non-protein coding RNA 2447, humanhuman

TSL 1 (best) BASIC

Gene LINC02447, Length 1,500 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02447-201ENST00000499242 AEBP2Q6ZN18 517 aaPredicted RBP19.76■□□□□ 0.75
LINC02447-201ENST00000499242 CHIC1Q5VXU3 224 aa18.49■□□□□ 0.55
LINC02447-201ENST00000499242 NISCHQ9Y2I1 1504 aa17.03■□□□□ 0.32
LINC02447-201ENST00000499242 SENP3Q9H4L4 574 aaPredicted RBP17.02■□□□□ 0.32
LINC02447-201ENST00000499242 PHF23Q9BUL5 403 aaPredicted RBP16.65■□□□□ 0.26
LINC02447-201ENST00000499242 POTEDQ86YR6 584 aa16.08■□□□□ 0.16
LINC02447-201ENST00000499242 FOXD1Q16676 465 aa15.92■□□□□ 0.14
LINC02447-201ENST00000499242 MSH5O43196 834 aa15.22■□□□□ 0.03
LINC02447-201ENST00000499242 CCDC180Q9P1Z9 1646 aa15.21■□□□□ 0.03
LINC02447-201ENST00000499242 ABCC9O60706 1549 aa14.76□□□□□ -0.05
LINC02447-201ENST00000499242 PIAS4Q8N2W9 510 aaPredicted RBP14.68□□□□□ -0.06
LINC02447-201ENST00000499242 PPP6R1Q9UPN7 881 aa14.29□□□□□ -0.12
LINC02447-201ENST00000499242 RB1CC1Q8TDY2 1594 aa14.27□□□□□ -0.12
LINC02447-201ENST00000499242 DCAF8L2P0C7V8 631 aa14.25□□□□□ -0.13
LINC02447-201ENST00000499242 NACADO15069 1562 aa14.24□□□□□ -0.13
LINC02447-201ENST00000499242 ADRA2BP18089 450 aa14.2□□□□□ -0.14
LINC02447-201ENST00000499242 ZCCHC6Q5VYS8 1495 aaKnown RBP14.19□□□□□ -0.14
LINC02447-201ENST00000499242 MYO15BQ96JP2 1530 aa14.13□□□□□ -0.15
LINC02447-201ENST00000499242 PLPPR3Q6T4P5 718 aa14.12□□□□□ -0.15
LINC02447-201ENST00000499242 DCAF1Q9Y4B6 1507 aa14.09□□□□□ -0.15
LINC02447-201ENST00000499242 UNC13AQ9UPW8 1703 aa14.03□□□□□ -0.16
LINC02447-201ENST00000499242 SCRIBQ14160 1630 aa13.85□□□□□ -0.19
LINC02447-201ENST00000499242 DNAJC5BQ9UF47 199 aa13.8□□□□□ -0.2
LINC02447-201ENST00000499242 BICRAQ9NZM4 1560 aa13.78□□□□□ -0.2
LINC02447-201ENST00000499242 PABPN1Q86U42 306 aaKnown RBP eCLIP13.77□□□□□ -0.21
LINC02447-201ENST00000499242 SHROOM4Q9ULL8 1493 aa13.66□□□□□ -0.22
LINC02447-201ENST00000499242 CACNB1Q02641 598 aaPredicted RBP13.47□□□□□ -0.25
LINC02447-201ENST00000499242 EIF4G1Q04637 1599 aaKnown RBP13.44□□□□□ -0.26
LINC02447-201ENST00000499242 CC2D2AQ9P2K1 1620 aa13.4□□□□□ -0.27
LINC02447-201ENST00000499242 DMRT2Q9Y5R5 561 aa13.39□□□□□ -0.27
LINC02447-201ENST00000499242 CECR2Q9BXF3 1484 aa13.25□□□□□ -0.29
LINC02447-201ENST00000499242 MAPK8IP2Q13387 824 aaPredicted RBP13.25□□□□□ -0.29
LINC02447-201ENST00000499242 SMARCA4P51532 1647 aa13.24□□□□□ -0.29
LINC02447-201ENST00000499242 BAZ1AQ9NRL2 1556 aaPredicted RBP13.24□□□□□ -0.29
LINC02447-201ENST00000499242 SMARCA2P51531 1590 aa13.15□□□□□ -0.3
LINC02447-201ENST00000499242 MROH2BQ7Z745 1585 aa13.12□□□□□ -0.31
LINC02447-201ENST00000499242 ATAD2BQ9ULI0 1458 aa13.1□□□□□ -0.31
LINC02447-201ENST00000499242 PEG3Q9GZU2 1588 aa13.09□□□□□ -0.31
LINC02447-201ENST00000499242 NCAPD3P42695 1498 aa13.09□□□□□ -0.31
LINC02447-201ENST00000499242 HMGXB3Q12766 1538 aa13.07□□□□□ -0.32
LINC02447-201ENST00000499242 SCAF1Q9H7N4 1312 aaKnown RBP13.05□□□□□ -0.32
LINC02447-201ENST00000499242 BAZ1BQ9UIG0 1483 aaKnown RBP13.04□□□□□ -0.32
LINC02447-201ENST00000499242 WIZO95785 1651 aa13.04□□□□□ -0.32
LINC02447-201ENST00000499242 RSF1Q96T23 1441 aaPredicted RBP12.96□□□□□ -0.33
LINC02447-201ENST00000499242 RNF39Q9H2S5 420 aa12.91□□□□□ -0.34
LINC02447-201ENST00000499242 TOP2AP11388 1531 aaKnown RBP12.88□□□□□ -0.35
LINC02447-201ENST00000499242 LAMC3Q9Y6N6 1575 aa12.81□□□□□ -0.36
LINC02447-201ENST00000499242 DCAF8L1A6NGE4 600 aa12.78□□□□□ -0.36
LINC02447-201ENST00000499242 NESP48681 1621 aa12.78□□□□□ -0.36
LINC02447-201ENST00000499242 ERCC6Q03468 1493 aa12.76□□□□□ -0.37
LINC02447-201ENST00000499242 PRDM2Q13029 1718 aa12.74□□□□□ -0.37
LINC02447-201ENST00000499242 KIF21AQ7Z4S6 1674 aa12.73□□□□□ -0.37
LINC02447-201ENST00000499242 CADPSQ9ULU8 1353 aa12.71□□□□□ -0.37
LINC02447-201ENST00000499242 SUPT5HO00267 1087 aaKnown RBP12.71□□□□□ -0.38
LINC02447-201ENST00000499242 C1QBPQ07021 282 aaKnown RBP12.69□□□□□ -0.38
LINC02447-201ENST00000499242 CCDC88BA6NC98 1476 aa12.69□□□□□ -0.38
LINC02447-201ENST00000499242 PDS5BQ9NTI5 1447 aa12.68□□□□□ -0.38
LINC02447-201ENST00000499242 CUX2O14529 1486 aa12.65□□□□□ -0.38
LINC02447-201ENST00000499242 CFTRP13569 1480 aa12.65□□□□□ -0.38
LINC02447-201ENST00000499242 DNAJC5Q9H3Z4 198 aa12.64□□□□□ -0.39
LINC02447-201ENST00000499242 HOXD11P31277 338 aaPredicted RBP12.62□□□□□ -0.39
LINC02447-201ENST00000499242 THOC2Q8NI27 1593 aaKnown RBP12.62□□□□□ -0.39
LINC02447-201ENST00000499242 FANCD2Q9BXW9 1451 aa12.6□□□□□ -0.39
LINC02447-201ENST00000499242 CEP164Q9UPV0 1460 aa12.6□□□□□ -0.39
LINC02447-201ENST00000499242 MRC2Q9UBG0 1479 aa12.55□□□□□ -0.4
LINC02447-201ENST00000499242 PELP1Q8IZL8 1130 aaKnown RBP12.53□□□□□ -0.4
LINC02447-201ENST00000499242 WDR62O43379 1518 aa12.51□□□□□ -0.41
LINC02447-201ENST00000499242 POTEHQ6S545 545 aa12.46□□□□□ -0.42
LINC02447-201ENST00000499242 URB2Q14146 1524 aaKnown RBP12.44□□□□□ -0.42
LINC02447-201ENST00000499242 ABCC8Q09428 1581 aa12.43□□□□□ -0.42
LINC02447-201ENST00000499242 DNMBPQ6XZF7 1577 aa12.41□□□□□ -0.42
LINC02447-201ENST00000499242 HRCP23327 699 aa12.4□□□□□ -0.42
LINC02447-201ENST00000499242 TOPBP1Q92547 1522 aa12.39□□□□□ -0.43
LINC02447-201ENST00000499242 CUX1P39880 1505 aa12.31□□□□□ -0.44
LINC02447-201ENST00000499242 IFT140Q96RY7 1462 aa12.31□□□□□ -0.44
LINC02447-201ENST00000499242 RNF216Q9NWF9 866 aaPredicted RBP12.31□□□□□ -0.44
LINC02447-201ENST00000499242 POLA1P09884 1462 aaPredicted RBP12.29□□□□□ -0.44
LINC02447-201ENST00000499242 TARBP1Q13395 1621 aaKnown RBP12.28□□□□□ -0.44
LINC02447-201ENST00000499242 BIVM-ERCC5R4GMW8 1640 aa12.28□□□□□ -0.44
LINC02447-201ENST00000499242 FGD5Q6ZNL6 1462 aa12.27□□□□□ -0.44
LINC02447-201ENST00000499242 PPP4R3CPQ6ZMV5 832 aa12.27□□□□□ -0.45
LINC02447-201ENST00000499242 TOP2BQ02880 1626 aa12.26□□□□□ -0.45
LINC02447-201ENST00000499242 WRNQ14191 1432 aaPredicted RBP eCLIP12.25□□□□□ -0.45
LINC02447-201ENST00000499242 EIF4G3O43432 1585 aaKnown RBP12.25□□□□□ -0.45
LINC02447-201ENST00000499242 SOGA1O94964 1423 aa12.24□□□□□ -0.45
LINC02447-201ENST00000499242 SYNJ1O43426 1573 aa12.24□□□□□ -0.45
LINC02447-201ENST00000499242 MYT1Q01538 1121 aa12.23□□□□□ -0.45
LINC02447-201ENST00000499242 WDR97A6NE52 1622 aa12.23□□□□□ -0.45
LINC02447-201ENST00000499242 ZNF608Q9ULD9 1512 aaPredicted RBP12.23□□□□□ -0.45
LINC02447-201ENST00000499242 CNKSR2Q8WXI2 1034 aa12.22□□□□□ -0.45
LINC02447-201ENST00000499242 RAD54L2Q9Y4B4 1467 aa12.22□□□□□ -0.45
LINC02447-201ENST00000499242 PBRM1Q86U86 1689 aa12.18□□□□□ -0.46
LINC02447-201ENST00000499242 AQRO60306 1485 aaKnown RBP eCLIP12.17□□□□□ -0.46
LINC02447-201ENST00000499242 ABCA10Q8WWZ4 1543 aa12.15□□□□□ -0.46
LINC02447-201ENST00000499242 TDRD9Q8NDG6 1382 aaKnown RBP12.15□□□□□ -0.46
LINC02447-201ENST00000499242 CHD1O14646 1710 aa12.14□□□□□ -0.47
LINC02447-201ENST00000499242 ABCA5Q8WWZ7 1642 aa12.13□□□□□ -0.47
LINC02447-201ENST00000499242 GAPVD1Q14C86 1478 aa12.11□□□□□ -0.47
LINC02447-201ENST00000499242 GRIN2BQ13224 1484 aa12.1□□□□□ -0.47
LINC02447-201ENST00000499242 SNAPC4Q5SXM2 1469 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms