RNA–Protein interactions for RNA: ENST00000498803.5

SPIRE1-211, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 4

Gene SPIRE1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-211ENST00000498803 NISCHQ9Y2I1 1504 aa19.09■□□□□ 0.65
SPIRE1-211ENST00000498803 CCDC180Q9P1Z9 1646 aa16.67■□□□□ 0.26
SPIRE1-211ENST00000498803 ZCCHC6Q5VYS8 1495 aaKnown RBP16.03■□□□□ 0.16
SPIRE1-211ENST00000498803 DCAF1Q9Y4B6 1507 aa15.86■□□□□ 0.13
SPIRE1-211ENST00000498803 DCAF8L2P0C7V8 631 aa15.74■□□□□ 0.11
SPIRE1-211ENST00000498803 ABCC9O60706 1549 aa15.72■□□□□ 0.11
SPIRE1-211ENST00000498803 MYO15BQ96JP2 1530 aa15.72■□□□□ 0.11
SPIRE1-211ENST00000498803 NACADO15069 1562 aa15.58■□□□□ 0.09
SPIRE1-211ENST00000498803 SHROOM4Q9ULL8 1493 aa15.43■□□□□ 0.06
SPIRE1-211ENST00000498803 RB1CC1Q8TDY2 1594 aa15.43■□□□□ 0.06
SPIRE1-211ENST00000498803 SCRIBQ14160 1630 aa15.23■□□□□ 0.03
SPIRE1-211ENST00000498803 UNC13AQ9UPW8 1703 aa14.94□□□□□ -0.02
SPIRE1-211ENST00000498803 SUPT5HO00267 1087 aaKnown RBP14.9□□□□□ -0.02
SPIRE1-211ENST00000498803 BICRAQ9NZM4 1560 aa14.86□□□□□ -0.03
SPIRE1-211ENST00000498803 PABPN1Q86U42 306 aaKnown RBP eCLIP14.82□□□□□ -0.04
SPIRE1-211ENST00000498803 RSF1Q96T23 1441 aaPredicted RBP14.79□□□□□ -0.04
SPIRE1-211ENST00000498803 BAZ1AQ9NRL2 1556 aaPredicted RBP14.77□□□□□ -0.04
SPIRE1-211ENST00000498803 CECR2Q9BXF3 1484 aa14.76□□□□□ -0.05
SPIRE1-211ENST00000498803 MROH2BQ7Z745 1585 aa14.68□□□□□ -0.06
SPIRE1-211ENST00000498803 SMARCA4P51532 1647 aa14.65□□□□□ -0.06
SPIRE1-211ENST00000498803 WIZO95785 1651 aa14.52□□□□□ -0.08
SPIRE1-211ENST00000498803 PEG3Q9GZU2 1588 aa14.52□□□□□ -0.08
SPIRE1-211ENST00000498803 SMARCA2P51531 1590 aa14.49□□□□□ -0.09
SPIRE1-211ENST00000498803 TOP2AP11388 1531 aaKnown RBP14.47□□□□□ -0.09
SPIRE1-211ENST00000498803 EIF4G1Q04637 1599 aaKnown RBP14.47□□□□□ -0.09
SPIRE1-211ENST00000498803 ATAD2BQ9ULI0 1458 aa14.44□□□□□ -0.1
SPIRE1-211ENST00000498803 BAZ1BQ9UIG0 1483 aaKnown RBP14.38□□□□□ -0.11
SPIRE1-211ENST00000498803 NCAPD3P42695 1498 aa14.38□□□□□ -0.11
SPIRE1-211ENST00000498803 HMGXB3Q12766 1538 aa14.34□□□□□ -0.11
SPIRE1-211ENST00000498803 CCDC88BA6NC98 1476 aa14.3□□□□□ -0.12
SPIRE1-211ENST00000498803 CHIC1Q5VXU3 224 aa14.27□□□□□ -0.13
SPIRE1-211ENST00000498803 CC2D2AQ9P2K1 1620 aa14.23□□□□□ -0.13
SPIRE1-211ENST00000498803 TRIM41Q8WV44 630 aa14.09□□□□□ -0.15
SPIRE1-211ENST00000498803 CFTRP13569 1480 aa14.03□□□□□ -0.16
SPIRE1-211ENST00000498803 CADPSQ9ULU8 1353 aa14□□□□□ -0.17
SPIRE1-211ENST00000498803 WRNQ14191 1432 aaPredicted RBP eCLIP13.95□□□□□ -0.18
SPIRE1-211ENST00000498803 ABCC8Q09428 1581 aa13.91□□□□□ -0.18
SPIRE1-211ENST00000498803 LAMC3Q9Y6N6 1575 aa13.88□□□□□ -0.19
SPIRE1-211ENST00000498803 PRDM2Q13029 1718 aa13.87□□□□□ -0.19
SPIRE1-211ENST00000498803 DNAJC5BQ9UF47 199 aa13.84□□□□□ -0.19
SPIRE1-211ENST00000498803 EEA1Q15075 1411 aa13.82□□□□□ -0.2
SPIRE1-211ENST00000498803 PDS5BQ9NTI5 1447 aa13.82□□□□□ -0.2
SPIRE1-211ENST00000498803 FANCD2Q9BXW9 1451 aa13.81□□□□□ -0.2
SPIRE1-211ENST00000498803 TOP2BQ02880 1626 aa13.81□□□□□ -0.2
SPIRE1-211ENST00000498803 SYNJ1O43426 1573 aa13.79□□□□□ -0.2
SPIRE1-211ENST00000498803 BIVM-ERCC5R4GMW8 1640 aa13.78□□□□□ -0.2
SPIRE1-211ENST00000498803 NESP48681 1621 aa13.75□□□□□ -0.21
SPIRE1-211ENST00000498803 CEP164Q9UPV0 1460 aa13.74□□□□□ -0.21
SPIRE1-211ENST00000498803 CUX1P39880 1505 aa13.74□□□□□ -0.21
SPIRE1-211ENST00000498803 FAM9AQ8IZU1 332 aaPredicted RBP13.73□□□□□ -0.21
SPIRE1-211ENST00000498803 CSRNP3Q8WYN3 585 aa13.69□□□□□ -0.22
SPIRE1-211ENST00000498803 SOGA1O94964 1423 aa13.69□□□□□ -0.22
SPIRE1-211ENST00000498803 DNMBPQ6XZF7 1577 aa13.68□□□□□ -0.22
SPIRE1-211ENST00000498803 LOC105371045A0A1W2PR82 267 aa13.65□□□□□ -0.22
SPIRE1-211ENST00000498803 KIF27Q86VH2 1401 aa13.64□□□□□ -0.23
SPIRE1-211ENST00000498803 TOPBP1Q92547 1522 aa13.64□□□□□ -0.23
SPIRE1-211ENST00000498803 FGD5Q6ZNL6 1462 aa13.62□□□□□ -0.23
SPIRE1-211ENST00000498803 MRC2Q9UBG0 1479 aa13.6□□□□□ -0.23
SPIRE1-211ENST00000498803 URB2Q14146 1524 aaKnown RBP13.59□□□□□ -0.23
SPIRE1-211ENST00000498803 RUSC2Q8N2Y8 1516 aa13.59□□□□□ -0.23
SPIRE1-211ENST00000498803 KIF21AQ7Z4S6 1674 aa13.57□□□□□ -0.24
SPIRE1-211ENST00000498803 POLA1P09884 1462 aaPredicted RBP13.57□□□□□ -0.24
SPIRE1-211ENST00000498803 ERCC6Q03468 1493 aa13.56□□□□□ -0.24
SPIRE1-211ENST00000498803 GOLGA3Q08378 1498 aa13.56□□□□□ -0.24
SPIRE1-211ENST00000498803 CUX2O14529 1486 aa13.55□□□□□ -0.24
SPIRE1-211ENST00000498803 ABCA10Q8WWZ4 1543 aa13.54□□□□□ -0.24
SPIRE1-211ENST00000498803 KIF21BO75037 1637 aa13.54□□□□□ -0.24
SPIRE1-211ENST00000498803 TNIKQ9UKE5 1360 aa13.52□□□□□ -0.25
SPIRE1-211ENST00000498803 WDR62O43379 1518 aa13.5□□□□□ -0.25
SPIRE1-211ENST00000498803 UBTFP17480 764 aaKnown RBP13.5□□□□□ -0.25
SPIRE1-211ENST00000498803 ERICH3Q5RHP9 1530 aa13.49□□□□□ -0.25
SPIRE1-211ENST00000498803 PRXQ9BXM0 1461 aa13.49□□□□□ -0.25
SPIRE1-211ENST00000498803 RAD54L2Q9Y4B4 1467 aa13.48□□□□□ -0.25
SPIRE1-211ENST00000498803 IGF1RP08069 1367 aa13.47□□□□□ -0.25
SPIRE1-211ENST00000498803 IFT140Q96RY7 1462 aa13.45□□□□□ -0.26
SPIRE1-211ENST00000498803 EHMT2Q96KQ7 1210 aa13.45□□□□□ -0.26
SPIRE1-211ENST00000498803 RAPGEF2Q9Y4G8 1499 aa13.43□□□□□ -0.26
SPIRE1-211ENST00000498803 CARMIL1Q5VZK9 1371 aa13.43□□□□□ -0.26
SPIRE1-211ENST00000498803 WDR97A6NE52 1622 aa13.42□□□□□ -0.26
SPIRE1-211ENST00000498803 GAPVD1Q14C86 1478 aa13.42□□□□□ -0.26
SPIRE1-211ENST00000498803 TARBP1Q13395 1621 aaKnown RBP13.41□□□□□ -0.26
SPIRE1-211ENST00000498803 THOC2Q8NI27 1593 aaKnown RBP13.41□□□□□ -0.26
SPIRE1-211ENST00000498803 CEP162Q5TB80 1403 aa13.39□□□□□ -0.27
SPIRE1-211ENST00000498803 TDRD9Q8NDG6 1382 aaKnown RBP13.39□□□□□ -0.27
SPIRE1-211ENST00000498803 ABCA5Q8WWZ7 1642 aa13.39□□□□□ -0.27
SPIRE1-211ENST00000498803 CUL7Q14999 1698 aa13.38□□□□□ -0.27
SPIRE1-211ENST00000498803 GRIN2BQ13224 1484 aa13.34□□□□□ -0.27
SPIRE1-211ENST00000498803 CLIP1P30622 1438 aa13.33□□□□□ -0.28
SPIRE1-211ENST00000498803 FHAD1B1AJZ9 1412 aa13.3□□□□□ -0.28
SPIRE1-211ENST00000498803 AQRO60306 1485 aaKnown RBP eCLIP13.29□□□□□ -0.28
SPIRE1-211ENST00000498803 ZNF608Q9ULD9 1512 aaPredicted RBP13.26□□□□□ -0.29
SPIRE1-211ENST00000498803 PBRM1Q86U86 1689 aa13.24□□□□□ -0.29
SPIRE1-211ENST00000498803 MAGI1Q96QZ7 1491 aaPredicted RBP13.23□□□□□ -0.29
SPIRE1-211ENST00000498803 EIF4G3O43432 1585 aaKnown RBP13.23□□□□□ -0.29
SPIRE1-211ENST00000498803 ADAMTS12P58397 1594 aa13.22□□□□□ -0.29
SPIRE1-211ENST00000498803 VPS8Q8N3P4 1428 aa13.22□□□□□ -0.29
SPIRE1-211ENST00000498803 SNAPC4Q5SXM2 1469 aa13.18□□□□□ -0.3
SPIRE1-211ENST00000498803 RANGAP1P46060 587 aaPredicted RBP13.17□□□□□ -0.3
SPIRE1-211ENST00000498803 APLP2Q06481 763 aa13.17□□□□□ -0.3
SPIRE1-211ENST00000498803 EFCAB5A4FU69 1503 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms