RNA–Protein interactions for RNA: ENST00000498574.1

IGKV1-39-201, Transcript of immunoglobulin kappa variable 1-39 (gene/pseudogene), humanhuman

APPRIS P1 BASIC

Gene IGKV1-39, Length 398 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1-39-201ENST00000498574 NISCHQ9Y2I1 1504 aa20.86■□□□□ 0.93
IGKV1-39-201ENST00000498574 ABCC9O60706 1549 aa20.05■□□□□ 0.8
IGKV1-39-201ENST00000498574 DNAJC5BQ9UF47 199 aa19.7■□□□□ 0.74
IGKV1-39-201ENST00000498574 CCDC180Q9P1Z9 1646 aa18.99■□□□□ 0.63
IGKV1-39-201ENST00000498574 DNAJC5Q9H3Z4 198 aa18.77■□□□□ 0.6
IGKV1-39-201ENST00000498574 PABPN1Q86U42 306 aaKnown RBP eCLIP18.62■□□□□ 0.57
IGKV1-39-201ENST00000498574 RB1CC1Q8TDY2 1594 aa18.61■□□□□ 0.57
IGKV1-39-201ENST00000498574 NACADO15069 1562 aa18.27■□□□□ 0.52
IGKV1-39-201ENST00000498574 DCAF8L2P0C7V8 631 aa18.2■□□□□ 0.5
IGKV1-39-201ENST00000498574 CECR2Q9BXF3 1484 aa18.16■□□□□ 0.5
IGKV1-39-201ENST00000498574 BICRAQ9NZM4 1560 aa18.08■□□□□ 0.49
IGKV1-39-201ENST00000498574 UNC13AQ9UPW8 1703 aa18.03■□□□□ 0.48
IGKV1-39-201ENST00000498574 CC2D2AQ9P2K1 1620 aa17.99■□□□□ 0.47
IGKV1-39-201ENST00000498574 SHROOM4Q9ULL8 1493 aa17.75■□□□□ 0.43
IGKV1-39-201ENST00000498574 EIF4G1Q04637 1599 aaKnown RBP17.73■□□□□ 0.43
IGKV1-39-201ENST00000498574 MYO15BQ96JP2 1530 aa17.7■□□□□ 0.42
IGKV1-39-201ENST00000498574 CUX2O14529 1486 aa17.63■□□□□ 0.41
IGKV1-39-201ENST00000498574 TRIM41Q8WV44 630 aa17.59■□□□□ 0.41
IGKV1-39-201ENST00000498574 ERCC6Q03468 1493 aa17.39■□□□□ 0.37
IGKV1-39-201ENST00000498574 SCRIBQ14160 1630 aa17.36■□□□□ 0.37
IGKV1-39-201ENST00000498574 DCAF1Q9Y4B6 1507 aa17.13■□□□□ 0.33
IGKV1-39-201ENST00000498574 ZCCHC6Q5VYS8 1495 aaKnown RBP17.05■□□□□ 0.32
IGKV1-39-201ENST00000498574 NESP48681 1621 aa16.95■□□□□ 0.3
IGKV1-39-201ENST00000498574 NCAPD3P42695 1498 aa16.93■□□□□ 0.3
IGKV1-39-201ENST00000498574 THOC2Q8NI27 1593 aaKnown RBP16.85■□□□□ 0.29
IGKV1-39-201ENST00000498574 AEBP2Q6ZN18 517 aaPredicted RBP16.8■□□□□ 0.28
IGKV1-39-201ENST00000498574 OSCARQ8IYS5 282 aa16.79■□□□□ 0.28
IGKV1-39-201ENST00000498574 ATAD2BQ9ULI0 1458 aa16.74■□□□□ 0.27
IGKV1-39-201ENST00000498574 SMARCA2P51531 1590 aa16.74■□□□□ 0.27
IGKV1-39-201ENST00000498574 PDS5BQ9NTI5 1447 aa16.66■□□□□ 0.26
IGKV1-39-201ENST00000498574 HMGXB3Q12766 1538 aa16.64■□□□□ 0.25
IGKV1-39-201ENST00000498574 BAZ1AQ9NRL2 1556 aaPredicted RBP16.62■□□□□ 0.25
IGKV1-39-201ENST00000498574 LAMC3Q9Y6N6 1575 aa16.62■□□□□ 0.25
IGKV1-39-201ENST00000498574 TRHP20396 242 aaPredicted RBP16.6■□□□□ 0.25
IGKV1-39-201ENST00000498574 KIF21AQ7Z4S6 1674 aa16.57■□□□□ 0.24
IGKV1-39-201ENST00000498574 MRC2Q9UBG0 1479 aa16.52■□□□□ 0.23
IGKV1-39-201ENST00000498574 BAZ1BQ9UIG0 1483 aaKnown RBP16.52■□□□□ 0.23
IGKV1-39-201ENST00000498574 RIMBP3CA6NJZ7 1639 aa16.5■□□□□ 0.23
IGKV1-39-201ENST00000498574 RIMBP3BA6NNM3 1639 aa16.5■□□□□ 0.23
IGKV1-39-201ENST00000498574 RIMBP3Q9UFD9 1639 aa16.5■□□□□ 0.23
IGKV1-39-201ENST00000498574 CYB5RLQ6IPT4 315 aa16.48■□□□□ 0.23
IGKV1-39-201ENST00000498574 WDR62O43379 1518 aa16.46■□□□□ 0.23
IGKV1-39-201ENST00000498574 SMARCA4P51532 1647 aa16.41■□□□□ 0.22
IGKV1-39-201ENST00000498574 ARHGEF11O15085 1522 aa16.4■□□□□ 0.22
IGKV1-39-201ENST00000498574 CADPSQ9ULU8 1353 aa16.4■□□□□ 0.22
IGKV1-39-201ENST00000498574 CEP164Q9UPV0 1460 aa16.27■□□□□ 0.19
IGKV1-39-201ENST00000498574 PEG3Q9GZU2 1588 aa16.25■□□□□ 0.19
IGKV1-39-201ENST00000498574 ILDR1Q86SU0 546 aaPredicted RBP16.21■□□□□ 0.19
IGKV1-39-201ENST00000498574 ARAP1Q96P48 1450 aa16.18■□□□□ 0.18
IGKV1-39-201ENST00000498574 FANCD2Q9BXW9 1451 aa16.18■□□□□ 0.18
IGKV1-39-201ENST00000498574 URB2Q14146 1524 aaKnown RBP16.09■□□□□ 0.17
IGKV1-39-201ENST00000498574 MROH2BQ7Z745 1585 aa16.07■□□□□ 0.16
IGKV1-39-201ENST00000498574 ZNF608Q9ULD9 1512 aaPredicted RBP16.06■□□□□ 0.16
IGKV1-39-201ENST00000498574 RSF1Q96T23 1441 aaPredicted RBP16.02■□□□□ 0.16
IGKV1-39-201ENST00000498574 FBLN2P98095 1184 aa16.01■□□□□ 0.15
IGKV1-39-201ENST00000498574 IFT140Q96RY7 1462 aa15.99■□□□□ 0.15
IGKV1-39-201ENST00000498574 CFTRP13569 1480 aa15.98■□□□□ 0.15
IGKV1-39-201ENST00000498574 CHD1O14646 1710 aa15.85■□□□□ 0.13
IGKV1-39-201ENST00000498574 AQRO60306 1485 aaKnown RBP eCLIP15.84■□□□□ 0.13
IGKV1-39-201ENST00000498574 EIF4G3O43432 1585 aaKnown RBP15.83■□□□□ 0.13
IGKV1-39-201ENST00000498574 WIZO95785 1651 aa15.78■□□□□ 0.12
IGKV1-39-201ENST00000498574 TOPBP1Q92547 1522 aa15.75■□□□□ 0.11
IGKV1-39-201ENST00000498574 KDM4FA0A1W2PPD8 638 aa15.74■□□□□ 0.11
IGKV1-39-201ENST00000498574 CHMP7Q8WUX9 453 aaPredicted RBP15.72■□□□□ 0.11
IGKV1-39-201ENST00000498574 CLASP1Q7Z460 1538 aa15.71■□□□□ 0.11
IGKV1-39-201ENST00000498574 GAPVD1Q14C86 1478 aa15.7■□□□□ 0.1
IGKV1-39-201ENST00000498574 ABCC8Q09428 1581 aa15.67■□□□□ 0.1
IGKV1-39-201ENST00000498574 SYNJ1O43426 1573 aa15.64■□□□□ 0.09
IGKV1-39-201ENST00000498574 TARBP1Q13395 1621 aaKnown RBP15.63■□□□□ 0.09
IGKV1-39-201ENST00000498574 TDRD9Q8NDG6 1382 aaKnown RBP15.62■□□□□ 0.09
IGKV1-39-201ENST00000498574 SNAPC4Q5SXM2 1469 aa15.6■□□□□ 0.09
IGKV1-39-201ENST00000498574 DNMBPQ6XZF7 1577 aa15.58■□□□□ 0.08
IGKV1-39-201ENST00000498574 POLA1P09884 1462 aaPredicted RBP15.54■□□□□ 0.08
IGKV1-39-201ENST00000498574 RAD54L2Q9Y4B4 1467 aa15.53■□□□□ 0.08
IGKV1-39-201ENST00000498574 PRDM2Q13029 1718 aa15.53■□□□□ 0.08
IGKV1-39-201ENST00000498574 TOP2AP11388 1531 aaKnown RBP15.53■□□□□ 0.08
IGKV1-39-201ENST00000498574 SOGA1O94964 1423 aa15.51■□□□□ 0.07
IGKV1-39-201ENST00000498574 MAGI1Q96QZ7 1491 aaPredicted RBP15.51■□□□□ 0.07
IGKV1-39-201ENST00000498574 FAM69CQ0P6D2 419 aa15.5■□□□□ 0.07
IGKV1-39-201ENST00000498574 SYNJ2O15056 1496 aa15.49■□□□□ 0.07
IGKV1-39-201ENST00000498574 FBXO41Q8TF61 875 aa15.49■□□□□ 0.07
IGKV1-39-201ENST00000498574 GRIN2BQ13224 1484 aa15.45■□□□□ 0.06
IGKV1-39-201ENST00000498574 KIF13AQ9H1H9 1805 aa15.44■□□□□ 0.06
IGKV1-39-201ENST00000498574 CCDC88BA6NC98 1476 aa15.43■□□□□ 0.06
IGKV1-39-201ENST00000498574 ERCC6L2Q5T890 1561 aa15.42■□□□□ 0.06
IGKV1-39-201ENST00000498574 WDR97A6NE52 1622 aa15.38■□□□□ 0.05
IGKV1-39-201ENST00000498574 ABCC10Q5T3U5 1492 aa15.37■□□□□ 0.05
IGKV1-39-201ENST00000498574 HECW2Q9P2P5 1572 aa15.36■□□□□ 0.05
IGKV1-39-201ENST00000498574 KDM6BO15054 1643 aa15.36■□□□□ 0.05
IGKV1-39-201ENST00000498574 NPM1P06748 294 aaKnown RBP eCLIP15.36■□□□□ 0.05
IGKV1-39-201ENST00000498574 LMTK3Q96Q04 1460 aa15.33■□□□□ 0.05
IGKV1-39-201ENST00000498574 ADGRL1O94910 1474 aa15.32■□□□□ 0.04
IGKV1-39-201ENST00000498574 FGD5Q6ZNL6 1462 aa15.31■□□□□ 0.04
IGKV1-39-201ENST00000498574 CEP170Q5SW79 1584 aa15.31■□□□□ 0.04
IGKV1-39-201ENST00000498574 SOCS7O14512 581 aa15.26■□□□□ 0.03
IGKV1-39-201ENST00000498574 DIP2BQ9P265 1576 aa15.23■□□□□ 0.03
IGKV1-39-201ENST00000498574 GRIN2AQ12879 1464 aa15.22■□□□□ 0.03
IGKV1-39-201ENST00000498574 MAPKBP1O60336 1514 aa15.22■□□□□ 0.03
IGKV1-39-201ENST00000498574 NUP160Q12769 1436 aa15.21■□□□□ 0.03
IGKV1-39-201ENST00000498574 PRG4Q92954 1404 aaPredicted RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms