RNA–Protein interactions for RNA: ENST00000497742.6

NICN1-207, Transcript of nicolin 1, humanhuman

TSL 5

Gene NICN1, Length 1,743 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1-207ENST00000497742 NISCHQ9Y2I1 1504 aa26.21■■□□□ 1.79
NICN1-207ENST00000497742 CCDC180Q9P1Z9 1646 aa23.21■■□□□ 1.31
NICN1-207ENST00000497742 ABCC9O60706 1549 aa22.51■■□□□ 1.19
NICN1-207ENST00000497742 ZCCHC6Q5VYS8 1495 aaKnown RBP21.89■■□□□ 1.09
NICN1-207ENST00000497742 NACADO15069 1562 aa21.79■■□□□ 1.08
NICN1-207ENST00000497742 DCAF8L2P0C7V8 631 aa21.77■■□□□ 1.08
NICN1-207ENST00000497742 MYO15BQ96JP2 1530 aa21.75■■□□□ 1.07
NICN1-207ENST00000497742 RB1CC1Q8TDY2 1594 aa21.75■■□□□ 1.07
NICN1-207ENST00000497742 DCAF1Q9Y4B6 1507 aa21.72■■□□□ 1.07
NICN1-207ENST00000497742 UNC13AQ9UPW8 1703 aa21.24■□□□□ 0.99
NICN1-207ENST00000497742 SCRIBQ14160 1630 aa21.17■□□□□ 0.98
NICN1-207ENST00000497742 BICRAQ9NZM4 1560 aa21.1■□□□□ 0.97
NICN1-207ENST00000497742 PABPN1Q86U42 306 aaKnown RBP eCLIP21.07■□□□□ 0.96
NICN1-207ENST00000497742 SHROOM4Q9ULL8 1493 aa20.92■□□□□ 0.94
NICN1-207ENST00000497742 EIF4G1Q04637 1599 aaKnown RBP20.52■□□□□ 0.88
NICN1-207ENST00000497742 DNAJC5BQ9UF47 199 aa20.5■□□□□ 0.87
NICN1-207ENST00000497742 CECR2Q9BXF3 1484 aa20.39■□□□□ 0.86
NICN1-207ENST00000497742 CC2D2AQ9P2K1 1620 aa20.38■□□□□ 0.85
NICN1-207ENST00000497742 BAZ1AQ9NRL2 1556 aaPredicted RBP20.3■□□□□ 0.84
NICN1-207ENST00000497742 SMARCA4P51532 1647 aa20.29■□□□□ 0.84
NICN1-207ENST00000497742 MROH2BQ7Z745 1585 aa20.2■□□□□ 0.82
NICN1-207ENST00000497742 ATAD2BQ9ULI0 1458 aa20.14■□□□□ 0.82
NICN1-207ENST00000497742 SMARCA2P51531 1590 aa20.12■□□□□ 0.81
NICN1-207ENST00000497742 NCAPD3P42695 1498 aa20.11■□□□□ 0.81
NICN1-207ENST00000497742 PEG3Q9GZU2 1588 aa20.11■□□□□ 0.81
NICN1-207ENST00000497742 RSF1Q96T23 1441 aaPredicted RBP20.05■□□□□ 0.8
NICN1-207ENST00000497742 HMGXB3Q12766 1538 aa20.03■□□□□ 0.8
NICN1-207ENST00000497742 BAZ1BQ9UIG0 1483 aaKnown RBP19.97■□□□□ 0.79
NICN1-207ENST00000497742 WIZO95785 1651 aa19.97■□□□□ 0.79
NICN1-207ENST00000497742 TOP2AP11388 1531 aaKnown RBP19.79■□□□□ 0.76
NICN1-207ENST00000497742 SUPT5HO00267 1087 aaKnown RBP19.64■□□□□ 0.73
NICN1-207ENST00000497742 CCDC88BA6NC98 1476 aa19.55■□□□□ 0.72
NICN1-207ENST00000497742 NESP48681 1621 aa19.54■□□□□ 0.72
NICN1-207ENST00000497742 LAMC3Q9Y6N6 1575 aa19.54■□□□□ 0.72
NICN1-207ENST00000497742 CADPSQ9ULU8 1353 aa19.53■□□□□ 0.72
NICN1-207ENST00000497742 CFTRP13569 1480 aa19.46■□□□□ 0.71
NICN1-207ENST00000497742 PDS5BQ9NTI5 1447 aa19.4■□□□□ 0.7
NICN1-207ENST00000497742 ERCC6Q03468 1493 aa19.38■□□□□ 0.69
NICN1-207ENST00000497742 KIF21AQ7Z4S6 1674 aa19.3■□□□□ 0.68
NICN1-207ENST00000497742 FANCD2Q9BXW9 1451 aa19.3■□□□□ 0.68
NICN1-207ENST00000497742 PRDM2Q13029 1718 aa19.28■□□□□ 0.68
NICN1-207ENST00000497742 CEP164Q9UPV0 1460 aa19.25■□□□□ 0.67
NICN1-207ENST00000497742 THOC2Q8NI27 1593 aaKnown RBP19.22■□□□□ 0.67
NICN1-207ENST00000497742 MRC2Q9UBG0 1479 aa19.19■□□□□ 0.66
NICN1-207ENST00000497742 CUX2O14529 1486 aa19.14■□□□□ 0.65
NICN1-207ENST00000497742 WDR62O43379 1518 aa19.12■□□□□ 0.65
NICN1-207ENST00000497742 URB2Q14146 1524 aaKnown RBP19.1■□□□□ 0.65
NICN1-207ENST00000497742 ABCC8Q09428 1581 aa19.02■□□□□ 0.64
NICN1-207ENST00000497742 TOPBP1Q92547 1522 aa19.01■□□□□ 0.63
NICN1-207ENST00000497742 DNMBPQ6XZF7 1577 aa19■□□□□ 0.63
NICN1-207ENST00000497742 CUX1P39880 1505 aa18.94■□□□□ 0.62
NICN1-207ENST00000497742 WRNQ14191 1432 aaPredicted RBP eCLIP18.89■□□□□ 0.61
NICN1-207ENST00000497742 POLA1P09884 1462 aaPredicted RBP18.87■□□□□ 0.61
NICN1-207ENST00000497742 IFT140Q96RY7 1462 aa18.85■□□□□ 0.61
NICN1-207ENST00000497742 FGD5Q6ZNL6 1462 aa18.84■□□□□ 0.61
NICN1-207ENST00000497742 TOP2BQ02880 1626 aa18.82■□□□□ 0.6
NICN1-207ENST00000497742 SYNJ1O43426 1573 aa18.82■□□□□ 0.6
NICN1-207ENST00000497742 BIVM-ERCC5R4GMW8 1640 aa18.82■□□□□ 0.6
NICN1-207ENST00000497742 TARBP1Q13395 1621 aaKnown RBP18.79■□□□□ 0.6
NICN1-207ENST00000497742 SOGA1O94964 1423 aa18.78■□□□□ 0.6
NICN1-207ENST00000497742 RAD54L2Q9Y4B4 1467 aa18.76■□□□□ 0.59
NICN1-207ENST00000497742 ZNF608Q9ULD9 1512 aaPredicted RBP18.74■□□□□ 0.59
NICN1-207ENST00000497742 ABCA10Q8WWZ4 1543 aa18.68■□□□□ 0.58
NICN1-207ENST00000497742 WDR97A6NE52 1622 aa18.67■□□□□ 0.58
NICN1-207ENST00000497742 EIF4G3O43432 1585 aaKnown RBP18.67■□□□□ 0.58
NICN1-207ENST00000497742 AQRO60306 1485 aaKnown RBP eCLIP18.65■□□□□ 0.583e-7■■■□□ 17
NICN1-207ENST00000497742 TDRD9Q8NDG6 1382 aaKnown RBP18.65■□□□□ 0.58
NICN1-207ENST00000497742 ABCA5Q8WWZ7 1642 aa18.58■□□□□ 0.57
NICN1-207ENST00000497742 GAPVD1Q14C86 1478 aa18.57■□□□□ 0.56
NICN1-207ENST00000497742 TRIM41Q8WV44 630 aa18.55■□□□□ 0.56
NICN1-207ENST00000497742 GRIN2BQ13224 1484 aa18.55■□□□□ 0.56
NICN1-207ENST00000497742 PBRM1Q86U86 1689 aa18.49■□□□□ 0.55
NICN1-207ENST00000497742 SNAPC4Q5SXM2 1469 aa18.49■□□□□ 0.55
NICN1-207ENST00000497742 MAGI1Q96QZ7 1491 aaPredicted RBP18.49■□□□□ 0.55
NICN1-207ENST00000497742 KIF27Q86VH2 1401 aa18.48■□□□□ 0.55
NICN1-207ENST00000497742 CHIC1Q5VXU3 224 aa18.46■□□□□ 0.55
NICN1-207ENST00000497742 ERICH3Q5RHP9 1530 aa18.46■□□□□ 0.55
NICN1-207ENST00000497742 SYNJ2O15056 1496 aa18.41■□□□□ 0.54
NICN1-207ENST00000497742 IGF1RP08069 1367 aa18.39■□□□□ 0.53
NICN1-207ENST00000497742 ADAMTS12P58397 1594 aa18.39■□□□□ 0.53
NICN1-207ENST00000497742 CHD1O14646 1710 aa18.37■□□□□ 0.53
NICN1-207ENST00000497742 FHAD1B1AJZ9 1412 aa18.37■□□□□ 0.53
NICN1-207ENST00000497742 FBLN2P98095 1184 aa18.37■□□□□ 0.53
NICN1-207ENST00000497742 OSCARQ8IYS5 282 aa18.37■□□□□ 0.53
NICN1-207ENST00000497742 CHMP7Q8WUX9 453 aaPredicted RBP18.36■□□□□ 0.53
NICN1-207ENST00000497742 RUSC2Q8N2Y8 1516 aa18.36■□□□□ 0.53
NICN1-207ENST00000497742 DNAJC5Q9H3Z4 198 aa18.32■□□□□ 0.52
NICN1-207ENST00000497742 CUL7Q14999 1698 aa18.31■□□□□ 0.52
NICN1-207ENST00000497742 GRIN2AQ12879 1464 aa18.31■□□□□ 0.52
NICN1-207ENST00000497742 CARMIL1Q5VZK9 1371 aa18.28■□□□□ 0.52
NICN1-207ENST00000497742 EEA1Q15075 1411 aa18.26■□□□□ 0.51
NICN1-207ENST00000497742 NUP160Q12769 1436 aa18.24■□□□□ 0.51
NICN1-207ENST00000497742 CLASP1Q7Z460 1538 aa18.21■□□□□ 0.51
NICN1-207ENST00000497742 CEP170Q5SW79 1584 aa18.2■□□□□ 0.5
NICN1-207ENST00000497742 CSRNP3Q8WYN3 585 aa18.19■□□□□ 0.5
NICN1-207ENST00000497742 PRXQ9BXM0 1461 aa18.19■□□□□ 0.5
NICN1-207ENST00000497742 RAPGEF2Q9Y4G8 1499 aa18.18■□□□□ 0.5
NICN1-207ENST00000497742 FAM9AQ8IZU1 332 aaPredicted RBP18.14■□□□□ 0.49
NICN1-207ENST00000497742 KIAA0586Q9BVV6 1533 aa18.1■□□□□ 0.49
NICN1-207ENST00000497742 ARHGEF11O15085 1522 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms