RNA–Protein interactions for RNA: ENST00000496974.3

RN7SL649P-201, Transcript of RNA, 7SL, cytoplasmic 649, pseudogene, humanhuman

BASIC

Gene RN7SL649P, Length 275 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL649P-201ENST00000496974 NISCHQ9Y2I1 1504 aa16.98■□□□□ 0.31
RN7SL649P-201ENST00000496974 ABCC9O60706 1549 aa16.4■□□□□ 0.22
RN7SL649P-201ENST00000496974 DNAJC5BQ9UF47 199 aa16.08■□□□□ 0.16
RN7SL649P-201ENST00000496974 CCDC180Q9P1Z9 1646 aa15.5■□□□□ 0.07
RN7SL649P-201ENST00000496974 DNAJC5Q9H3Z4 198 aa15.49■□□□□ 0.07
RN7SL649P-201ENST00000496974 RB1CC1Q8TDY2 1594 aa15.25■□□□□ 0.03
RN7SL649P-201ENST00000496974 PABPN1Q86U42 306 aaKnown RBP eCLIP15.21■□□□□ 0.03
RN7SL649P-201ENST00000496974 NACADO15069 1562 aa14.96□□□□□ -0.01
RN7SL649P-201ENST00000496974 CECR2Q9BXF3 1484 aa14.9□□□□□ -0.02
RN7SL649P-201ENST00000496974 DCAF8L2P0C7V8 631 aa14.9□□□□□ -0.02
RN7SL649P-201ENST00000496974 CC2D2AQ9P2K1 1620 aa14.7□□□□□ -0.06
RN7SL649P-201ENST00000496974 BICRAQ9NZM4 1560 aa14.69□□□□□ -0.06
RN7SL649P-201ENST00000496974 SHROOM4Q9ULL8 1493 aa14.61□□□□□ -0.07
RN7SL649P-201ENST00000496974 UNC13AQ9UPW8 1703 aa14.59□□□□□ -0.07
RN7SL649P-201ENST00000496974 CUX2O14529 1486 aa14.52□□□□□ -0.08
RN7SL649P-201ENST00000496974 TRIM41Q8WV44 630 aa14.51□□□□□ -0.09
RN7SL649P-201ENST00000496974 EIF4G1Q04637 1599 aaKnown RBP14.49□□□□□ -0.09
RN7SL649P-201ENST00000496974 MYO15BQ96JP2 1530 aa14.49□□□□□ -0.09
RN7SL649P-201ENST00000496974 ERCC6Q03468 1493 aa14.31□□□□□ -0.12
RN7SL649P-201ENST00000496974 SCRIBQ14160 1630 aa14.16□□□□□ -0.14
RN7SL649P-201ENST00000496974 DCAF1Q9Y4B6 1507 aa13.99□□□□□ -0.17
RN7SL649P-201ENST00000496974 AEBP2Q6ZN18 517 aaPredicted RBP13.98□□□□□ -0.17
RN7SL649P-201ENST00000496974 ZCCHC6Q5VYS8 1495 aaKnown RBP13.87□□□□□ -0.19
RN7SL649P-201ENST00000496974 NCAPD3P42695 1498 aa13.86□□□□□ -0.19
RN7SL649P-201ENST00000496974 OSCARQ8IYS5 282 aa13.84□□□□□ -0.19
RN7SL649P-201ENST00000496974 NESP48681 1621 aa13.79□□□□□ -0.2
RN7SL649P-201ENST00000496974 THOC2Q8NI27 1593 aaKnown RBP13.75□□□□□ -0.21
RN7SL649P-201ENST00000496974 TRHP20396 242 aaPredicted RBP13.71□□□□□ -0.21
RN7SL649P-201ENST00000496974 PDS5BQ9NTI5 1447 aa13.71□□□□□ -0.22
RN7SL649P-201ENST00000496974 SMARCA2P51531 1590 aa13.68□□□□□ -0.22
RN7SL649P-201ENST00000496974 ATAD2BQ9ULI0 1458 aa13.67□□□□□ -0.22
RN7SL649P-201ENST00000496974 BAZ1AQ9NRL2 1556 aaPredicted RBP13.62□□□□□ -0.23
RN7SL649P-201ENST00000496974 LAMC3Q9Y6N6 1575 aa13.62□□□□□ -0.23
RN7SL649P-201ENST00000496974 HMGXB3Q12766 1538 aa13.6□□□□□ -0.23
RN7SL649P-201ENST00000496974 CYB5RLQ6IPT4 315 aa13.55□□□□□ -0.24
RN7SL649P-201ENST00000496974 MRC2Q9UBG0 1479 aa13.54□□□□□ -0.24
RN7SL649P-201ENST00000496974 BAZ1BQ9UIG0 1483 aaKnown RBP13.51□□□□□ -0.25
RN7SL649P-201ENST00000496974 RIMBP3CA6NJZ7 1639 aa13.5□□□□□ -0.25
RN7SL649P-201ENST00000496974 RIMBP3BA6NNM3 1639 aa13.5□□□□□ -0.25
RN7SL649P-201ENST00000496974 RIMBP3Q9UFD9 1639 aa13.5□□□□□ -0.25
RN7SL649P-201ENST00000496974 WDR62O43379 1518 aa13.47□□□□□ -0.25
RN7SL649P-201ENST00000496974 KIF21AQ7Z4S6 1674 aa13.47□□□□□ -0.25
RN7SL649P-201ENST00000496974 ARHGEF11O15085 1522 aa13.44□□□□□ -0.26
RN7SL649P-201ENST00000496974 CADPSQ9ULU8 1353 aa13.44□□□□□ -0.26
RN7SL649P-201ENST00000496974 ILDR1Q86SU0 546 aaPredicted RBP13.38□□□□□ -0.27
RN7SL649P-201ENST00000496974 SMARCA4P51532 1647 aa13.35□□□□□ -0.27
RN7SL649P-201ENST00000496974 CEP164Q9UPV0 1460 aa13.34□□□□□ -0.27
RN7SL649P-201ENST00000496974 PEG3Q9GZU2 1588 aa13.24□□□□□ -0.29
RN7SL649P-201ENST00000496974 ARAP1Q96P48 1450 aa13.23□□□□□ -0.29
RN7SL649P-201ENST00000496974 FANCD2Q9BXW9 1451 aa13.23□□□□□ -0.29
RN7SL649P-201ENST00000496974 RSF1Q96T23 1441 aaPredicted RBP13.19□□□□□ -0.3
RN7SL649P-201ENST00000496974 FBLN2P98095 1184 aa13.15□□□□□ -0.3
RN7SL649P-201ENST00000496974 IFT140Q96RY7 1462 aa13.12□□□□□ -0.31
RN7SL649P-201ENST00000496974 URB2Q14146 1524 aaKnown RBP13.1□□□□□ -0.31
RN7SL649P-201ENST00000496974 ZNF608Q9ULD9 1512 aaPredicted RBP13.08□□□□□ -0.31
RN7SL649P-201ENST00000496974 CFTRP13569 1480 aa13.05□□□□□ -0.32
RN7SL649P-201ENST00000496974 MROH2BQ7Z745 1585 aa13.03□□□□□ -0.32
RN7SL649P-201ENST00000496974 AQRO60306 1485 aaKnown RBP eCLIP12.92□□□□□ -0.34
RN7SL649P-201ENST00000496974 EIF4G3O43432 1585 aaKnown RBP12.92□□□□□ -0.34
RN7SL649P-201ENST00000496974 CHMP7Q8WUX9 453 aaPredicted RBP12.92□□□□□ -0.34
RN7SL649P-201ENST00000496974 KDM4FA0A1W2PPD8 638 aa12.9□□□□□ -0.34
RN7SL649P-201ENST00000496974 ABCC8Q09428 1581 aa12.89□□□□□ -0.35
RN7SL649P-201ENST00000496974 CHD1O14646 1710 aa12.88□□□□□ -0.35
RN7SL649P-201ENST00000496974 GAPVD1Q14C86 1478 aa12.87□□□□□ -0.35
RN7SL649P-201ENST00000496974 TOPBP1Q92547 1522 aa12.85□□□□□ -0.35
RN7SL649P-201ENST00000496974 FBXO41Q8TF61 875 aa12.84□□□□□ -0.35
RN7SL649P-201ENST00000496974 SYNJ1O43426 1573 aa12.84□□□□□ -0.35
RN7SL649P-201ENST00000496974 CLASP1Q7Z460 1538 aa12.83□□□□□ -0.36
RN7SL649P-201ENST00000496974 WIZO95785 1651 aa12.77□□□□□ -0.37
RN7SL649P-201ENST00000496974 FAM69CQ0P6D2 419 aa12.75□□□□□ -0.37
RN7SL649P-201ENST00000496974 SNAPC4Q5SXM2 1469 aa12.75□□□□□ -0.37
RN7SL649P-201ENST00000496974 TDRD9Q8NDG6 1382 aaKnown RBP12.75□□□□□ -0.37
RN7SL649P-201ENST00000496974 ERCC6L2Q5T890 1561 aa12.73□□□□□ -0.37
RN7SL649P-201ENST00000496974 DNMBPQ6XZF7 1577 aa12.72□□□□□ -0.37
RN7SL649P-201ENST00000496974 LMTK3Q96Q04 1460 aa12.72□□□□□ -0.37
RN7SL649P-201ENST00000496974 MAGI1Q96QZ7 1491 aaPredicted RBP12.72□□□□□ -0.37
RN7SL649P-201ENST00000496974 NPM1P06748 294 aaKnown RBP eCLIP12.71□□□□□ -0.37
RN7SL649P-201ENST00000496974 TARBP1Q13395 1621 aaKnown RBP12.7□□□□□ -0.38
RN7SL649P-201ENST00000496974 SOGA1O94964 1423 aa12.7□□□□□ -0.38
RN7SL649P-201ENST00000496974 SYNJ2O15056 1496 aa12.69□□□□□ -0.38
RN7SL649P-201ENST00000496974 POLA1P09884 1462 aaPredicted RBP12.67□□□□□ -0.38
RN7SL649P-201ENST00000496974 SOCS7O14512 581 aa12.66□□□□□ -0.38
RN7SL649P-201ENST00000496974 GRIN2BQ13224 1484 aa12.65□□□□□ -0.38
RN7SL649P-201ENST00000496974 TOP2AP11388 1531 aaKnown RBP12.64□□□□□ -0.39
RN7SL649P-201ENST00000496974 RAD54L2Q9Y4B4 1467 aa12.64□□□□□ -0.39
RN7SL649P-201ENST00000496974 WDR97A6NE52 1622 aa12.62□□□□□ -0.39
RN7SL649P-201ENST00000496974 ABCC10Q5T3U5 1492 aa12.62□□□□□ -0.39
RN7SL649P-201ENST00000496974 KDM6BO15054 1643 aa12.62□□□□□ -0.39
RN7SL649P-201ENST00000496974 HECW2Q9P2P5 1572 aa12.61□□□□□ -0.39
RN7SL649P-201ENST00000496974 PRDM2Q13029 1718 aa12.6□□□□□ -0.39
RN7SL649P-201ENST00000496974 ADGRL1O94910 1474 aa12.58□□□□□ -0.4
RN7SL649P-201ENST00000496974 KIF13AQ9H1H9 1805 aa12.55□□□□□ -0.4
RN7SL649P-201ENST00000496974 CCDC88BA6NC98 1476 aa12.54□□□□□ -0.4
RN7SL649P-201ENST00000496974 DISP3Q9P2K9 1392 aa12.5□□□□□ -0.41
RN7SL649P-201ENST00000496974 CEP170Q5SW79 1584 aa12.48□□□□□ -0.41
RN7SL649P-201ENST00000496974 FGD5Q6ZNL6 1462 aa12.48□□□□□ -0.41
RN7SL649P-201ENST00000496974 MAPKBP1O60336 1514 aa12.47□□□□□ -0.41
RN7SL649P-201ENST00000496974 ILDR2Q71H61 639 aa12.47□□□□□ -0.41
RN7SL649P-201ENST00000496974 DIP2BQ9P265 1576 aa12.45□□□□□ -0.42
RN7SL649P-201ENST00000496974 GRIN2AQ12879 1464 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms