RNA–Protein interactions for RNA: ENST00000496583.1

TSEN34-207, Transcript of tRNA splicing endonuclease subunit 34, humanhuman

TSL 2

Gene TSEN34, Length 2,372 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN34-207ENST00000496583 NISCHQ9Y2I1 1504 aa48.19■■■■■ 5.31
TSEN34-207ENST00000496583 CCDC180Q9P1Z9 1646 aa41.33■■■■■ 4.21
TSEN34-207ENST00000496583 ZCCHC6Q5VYS8 1495 aaKnown RBP40.67■■■■■ 4.1
TSEN34-207ENST00000496583 SHROOM4Q9ULL8 1493 aa40.52■■■■■ 4.08
TSEN34-207ENST00000496583 DCAF8L2P0C7V8 631 aa39.88■■■■□ 3.97
TSEN34-207ENST00000496583 DCAF1Q9Y4B6 1507 aa39.62■■■■□ 3.93
TSEN34-207ENST00000496583 SUPT5HO00267 1087 aaKnown RBP39.48■■■■□ 3.91
TSEN34-207ENST00000496583 MYO15BQ96JP2 1530 aa38.68■■■■□ 3.78
TSEN34-207ENST00000496583 ABCC9O60706 1549 aa38.53■■■■□ 3.76
TSEN34-207ENST00000496583 SCRIBQ14160 1630 aa38.52■■■■□ 3.76
TSEN34-207ENST00000496583 NACADO15069 1562 aa38.27■■■■□ 3.72
TSEN34-207ENST00000496583 CHIC1Q5VXU3 224 aa38.21■■■■□ 3.71
TSEN34-207ENST00000496583 RSF1Q96T23 1441 aaPredicted RBP37.89■■■■□ 3.66
TSEN34-207ENST00000496583 RB1CC1Q8TDY2 1594 aa37.74■■■■□ 3.63
TSEN34-207ENST00000496583 CECR2Q9BXF3 1484 aa37.57■■■■□ 3.61
TSEN34-207ENST00000496583 MROH2BQ7Z745 1585 aa37.41■■■■□ 3.58
TSEN34-207ENST00000496583 UNC13AQ9UPW8 1703 aa37.28■■■■□ 3.56
TSEN34-207ENST00000496583 WIZO95785 1651 aa37.22■■■■□ 3.55
TSEN34-207ENST00000496583 BAZ1AQ9NRL2 1556 aaPredicted RBP37.06■■■■□ 3.52
TSEN34-207ENST00000496583 LOC105371045A0A1W2PR82 267 aa37.01■■■■□ 3.52
TSEN34-207ENST00000496583 TRIM41Q8WV44 630 aa36.86■■■■□ 3.49
TSEN34-207ENST00000496583 SMARCA4P51532 1647 aa36.84■■■■□ 3.49
TSEN34-207ENST00000496583 BICRAQ9NZM4 1560 aa36.75■■■■□ 3.47
TSEN34-207ENST00000496583 HRCP23327 699 aa36.71■■■■□ 3.47
TSEN34-207ENST00000496583 PABPN1Q86U42 306 aaKnown RBP eCLIP36.68■■■■□ 3.46
TSEN34-207ENST00000496583 TOP2AP11388 1531 aaKnown RBP36.63■■■■□ 3.46
TSEN34-207ENST00000496583 EIF4G1Q04637 1599 aaKnown RBP36.53■■■■□ 3.44
TSEN34-207ENST00000496583 PCGF6Q9BYE7 350 aa36.53■■■■□ 3.44
TSEN34-207ENST00000496583 FAM9AQ8IZU1 332 aaPredicted RBP36.47■■■■□ 3.43
TSEN34-207ENST00000496583 CCDC88BA6NC98 1476 aa36.43■■■■□ 3.42
TSEN34-207ENST00000496583 SMARCA2P51531 1590 aa36.42■■■■□ 3.42
TSEN34-207ENST00000496583 PEG3Q9GZU2 1588 aa36.2■■■■□ 3.39
TSEN34-207ENST00000496583 ABCC8Q09428 1581 aa36.14■■■■□ 3.38
TSEN34-207ENST00000496583 EHMT2Q96KQ7 1210 aa36.11■■■■□ 3.37
TSEN34-207ENST00000496583 PPARGC1BQ86YN6 1023 aaKnown RBP35.98■■■■□ 3.35
TSEN34-207ENST00000496583 ATAD2BQ9ULI0 1458 aa35.97■■■■□ 3.35
TSEN34-207ENST00000496583 TRIM26Q12899 539 aaPredicted RBP35.9■■■■□ 3.34
TSEN34-207ENST00000496583 BAZ1BQ9UIG0 1483 aaKnown RBP35.83■■■■□ 3.33
TSEN34-207ENST00000496583 SOGA1O94964 1423 aa35.67■■■■□ 3.3
TSEN34-207ENST00000496583 WRNQ14191 1432 aaPredicted RBP eCLIP35.6■■■■□ 3.29
TSEN34-207ENST00000496583 RUSC2Q8N2Y8 1516 aa35.54■■■■□ 3.28
TSEN34-207ENST00000496583 SYNJ1O43426 1573 aa35.49■■■■□ 3.27
TSEN34-207ENST00000496583 EEA1Q15075 1411 aa35.46■■■■□ 3.27
TSEN34-207ENST00000496583 CSRNP3Q8WYN3 585 aa35.42■■■■□ 3.26
TSEN34-207ENST00000496583 NCAPD3P42695 1498 aa35.38■■■■□ 3.25
TSEN34-207ENST00000496583 HMGXB3Q12766 1538 aa35.37■■■■□ 3.25
TSEN34-207ENST00000496583 TNIKQ9UKE5 1360 aa35.27■■■■□ 3.24
TSEN34-207ENST00000496583 CEP162Q5TB80 1403 aa35.27■■■■□ 3.24
TSEN34-207ENST00000496583 UBTFP17480 764 aaKnown RBP35.17■■■■□ 3.22
TSEN34-207ENST00000496583 GOLGA3Q08378 1498 aa35.17■■■■□ 3.22
TSEN34-207ENST00000496583 TOP2BQ02880 1626 aa35.13■■■■□ 3.21
TSEN34-207ENST00000496583 KIF21BO75037 1637 aa35.05■■■■□ 3.2
TSEN34-207ENST00000496583 BIVM-ERCC5R4GMW8 1640 aa35.05■■■■□ 3.2
TSEN34-207ENST00000496583 CEP164Q9UPV0 1460 aa35.04■■■■□ 3.2
TSEN34-207ENST00000496583 ZEB1P37275 1124 aaPredicted RBP35■■■■□ 3.19
TSEN34-207ENST00000496583 CFTRP13569 1480 aa34.95■■■■□ 3.19
TSEN34-207ENST00000496583 CUX1P39880 1505 aa34.88■■■■□ 3.17
TSEN34-207ENST00000496583 RAPGEF2Q9Y4G8 1499 aa34.85■■■■□ 3.17
TSEN34-207ENST00000496583 TTBK1Q5TCY1 1321 aaPredicted RBP34.82■■■■□ 3.16
TSEN34-207ENST00000496583 PRDM2Q13029 1718 aa34.8■■■■□ 3.16
TSEN34-207ENST00000496583 CC2D2AQ9P2K1 1620 aa34.79■■■■□ 3.16
TSEN34-207ENST00000496583 CLIP1P30622 1438 aa34.72■■■■□ 3.15
TSEN34-207ENST00000496583 CADPSQ9ULU8 1353 aa34.63■■■■□ 3.13
TSEN34-207ENST00000496583 PRXQ9BXM0 1461 aa34.6■■■■□ 3.13
TSEN34-207ENST00000496583 ERICH3Q5RHP9 1530 aa34.57■■■■□ 3.12
TSEN34-207ENST00000496583 KIF27Q86VH2 1401 aa34.55■■■■□ 3.12
TSEN34-207ENST00000496583 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.54■■■■□ 3.12
TSEN34-207ENST00000496583 RANGAP1P46060 587 aaPredicted RBP34.54■■■■□ 3.12
TSEN34-207ENST00000496583 VPS8Q8N3P4 1428 aa34.52■■■■□ 3.12
TSEN34-207ENST00000496583 CCER1Q8TC90 406 aaPredicted RBP34.41■■■■□ 3.1
TSEN34-207ENST00000496583 CUX2O14529 1486 aa34.32■■■■□ 3.08
TSEN34-207ENST00000496583 FGD5Q6ZNL6 1462 aa34.32■■■■□ 3.08
TSEN34-207ENST00000496583 FANCD2Q9BXW9 1451 aa34.3■■■■□ 3.08
TSEN34-207ENST00000496583 ARAP1Q96P48 1450 aa34.27■■■■□ 3.08
TSEN34-207ENST00000496583 APLP2Q06481 763 aa34.25■■■■□ 3.07
TSEN34-207ENST00000496583 IGF1RP08069 1367 aa34.22■■■■□ 3.07
TSEN34-207ENST00000496583 NESP48681 1621 aa34.21■■■■□ 3.07
TSEN34-207ENST00000496583 DNMBPQ6XZF7 1577 aa34.1■■■■□ 3.05
TSEN34-207ENST00000496583 ARHGAP35Q9NRY4 1499 aa34.06■■■■□ 3.04
TSEN34-207ENST00000496583 HNRNPUL2Q1KMD3 747 aaKnown RBP34.06■■■■□ 3.04
TSEN34-207ENST00000496583 CARMIL1Q5VZK9 1371 aa34.05■■■■□ 3.04
TSEN34-207ENST00000496583 TOPBP1Q92547 1522 aa34.04■■■■□ 3.04
TSEN34-207ENST00000496583 SCAF1Q9H7N4 1312 aaKnown RBP34.04■■■■□ 3.04
TSEN34-207ENST00000496583 RAD54L2Q9Y4B4 1467 aa34.01■■■■□ 3.04
TSEN34-207ENST00000496583 POLA1P09884 1462 aaPredicted RBP33.99■■■■□ 3.03
TSEN34-207ENST00000496583 LAMC3Q9Y6N6 1575 aa33.98■■■■□ 3.03
TSEN34-207ENST00000496583 KANK4Q5T7N3 995 aaPredicted RBP33.94■■■■□ 3.02
TSEN34-207ENST00000496583 DNAJC5BQ9UF47 199 aa33.94■■■■□ 3.02
TSEN34-207ENST00000496583 ABCA10Q8WWZ4 1543 aa33.93■■■■□ 3.02
TSEN34-207ENST00000496583 URB2Q14146 1524 aaKnown RBP33.86■■■■□ 3.01
TSEN34-207ENST00000496583 WDR97A6NE52 1622 aa33.74■■■□□ 2.99
TSEN34-207ENST00000496583 PDS5BQ9NTI5 1447 aa33.72■■■□□ 2.99
TSEN34-207ENST00000496583 KIF21AQ7Z4S6 1674 aa33.71■■■□□ 2.99
TSEN34-207ENST00000496583 CUL7Q14999 1698 aa33.7■■■□□ 2.99
TSEN34-207ENST00000496583 DIEXFQ68CQ4 756 aaKnown RBP33.67■■■□□ 2.98
TSEN34-207ENST00000496583 RRBP1Q9P2E9 1410 aaKnown RBP33.65■■■□□ 2.98
TSEN34-207ENST00000496583 TIAM1Q13009 1591 aa33.62■■■□□ 2.97
TSEN34-207ENST00000496583 P3H3Q8IVL6 736 aa33.6■■■□□ 2.97
TSEN34-207ENST00000496583 ABCA5Q8WWZ7 1642 aa33.59■■■□□ 2.97
TSEN34-207ENST00000496583 TDRD9Q8NDG6 1382 aaKnown RBP33.59■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 323.6 ms