RNA–Protein interactions for RNA: ENST00000496023.1

FOXK1-203, Transcript of forkhead box K1, humanhuman

TSL 2

Gene FOXK1, Length 1,928 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXK1-203ENST00000496023 NISCHQ9Y2I1 1504 aa41.26■■■■■ 4.19
FOXK1-203ENST00000496023 CCDC180Q9P1Z9 1646 aa36.11■■■■□ 3.37
FOXK1-203ENST00000496023 ZCCHC6Q5VYS8 1495 aaKnown RBP34.59■■■■□ 3.13
FOXK1-203ENST00000496023 ABCC9O60706 1549 aa34.57■■■■□ 3.12
FOXK1-203ENST00000496023 DCAF8L2P0C7V8 631 aa34.22■■■■□ 3.07
FOXK1-203ENST00000496023 DCAF1Q9Y4B6 1507 aa34.05■■■■□ 3.04
FOXK1-203ENST00000496023 MYO15BQ96JP2 1530 aa33.76■■■□□ 2.99
FOXK1-203ENST00000496023 NACADO15069 1562 aa33.7■■■□□ 2.99
FOXK1-203ENST00000496023 RB1CC1Q8TDY2 1594 aa33.52■■■□□ 2.96
FOXK1-203ENST00000496023 SHROOM4Q9ULL8 1493 aa33.48■■■□□ 2.95
FOXK1-203ENST00000496023 SCRIBQ14160 1630 aa33.24■■■□□ 2.91
FOXK1-203ENST00000496023 UNC13AQ9UPW8 1703 aa32.96■■■□□ 2.87
FOXK1-203ENST00000496023 BICRAQ9NZM4 1560 aa32.61■■■□□ 2.81
FOXK1-203ENST00000496023 PABPN1Q86U42 306 aaKnown RBP eCLIP32.54■■■□□ 2.8
FOXK1-203ENST00000496023 CECR2Q9BXF3 1484 aa32.16■■■□□ 2.74
FOXK1-203ENST00000496023 SUPT5HO00267 1087 aaKnown RBP31.98■■■□□ 2.71
FOXK1-203ENST00000496023 MROH2BQ7Z745 1585 aa31.91■■■□□ 2.7
FOXK1-203ENST00000496023 RSF1Q96T23 1441 aaPredicted RBP31.88■■■□□ 2.69
FOXK1-203ENST00000496023 BAZ1AQ9NRL2 1556 aaPredicted RBP31.85■■■□□ 2.69
FOXK1-203ENST00000496023 SMARCA4P51532 1647 aa31.81■■■□□ 2.68
FOXK1-203ENST00000496023 WIZO95785 1651 aa31.65■■■□□ 2.66
FOXK1-203ENST00000496023 EIF4G1Q04637 1599 aaKnown RBP31.62■■■□□ 2.65
FOXK1-203ENST00000496023 PEG3Q9GZU2 1588 aa31.4■■■□□ 2.62
FOXK1-203ENST00000496023 ATAD2BQ9ULI0 1458 aa31.37■■■□□ 2.61
FOXK1-203ENST00000496023 SMARCA2P51531 1590 aa31.29■■■□□ 2.6
FOXK1-203ENST00000496023 CC2D2AQ9P2K1 1620 aa31.26■■■□□ 2.6
FOXK1-203ENST00000496023 TOP2AP11388 1531 aaKnown RBP31.24■■■□□ 2.59
FOXK1-203ENST00000496023 CHIC1Q5VXU3 224 aa31.24■■■□□ 2.59
FOXK1-203ENST00000496023 BAZ1BQ9UIG0 1483 aaKnown RBP31.15■■■□□ 2.58
FOXK1-203ENST00000496023 NCAPD3P42695 1498 aa31.13■■■□□ 2.57
FOXK1-203ENST00000496023 HMGXB3Q12766 1538 aa31.05■■■□□ 2.56
FOXK1-203ENST00000496023 CCDC88BA6NC98 1476 aa30.95■■■□□ 2.54
FOXK1-203ENST00000496023 DNAJC5BQ9UF47 199 aa30.89■■■□□ 2.54
FOXK1-203ENST00000496023 HRCP23327 699 aa30.37■■■□□ 2.45
FOXK1-203ENST00000496023 CFTRP13569 1480 aa30.35■■■□□ 2.45
FOXK1-203ENST00000496023 CADPSQ9ULU8 1353 aa30.31■■■□□ 2.44
FOXK1-203ENST00000496023 NESP48681 1621 aa30.27■■■□□ 2.44
FOXK1-203ENST00000496023 ABCC8Q09428 1581 aa30.22■■■□□ 2.43
FOXK1-203ENST00000496023 PRDM2Q13029 1718 aa30.19■■■□□ 2.42
FOXK1-203ENST00000496023 LAMC3Q9Y6N6 1575 aa30.12■■■□□ 2.41
FOXK1-203ENST00000496023 PCGF6Q9BYE7 350 aa30.12■■■□□ 2.41
FOXK1-203ENST00000496023 LOC105371045A0A1W2PR82 267 aa30.04■■■□□ 2.4
FOXK1-203ENST00000496023 TRIM41Q8WV44 630 aa30.03■■■□□ 2.4
FOXK1-203ENST00000496023 FANCD2Q9BXW9 1451 aa29.99■■■□□ 2.39
FOXK1-203ENST00000496023 WRNQ14191 1432 aaPredicted RBP eCLIP29.99■■■□□ 2.39
FOXK1-203ENST00000496023 SYNJ1O43426 1573 aa29.95■■■□□ 2.39
FOXK1-203ENST00000496023 KIF21AQ7Z4S6 1674 aa29.89■■■□□ 2.37
FOXK1-203ENST00000496023 PDS5BQ9NTI5 1447 aa29.88■■■□□ 2.37
FOXK1-203ENST00000496023 CUX1P39880 1505 aa29.85■■■□□ 2.37
FOXK1-203ENST00000496023 TRIM26Q12899 539 aaPredicted RBP29.85■■■□□ 2.37
FOXK1-203ENST00000496023 CEP164Q9UPV0 1460 aa29.82■■■□□ 2.36
FOXK1-203ENST00000496023 TOP2BQ02880 1626 aa29.8■■■□□ 2.36
FOXK1-203ENST00000496023 BIVM-ERCC5R4GMW8 1640 aa29.78■■■□□ 2.36
FOXK1-203ENST00000496023 URB2Q14146 1524 aaKnown RBP29.68■■■□□ 2.34
FOXK1-203ENST00000496023 DNMBPQ6XZF7 1577 aa29.65■■■□□ 2.34
FOXK1-203ENST00000496023 TOPBP1Q92547 1522 aa29.64■■■□□ 2.34
FOXK1-203ENST00000496023 ERCC6Q03468 1493 aa29.61■■■□□ 2.33
FOXK1-203ENST00000496023 FGD5Q6ZNL6 1462 aa29.57■■■□□ 2.32
FOXK1-203ENST00000496023 FAM9AQ8IZU1 332 aaPredicted RBP29.56■■■□□ 2.32
FOXK1-203ENST00000496023 SOGA1O94964 1423 aa29.56■■■□□ 2.32
FOXK1-203ENST00000496023 MRC2Q9UBG0 1479 aa29.55■■■□□ 2.32
FOXK1-203ENST00000496023 RUSC2Q8N2Y8 1516 aa29.51■■■□□ 2.31
FOXK1-203ENST00000496023 POLA1P09884 1462 aaPredicted RBP29.48■■■□□ 2.31
FOXK1-203ENST00000496023 THOC2Q8NI27 1593 aaKnown RBP29.47■■■□□ 2.31
FOXK1-203ENST00000496023 ZEB1P37275 1124 aaPredicted RBP29.44■■■□□ 2.3
FOXK1-203ENST00000496023 WDR62O43379 1518 aa29.43■■■□□ 2.3
FOXK1-203ENST00000496023 RAD54L2Q9Y4B4 1467 aa29.42■■■□□ 2.3
FOXK1-203ENST00000496023 PPARGC1BQ86YN6 1023 aaKnown RBP29.32■■■□□ 2.28
FOXK1-203ENST00000496023 CUX2O14529 1486 aa29.29■■■□□ 2.28
FOXK1-203ENST00000496023 EEA1Q15075 1411 aa29.28■■■□□ 2.28
FOXK1-203ENST00000496023 ABCA10Q8WWZ4 1543 aa29.26■■■□□ 2.27
FOXK1-203ENST00000496023 WDR97A6NE52 1622 aa29.25■■■□□ 2.27
FOXK1-203ENST00000496023 TARBP1Q13395 1621 aaKnown RBP29.25■■■□□ 2.27
FOXK1-203ENST00000496023 KIF27Q86VH2 1401 aa29.23■■■□□ 2.27
FOXK1-203ENST00000496023 CSRNP3Q8WYN3 585 aa29.22■■■□□ 2.27
FOXK1-203ENST00000496023 EHMT2Q96KQ7 1210 aa29.22■■■□□ 2.27
FOXK1-203ENST00000496023 TDRD9Q8NDG6 1382 aaKnown RBP29.14■■■□□ 2.26
FOXK1-203ENST00000496023 IFT140Q96RY7 1462 aa29.11■■■□□ 2.25
FOXK1-203ENST00000496023 ABCA5Q8WWZ7 1642 aa29.09■■■□□ 2.25
FOXK1-203ENST00000496023 ZNF608Q9ULD9 1512 aaPredicted RBP29.07■■■□□ 2.24
FOXK1-203ENST00000496023 IGF1RP08069 1367 aa29.06■■■□□ 2.24
FOXK1-203ENST00000496023 AQRO60306 1485 aaKnown RBP eCLIP29.03■■■□□ 2.243e-7■■■□□ 17.3
FOXK1-203ENST00000496023 GAPVD1Q14C86 1478 aa29.02■■■□□ 2.24
FOXK1-203ENST00000496023 KIF21BO75037 1637 aa28.99■■■□□ 2.23
FOXK1-203ENST00000496023 PRXQ9BXM0 1461 aa28.98■■■□□ 2.23
FOXK1-203ENST00000496023 RAPGEF2Q9Y4G8 1499 aa28.96■■■□□ 2.23
FOXK1-203ENST00000496023 EIF4G3O43432 1585 aaKnown RBP28.94■■■□□ 2.22
FOXK1-203ENST00000496023 PBRM1Q86U86 1689 aa28.92■■■□□ 2.22
FOXK1-203ENST00000496023 GOLGA3Q08378 1498 aa28.91■■■□□ 2.22
FOXK1-203ENST00000496023 ERICH3Q5RHP9 1530 aa28.9■■■□□ 2.22
FOXK1-203ENST00000496023 CARMIL1Q5VZK9 1371 aa28.88■■■□□ 2.21
FOXK1-203ENST00000496023 TNIKQ9UKE5 1360 aa28.85■■■□□ 2.21
FOXK1-203ENST00000496023 GRIN2BQ13224 1484 aa28.83■■■□□ 2.21
FOXK1-203ENST00000496023 CUL7Q14999 1698 aa28.83■■■□□ 2.21
FOXK1-203ENST00000496023 UBTFP17480 764 aaKnown RBP28.82■■■□□ 2.2
FOXK1-203ENST00000496023 CEP162Q5TB80 1403 aa28.78■■■□□ 2.2
FOXK1-203ENST00000496023 SNAPC4Q5SXM2 1469 aa28.74■■■□□ 2.19
FOXK1-203ENST00000496023 ADAMTS12P58397 1594 aa28.73■■■□□ 2.19
FOXK1-203ENST00000496023 FHAD1B1AJZ9 1412 aa28.67■■■□□ 2.18
FOXK1-203ENST00000496023 MAGI1Q96QZ7 1491 aaPredicted RBP28.62■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 175.2 ms