RNA–Protein interactions for RNA: ENST00000495610.6

LCK-213, Transcript of LCK proto-oncogene, Src family tyrosine kinase, humanhuman

TSL 5

Gene LCK, Length 1,060 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCK-213ENST00000495610 NISCHQ9Y2I1 1504 aa32.45■■■□□ 2.78
LCK-213ENST00000495610 CCDC180Q9P1Z9 1646 aa28.8■■■□□ 2.2
LCK-213ENST00000495610 ABCC9O60706 1549 aa27.97■■■□□ 2.07
LCK-213ENST00000495610 ZCCHC6Q5VYS8 1495 aaKnown RBP27.09■■□□□ 1.93
LCK-213ENST00000495610 NACADO15069 1562 aa27■■□□□ 1.91
LCK-213ENST00000495610 RB1CC1Q8TDY2 1594 aa27■■□□□ 1.91
LCK-213ENST00000495610 DCAF8L2P0C7V8 631 aa26.99■■□□□ 1.91
LCK-213ENST00000495610 MYO15BQ96JP2 1530 aa26.89■■□□□ 1.89
LCK-213ENST00000495610 DCAF1Q9Y4B6 1507 aa26.85■■□□□ 1.89
LCK-213ENST00000495610 UNC13AQ9UPW8 1703 aa26.39■■□□□ 1.82
LCK-213ENST00000495610 SCRIBQ14160 1630 aa26.3■■□□□ 1.8
LCK-213ENST00000495610 BICRAQ9NZM4 1560 aa26.17■■□□□ 1.78
LCK-213ENST00000495610 PABPN1Q86U42 306 aaKnown RBP eCLIP26.13■■□□□ 1.77
LCK-213ENST00000495610 SHROOM4Q9ULL8 1493 aa25.91■■□□□ 1.74
LCK-213ENST00000495610 EIF4G1Q04637 1599 aaKnown RBP25.47■■□□□ 1.67
LCK-213ENST00000495610 DNAJC5BQ9UF47 199 aa25.44■■□□□ 1.66
LCK-213ENST00000495610 CC2D2AQ9P2K1 1620 aa25.31■■□□□ 1.64
LCK-213ENST00000495610 CECR2Q9BXF3 1484 aa25.25■■□□□ 1.63
LCK-213ENST00000495610 SMARCA4P51532 1647 aa25.16■■□□□ 1.62
LCK-213ENST00000495610 BAZ1AQ9NRL2 1556 aaPredicted RBP25.14■■□□□ 1.62
LCK-213ENST00000495610 MROH2BQ7Z745 1585 aa25.01■■□□□ 1.59
LCK-213ENST00000495610 ATAD2BQ9ULI0 1458 aa24.95■■□□□ 1.58
LCK-213ENST00000495610 SMARCA2P51531 1590 aa24.94■■□□□ 1.58
LCK-213ENST00000495610 PEG3Q9GZU2 1588 aa24.89■■□□□ 1.58
LCK-213ENST00000495610 NCAPD3P42695 1498 aa24.89■■□□□ 1.57
LCK-213ENST00000495610 HMGXB3Q12766 1538 aa24.82■■□□□ 1.56
LCK-213ENST00000495610 RSF1Q96T23 1441 aaPredicted RBP24.78■■□□□ 1.56
LCK-213ENST00000495610 BAZ1BQ9UIG0 1483 aaKnown RBP24.77■■□□□ 1.56
LCK-213ENST00000495610 WIZO95785 1651 aa24.77■■□□□ 1.56
LCK-213ENST00000495610 TOP2AP11388 1531 aaKnown RBP24.53■■□□□ 1.52
LCK-213ENST00000495610 SUPT5HO00267 1087 aaKnown RBP24.29■■□□□ 1.48
LCK-213ENST00000495610 NESP48681 1621 aa24.26■■□□□ 1.47
LCK-213ENST00000495610 LAMC3Q9Y6N6 1575 aa24.24■■□□□ 1.47
LCK-213ENST00000495610 CCDC88BA6NC98 1476 aa24.21■■□□□ 1.47
LCK-213ENST00000495610 CADPSQ9ULU8 1353 aa24.17■■□□□ 1.46
LCK-213ENST00000495610 ERCC6Q03468 1493 aa24.1■■□□□ 1.45
LCK-213ENST00000495610 CFTRP13569 1480 aa24.08■■□□□ 1.45
LCK-213ENST00000495610 PDS5BQ9NTI5 1447 aa24.04■■□□□ 1.44
LCK-213ENST00000495610 KIF21AQ7Z4S6 1674 aa24.01■■□□□ 1.43
LCK-213ENST00000495610 PRDM2Q13029 1718 aa23.96■■□□□ 1.43
LCK-213ENST00000495610 FANCD2Q9BXW9 1451 aa23.92■■□□□ 1.42
LCK-213ENST00000495610 CEP164Q9UPV0 1460 aa23.88■■□□□ 1.41
LCK-213ENST00000495610 THOC2Q8NI27 1593 aaKnown RBP23.88■■□□□ 1.41
LCK-213ENST00000495610 MRC2Q9UBG0 1479 aa23.81■■□□□ 1.4
LCK-213ENST00000495610 CUX2O14529 1486 aa23.76■■□□□ 1.39
LCK-213ENST00000495610 WDR62O43379 1518 aa23.73■■□□□ 1.39
LCK-213ENST00000495610 URB2Q14146 1524 aaKnown RBP23.68■■□□□ 1.38
LCK-213ENST00000495610 DNMBPQ6XZF7 1577 aa23.57■■□□□ 1.36
LCK-213ENST00000495610 TOPBP1Q92547 1522 aa23.56■■□□□ 1.36
LCK-213ENST00000495610 ABCC8Q09428 1581 aa23.55■■□□□ 1.36
LCK-213ENST00000495610 CUX1P39880 1505 aa23.46■■□□□ 1.35
LCK-213ENST00000495610 POLA1P09884 1462 aaPredicted RBP23.38■■□□□ 1.33
LCK-213ENST00000495610 WRNQ14191 1432 aaPredicted RBP eCLIP23.38■■□□□ 1.33
LCK-213ENST00000495610 IFT140Q96RY7 1462 aa23.36■■□□□ 1.33
LCK-213ENST00000495610 FGD5Q6ZNL6 1462 aa23.36■■□□□ 1.33
LCK-213ENST00000495610 SYNJ1O43426 1573 aa23.34■■□□□ 1.33
LCK-213ENST00000495610 BIVM-ERCC5R4GMW8 1640 aa23.33■■□□□ 1.32
LCK-213ENST00000495610 TOP2BQ02880 1626 aa23.32■■□□□ 1.32
LCK-213ENST00000495610 TARBP1Q13395 1621 aaKnown RBP23.3■■□□□ 1.32
LCK-213ENST00000495610 RAD54L2Q9Y4B4 1467 aa23.27■■□□□ 1.32
LCK-213ENST00000495610 SOGA1O94964 1423 aa23.26■■□□□ 1.31
LCK-213ENST00000495610 ZNF608Q9ULD9 1512 aaPredicted RBP23.24■■□□□ 1.31
LCK-213ENST00000495610 EIF4G3O43432 1585 aaKnown RBP23.2■■□□□ 1.3
LCK-213ENST00000495610 WDR97A6NE52 1622 aa23.19■■□□□ 1.3
LCK-213ENST00000495610 ABCA10Q8WWZ4 1543 aa23.13■■□□□ 1.29
LCK-213ENST00000495610 AQRO60306 1485 aaKnown RBP eCLIP23.12■■□□□ 1.29
LCK-213ENST00000495610 TDRD9Q8NDG6 1382 aaKnown RBP23.11■■□□□ 1.29
LCK-213ENST00000495610 ABCA5Q8WWZ7 1642 aa23.05■■□□□ 1.28
LCK-213ENST00000495610 GAPVD1Q14C86 1478 aa23.01■■□□□ 1.27
LCK-213ENST00000495610 PBRM1Q86U86 1689 aa23■■□□□ 1.27
LCK-213ENST00000495610 GRIN2BQ13224 1484 aa22.98■■□□□ 1.27
LCK-213ENST00000495610 SNAPC4Q5SXM2 1469 aa22.95■■□□□ 1.26
LCK-213ENST00000495610 TRIM41Q8WV44 630 aa22.92■■□□□ 1.26
LCK-213ENST00000495610 DNAJC5Q9H3Z4 198 aa22.92■■□□□ 1.26
LCK-213ENST00000495610 MAGI1Q96QZ7 1491 aaPredicted RBP22.91■■□□□ 1.26
LCK-213ENST00000495610 CHD1O14646 1710 aa22.86■■□□□ 1.25
LCK-213ENST00000495610 KIF27Q86VH2 1401 aa22.86■■□□□ 1.25
LCK-213ENST00000495610 ERICH3Q5RHP9 1530 aa22.86■■□□□ 1.25
LCK-213ENST00000495610 ADAMTS12P58397 1594 aa22.83■■□□□ 1.25
LCK-213ENST00000495610 SYNJ2O15056 1496 aa22.82■■□□□ 1.24
LCK-213ENST00000495610 FBLN2P98095 1184 aa22.8■■□□□ 1.24
LCK-213ENST00000495610 CHIC1Q5VXU3 224 aa22.76■■□□□ 1.23
LCK-213ENST00000495610 OSCARQ8IYS5 282 aa22.76■■□□□ 1.23
LCK-213ENST00000495610 CHMP7Q8WUX9 453 aaPredicted RBP22.76■■□□□ 1.23
LCK-213ENST00000495610 FHAD1B1AJZ9 1412 aa22.75■■□□□ 1.23
LCK-213ENST00000495610 RUSC2Q8N2Y8 1516 aa22.72■■□□□ 1.23
LCK-213ENST00000495610 IGF1RP08069 1367 aa22.72■■□□□ 1.23
LCK-213ENST00000495610 CUL7Q14999 1698 aa22.71■■□□□ 1.23
LCK-213ENST00000495610 GRIN2AQ12879 1464 aa22.7■■□□□ 1.22
LCK-213ENST00000495610 CLASP1Q7Z460 1538 aa22.61■■□□□ 1.21
LCK-213ENST00000495610 CARMIL1Q5VZK9 1371 aa22.6■■□□□ 1.21
LCK-213ENST00000495610 CEP170Q5SW79 1584 aa22.59■■□□□ 1.21
LCK-213ENST00000495610 NUP160Q12769 1436 aa22.57■■□□□ 1.2
LCK-213ENST00000495610 EEA1Q15075 1411 aa22.56■■□□□ 1.2
LCK-213ENST00000495610 RAPGEF2Q9Y4G8 1499 aa22.51■■□□□ 1.19
LCK-213ENST00000495610 PRXQ9BXM0 1461 aa22.47■■□□□ 1.19
LCK-213ENST00000495610 FAM9AQ8IZU1 332 aaPredicted RBP22.46■■□□□ 1.19
LCK-213ENST00000495610 CSRNP3Q8WYN3 585 aa22.46■■□□□ 1.19
LCK-213ENST00000495610 ARHGEF11O15085 1522 aa22.45■■□□□ 1.18
LCK-213ENST00000495610 RIMBP3CA6NJZ7 1639 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms