RNA–Protein interactions for RNA: ENST00000495564.5

ARHGEF9-207, Transcript of Cdc42 guanine nucleotide exchange factor 9, humanhuman

TSL 2

Gene ARHGEF9, Length 2,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF9-207ENST00000495564 NISCHQ9Y2I1 1504 aa25.41■■□□□ 1.66
ARHGEF9-207ENST00000495564 CCDC180Q9P1Z9 1646 aa22.06■■□□□ 1.12
ARHGEF9-207ENST00000495564 DCAF8L2P0C7V8 631 aa21.83■■□□□ 1.08
ARHGEF9-207ENST00000495564 ABCC9O60706 1549 aa21.67■■□□□ 1.06
ARHGEF9-207ENST00000495564 ZCCHC6Q5VYS8 1495 aaKnown RBP21.22■□□□□ 0.99
ARHGEF9-207ENST00000495564 SHROOM4Q9ULL8 1493 aa21.14■□□□□ 0.97
ARHGEF9-207ENST00000495564 DCAF1Q9Y4B6 1507 aa20.73■□□□□ 0.91
ARHGEF9-207ENST00000495564 NACADO15069 1562 aa20.71■□□□□ 0.91
ARHGEF9-207ENST00000495564 RB1CC1Q8TDY2 1594 aa20.69■□□□□ 0.9
ARHGEF9-207ENST00000495564 SCRIBQ14160 1630 aa20.68■□□□□ 0.9
ARHGEF9-207ENST00000495564 PABPN1Q86U42 306 aaKnown RBP eCLIP20.55■□□□□ 0.88
ARHGEF9-207ENST00000495564 MYO15BQ96JP2 1530 aa20.53■□□□□ 0.88
ARHGEF9-207ENST00000495564 UNC13AQ9UPW8 1703 aa20.31■□□□□ 0.84
ARHGEF9-207ENST00000495564 SUPT5HO00267 1087 aaKnown RBP20.22■□□□□ 0.83
ARHGEF9-207ENST00000495564 BICRAQ9NZM4 1560 aa20.08■□□□□ 0.8
ARHGEF9-207ENST00000495564 CECR2Q9BXF3 1484 aa19.97■□□□□ 0.79
ARHGEF9-207ENST00000495564 MROH2BQ7Z745 1585 aa19.75■□□□□ 0.75
ARHGEF9-207ENST00000495564 RSF1Q96T23 1441 aaPredicted RBP19.7■□□□□ 0.74
ARHGEF9-207ENST00000495564 BAZ1AQ9NRL2 1556 aaPredicted RBP19.62■□□□□ 0.73
ARHGEF9-207ENST00000495564 WIZO95785 1651 aa19.6■□□□□ 0.73
ARHGEF9-207ENST00000495564 SMARCA4P51532 1647 aa19.59■□□□□ 0.73
ARHGEF9-207ENST00000495564 EIF4G1Q04637 1599 aaKnown RBP19.56■□□□□ 0.72
ARHGEF9-207ENST00000495564 DNAJC5BQ9UF47 199 aa19.46■□□□□ 0.71
ARHGEF9-207ENST00000495564 CC2D2AQ9P2K1 1620 aa19.4■□□□□ 0.7
ARHGEF9-207ENST00000495564 ATAD2BQ9ULI0 1458 aa19.39■□□□□ 0.69
ARHGEF9-207ENST00000495564 BAZ1BQ9UIG0 1483 aaKnown RBP19.33■□□□□ 0.69
ARHGEF9-207ENST00000495564 SMARCA2P51531 1590 aa19.28■□□□□ 0.68
ARHGEF9-207ENST00000495564 TOP2AP11388 1531 aaKnown RBP19.2■□□□□ 0.66
ARHGEF9-207ENST00000495564 NCAPD3P42695 1498 aa19.17■□□□□ 0.66
ARHGEF9-207ENST00000495564 PEG3Q9GZU2 1588 aa19.16■□□□□ 0.66
ARHGEF9-207ENST00000495564 CCDC88BA6NC98 1476 aa19.15■□□□□ 0.66
ARHGEF9-207ENST00000495564 HMGXB3Q12766 1538 aa19.04■□□□□ 0.64
ARHGEF9-207ENST00000495564 CHIC1Q5VXU3 224 aa18.91■□□□□ 0.62
ARHGEF9-207ENST00000495564 NESP48681 1621 aa18.9■□□□□ 0.62
ARHGEF9-207ENST00000495564 TRIM41Q8WV44 630 aa18.85■□□□□ 0.61
ARHGEF9-207ENST00000495564 ABCC8Q09428 1581 aa18.8■□□□□ 0.6
ARHGEF9-207ENST00000495564 CADPSQ9ULU8 1353 aa18.79■□□□□ 0.6
ARHGEF9-207ENST00000495564 FAM9AQ8IZU1 332 aaPredicted RBP18.77■□□□□ 0.6
ARHGEF9-207ENST00000495564 EHMT2Q96KQ7 1210 aa18.77■□□□□ 0.6
ARHGEF9-207ENST00000495564 CFTRP13569 1480 aa18.71■□□□□ 0.59
ARHGEF9-207ENST00000495564 FANCD2Q9BXW9 1451 aa18.62■□□□□ 0.57
ARHGEF9-207ENST00000495564 WRNQ14191 1432 aaPredicted RBP eCLIP18.59■□□□□ 0.57
ARHGEF9-207ENST00000495564 ERCC6Q03468 1493 aa18.58■□□□□ 0.57
ARHGEF9-207ENST00000495564 LAMC3Q9Y6N6 1575 aa18.55■□□□□ 0.56
ARHGEF9-207ENST00000495564 PDS5BQ9NTI5 1447 aa18.55■□□□□ 0.56
ARHGEF9-207ENST00000495564 KIF21AQ7Z4S6 1674 aa18.52■□□□□ 0.55
ARHGEF9-207ENST00000495564 CEP164Q9UPV0 1460 aa18.51■□□□□ 0.55
ARHGEF9-207ENST00000495564 SYNJ1O43426 1573 aa18.5■□□□□ 0.55
ARHGEF9-207ENST00000495564 CUX1P39880 1505 aa18.44■□□□□ 0.54
ARHGEF9-207ENST00000495564 PRDM2Q13029 1718 aa18.44■□□□□ 0.54
ARHGEF9-207ENST00000495564 LOC105371045A0A1W2PR82 267 aa18.43■□□□□ 0.54
ARHGEF9-207ENST00000495564 SOGA1O94964 1423 aa18.39■□□□□ 0.54
ARHGEF9-207ENST00000495564 URB2Q14146 1524 aaKnown RBP18.38■□□□□ 0.53
ARHGEF9-207ENST00000495564 RUSC2Q8N2Y8 1516 aa18.36■□□□□ 0.53
ARHGEF9-207ENST00000495564 TOPBP1Q92547 1522 aa18.34■□□□□ 0.53
ARHGEF9-207ENST00000495564 RAD54L2Q9Y4B4 1467 aa18.34■□□□□ 0.53
ARHGEF9-207ENST00000495564 FGD5Q6ZNL6 1462 aa18.34■□□□□ 0.53
ARHGEF9-207ENST00000495564 TOP2BQ02880 1626 aa18.32■□□□□ 0.52
ARHGEF9-207ENST00000495564 RANGAP1P46060 587 aaPredicted RBP18.29■□□□□ 0.52
ARHGEF9-207ENST00000495564 MRC2Q9UBG0 1479 aa18.28■□□□□ 0.52
ARHGEF9-207ENST00000495564 TDRD9Q8NDG6 1382 aaKnown RBP18.27■□□□□ 0.52
ARHGEF9-207ENST00000495564 POLA1P09884 1462 aaPredicted RBP18.26■□□□□ 0.51
ARHGEF9-207ENST00000495564 DNMBPQ6XZF7 1577 aa18.26■□□□□ 0.51
ARHGEF9-207ENST00000495564 CUX2O14529 1486 aa18.23■□□□□ 0.51
ARHGEF9-207ENST00000495564 BIVM-ERCC5R4GMW8 1640 aa18.23■□□□□ 0.51
ARHGEF9-207ENST00000495564 CSRNP3Q8WYN3 585 aa18.21■□□□□ 0.51
ARHGEF9-207ENST00000495564 UBTFP17480 764 aaKnown RBP18.18■□□□□ 0.5
ARHGEF9-207ENST00000495564 THOC2Q8NI27 1593 aaKnown RBP18.15■□□□□ 0.5
ARHGEF9-207ENST00000495564 AQRO60306 1485 aaKnown RBP eCLIP18.15■□□□□ 0.5
ARHGEF9-207ENST00000495564 FBLN2P98095 1184 aa18.13■□□□□ 0.49
ARHGEF9-207ENST00000495564 KIF27Q86VH2 1401 aa18.12■□□□□ 0.49
ARHGEF9-207ENST00000495564 ZNF608Q9ULD9 1512 aaPredicted RBP18.12■□□□□ 0.49
ARHGEF9-207ENST00000495564 WDR62O43379 1518 aa18.12■□□□□ 0.49
ARHGEF9-207ENST00000495564 PCGF6Q9BYE7 350 aa18.02■□□□□ 0.48
ARHGEF9-207ENST00000495564 ABCA10Q8WWZ4 1543 aa18.02■□□□□ 0.48
ARHGEF9-207ENST00000495564 IGF1RP08069 1367 aa18.02■□□□□ 0.47
ARHGEF9-207ENST00000495564 GAPVD1Q14C86 1478 aa18.01■□□□□ 0.47
ARHGEF9-207ENST00000495564 TARBP1Q13395 1621 aaKnown RBP18■□□□□ 0.47
ARHGEF9-207ENST00000495564 IFT140Q96RY7 1462 aa17.99■□□□□ 0.47
ARHGEF9-207ENST00000495564 RAPGEF2Q9Y4G8 1499 aa17.98■□□□□ 0.47
ARHGEF9-207ENST00000495564 CARMIL1Q5VZK9 1371 aa17.96■□□□□ 0.47
ARHGEF9-207ENST00000495564 EEA1Q15075 1411 aa17.96■□□□□ 0.47
ARHGEF9-207ENST00000495564 TTBK1Q5TCY1 1321 aaPredicted RBP17.92■□□□□ 0.46
ARHGEF9-207ENST00000495564 CHMP7Q8WUX9 453 aaPredicted RBP17.92■□□□□ 0.46
ARHGEF9-207ENST00000495564 EIF4G3O43432 1585 aaKnown RBP17.91■□□□□ 0.46
ARHGEF9-207ENST00000495564 WDR97A6NE52 1622 aa17.89■□□□□ 0.46
ARHGEF9-207ENST00000495564 P3H3Q8IVL6 736 aa17.88■□□□□ 0.45
ARHGEF9-207ENST00000495564 ABCA5Q8WWZ7 1642 aa17.86■□□□□ 0.45
ARHGEF9-207ENST00000495564 GOLGA3Q08378 1498 aa17.86■□□□□ 0.45
ARHGEF9-207ENST00000495564 SNAPC4Q5SXM2 1469 aa17.86■□□□□ 0.45
ARHGEF9-207ENST00000495564 GRIN2BQ13224 1484 aa17.85■□□□□ 0.45
ARHGEF9-207ENST00000495564 PBRM1Q86U86 1689 aa17.83■□□□□ 0.44
ARHGEF9-207ENST00000495564 PRXQ9BXM0 1461 aa17.83■□□□□ 0.44
ARHGEF9-207ENST00000495564 PPARGC1BQ86YN6 1023 aaKnown RBP17.83■□□□□ 0.44
ARHGEF9-207ENST00000495564 HRCP23327 699 aa17.77■□□□□ 0.44
ARHGEF9-207ENST00000495564 ERICH3Q5RHP9 1530 aa17.77■□□□□ 0.43
ARHGEF9-207ENST00000495564 KIF21BO75037 1637 aa17.76■□□□□ 0.43
ARHGEF9-207ENST00000495564 ATP1B4Q9UN42 357 aaPredicted RBP17.75■□□□□ 0.43
ARHGEF9-207ENST00000495564 CEP162Q5TB80 1403 aa17.74■□□□□ 0.43
ARHGEF9-207ENST00000495564 FHAD1B1AJZ9 1412 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms