RNA–Protein interactions for RNA: ENST00000495415.5

MMS19-219, Transcript of MMS19 homolog, cytosolic iron-sulfur assembly component, humanhuman

TSL 5

Gene MMS19, Length 1,879 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMS19-219ENST00000495415 NISCHQ9Y2I1 1504 aa31.05■■■□□ 2.56
MMS19-219ENST00000495415 CCDC180Q9P1Z9 1646 aa27.46■■□□□ 1.99
MMS19-219ENST00000495415 ABCC9O60706 1549 aa26.53■■□□□ 1.84
MMS19-219ENST00000495415 ZCCHC6Q5VYS8 1495 aaKnown RBP25.94■■□□□ 1.74
MMS19-219ENST00000495415 NACADO15069 1562 aa25.74■■□□□ 1.71
MMS19-219ENST00000495415 DCAF1Q9Y4B6 1507 aa25.73■■□□□ 1.71
MMS19-219ENST00000495415 DCAF8L2P0C7V8 631 aa25.72■■□□□ 1.71
MMS19-219ENST00000495415 MYO15BQ96JP2 1530 aa25.72■■□□□ 1.71
MMS19-219ENST00000495415 RB1CC1Q8TDY2 1594 aa25.67■■□□□ 1.7
MMS19-219ENST00000495415 UNC13AQ9UPW8 1703 aa25.12■■□□□ 1.61
MMS19-219ENST00000495415 SCRIBQ14160 1630 aa25.06■■□□□ 1.6
MMS19-219ENST00000495415 BICRAQ9NZM4 1560 aa24.93■■□□□ 1.58
MMS19-219ENST00000495415 PABPN1Q86U42 306 aaKnown RBP eCLIP24.85■■□□□ 1.575e-7■■■■□ 19.3
MMS19-219ENST00000495415 SHROOM4Q9ULL8 1493 aa24.69■■□□□ 1.54
MMS19-219ENST00000495415 EIF4G1Q04637 1599 aaKnown RBP24.22■■□□□ 1.47
MMS19-219ENST00000495415 CECR2Q9BXF3 1484 aa24.16■■□□□ 1.46
MMS19-219ENST00000495415 DNAJC5BQ9UF47 199 aa24.11■■□□□ 1.45
MMS19-219ENST00000495415 CC2D2AQ9P2K1 1620 aa24.04■■□□□ 1.44
MMS19-219ENST00000495415 BAZ1AQ9NRL2 1556 aaPredicted RBP24.03■■□□□ 1.44
MMS19-219ENST00000495415 SMARCA4P51532 1647 aa24.01■■□□□ 1.43
MMS19-219ENST00000495415 MROH2BQ7Z745 1585 aa23.94■■□□□ 1.42
MMS19-219ENST00000495415 ATAD2BQ9ULI0 1458 aa23.82■■□□□ 1.4
MMS19-219ENST00000495415 PEG3Q9GZU2 1588 aa23.8■■□□□ 1.4
MMS19-219ENST00000495415 RSF1Q96T23 1441 aaPredicted RBP23.79■■□□□ 1.4
MMS19-219ENST00000495415 SMARCA2P51531 1590 aa23.79■■□□□ 1.4
MMS19-219ENST00000495415 NCAPD3P42695 1498 aa23.76■■□□□ 1.39
MMS19-219ENST00000495415 WIZO95785 1651 aa23.68■■□□□ 1.38
MMS19-219ENST00000495415 HMGXB3Q12766 1538 aa23.67■■□□□ 1.38
MMS19-219ENST00000495415 BAZ1BQ9UIG0 1483 aaKnown RBP23.61■■□□□ 1.37
MMS19-219ENST00000495415 TOP2AP11388 1531 aaKnown RBP23.46■■□□□ 1.35
MMS19-219ENST00000495415 SUPT5HO00267 1087 aaKnown RBP23.35■■□□□ 1.33
MMS19-219ENST00000495415 CCDC88BA6NC98 1476 aa23.18■■□□□ 1.3
MMS19-219ENST00000495415 NESP48681 1621 aa23.08■■□□□ 1.28
MMS19-219ENST00000495415 CADPSQ9ULU8 1353 aa23.07■■□□□ 1.28
MMS19-219ENST00000495415 LAMC3Q9Y6N6 1575 aa23.06■■□□□ 1.28
MMS19-219ENST00000495415 CFTRP13569 1480 aa23.02■■□□□ 1.28
MMS19-219ENST00000495415 PDS5BQ9NTI5 1447 aa22.88■■□□□ 1.25
MMS19-219ENST00000495415 PRDM2Q13029 1718 aa22.84■■□□□ 1.25
MMS19-219ENST00000495415 ERCC6Q03468 1493 aa22.82■■□□□ 1.24
MMS19-219ENST00000495415 KIF21AQ7Z4S6 1674 aa22.8■■□□□ 1.24
MMS19-219ENST00000495415 FANCD2Q9BXW9 1451 aa22.8■■□□□ 1.24
MMS19-219ENST00000495415 CEP164Q9UPV0 1460 aa22.73■■□□□ 1.23
MMS19-219ENST00000495415 THOC2Q8NI27 1593 aaKnown RBP22.67■■□□□ 1.22
MMS19-219ENST00000495415 MRC2Q9UBG0 1479 aa22.64■■□□□ 1.22
MMS19-219ENST00000495415 WDR62O43379 1518 aa22.57■■□□□ 1.2
MMS19-219ENST00000495415 URB2Q14146 1524 aaKnown RBP22.57■■□□□ 1.2
MMS19-219ENST00000495415 CUX2O14529 1486 aa22.5■■□□□ 1.19
MMS19-219ENST00000495415 ABCC8Q09428 1581 aa22.48■■□□□ 1.19
MMS19-219ENST00000495415 TOPBP1Q92547 1522 aa22.48■■□□□ 1.19
MMS19-219ENST00000495415 DNMBPQ6XZF7 1577 aa22.48■■□□□ 1.19
MMS19-219ENST00000495415 CUX1P39880 1505 aa22.45■■□□□ 1.18
MMS19-219ENST00000495415 WRNQ14191 1432 aaPredicted RBP eCLIP22.39■■□□□ 1.17
MMS19-219ENST00000495415 SYNJ1O43426 1573 aa22.34■■□□□ 1.17
MMS19-219ENST00000495415 TOP2BQ02880 1626 aa22.32■■□□□ 1.16
MMS19-219ENST00000495415 BIVM-ERCC5R4GMW8 1640 aa22.32■■□□□ 1.16
MMS19-219ENST00000495415 POLA1P09884 1462 aaPredicted RBP22.31■■□□□ 1.16
MMS19-219ENST00000495415 FGD5Q6ZNL6 1462 aa22.29■■□□□ 1.16
MMS19-219ENST00000495415 IFT140Q96RY7 1462 aa22.25■■□□□ 1.15
MMS19-219ENST00000495415 TARBP1Q13395 1621 aaKnown RBP22.22■■□□□ 1.15
MMS19-219ENST00000495415 SOGA1O94964 1423 aa22.21■■□□□ 1.15
MMS19-219ENST00000495415 RAD54L2Q9Y4B4 1467 aa22.2■■□□□ 1.14
MMS19-219ENST00000495415 ZNF608Q9ULD9 1512 aaPredicted RBP22.13■■□□□ 1.13
MMS19-219ENST00000495415 ABCA10Q8WWZ4 1543 aa22.11■■□□□ 1.13
MMS19-219ENST00000495415 WDR97A6NE52 1622 aa22.11■■□□□ 1.13
MMS19-219ENST00000495415 EIF4G3O43432 1585 aaKnown RBP22.05■■□□□ 1.12
MMS19-219ENST00000495415 TRIM41Q8WV44 630 aa22.05■■□□□ 1.12
MMS19-219ENST00000495415 TDRD9Q8NDG6 1382 aaKnown RBP22.04■■□□□ 1.12
MMS19-219ENST00000495415 AQRO60306 1485 aaKnown RBP eCLIP22.04■■□□□ 1.123e-9■■■■■ 36.3
MMS19-219ENST00000495415 CHIC1Q5VXU3 224 aa22.03■■□□□ 1.12
MMS19-219ENST00000495415 ABCA5Q8WWZ7 1642 aa21.99■■□□□ 1.11
MMS19-219ENST00000495415 GAPVD1Q14C86 1478 aa21.96■■□□□ 1.11
MMS19-219ENST00000495415 GRIN2BQ13224 1484 aa21.91■■□□□ 1.1
MMS19-219ENST00000495415 KIF27Q86VH2 1401 aa21.89■■□□□ 1.09
MMS19-219ENST00000495415 PBRM1Q86U86 1689 aa21.88■■□□□ 1.09
MMS19-219ENST00000495415 ERICH3Q5RHP9 1530 aa21.84■■□□□ 1.09
MMS19-219ENST00000495415 SNAPC4Q5SXM2 1469 aa21.84■■□□□ 1.09
MMS19-219ENST00000495415 MAGI1Q96QZ7 1491 aaPredicted RBP21.83■■□□□ 1.09
MMS19-219ENST00000495415 RUSC2Q8N2Y8 1516 aa21.81■■□□□ 1.08
MMS19-219ENST00000495415 IGF1RP08069 1367 aa21.8■■□□□ 1.08
MMS19-219ENST00000495415 ADAMTS12P58397 1594 aa21.75■■□□□ 1.07
MMS19-219ENST00000495415 SYNJ2O15056 1496 aa21.74■■□□□ 1.07
MMS19-219ENST00000495415 FHAD1B1AJZ9 1412 aa21.72■■□□□ 1.07
MMS19-219ENST00000495415 CHD1O14646 1710 aa21.7■■□□□ 1.06
MMS19-219ENST00000495415 CUL7Q14999 1698 aa21.69■■□□□ 1.06
MMS19-219ENST00000495415 EEA1Q15075 1411 aa21.69■■□□□ 1.06
MMS19-219ENST00000495415 CHMP7Q8WUX9 453 aaPredicted RBP21.66■■□□□ 1.06
MMS19-219ENST00000495415 FBLN2P98095 1184 aa21.65■■□□□ 1.06
MMS19-219ENST00000495415 CARMIL1Q5VZK9 1371 aa21.65■■□□□ 1.06
MMS19-219ENST00000495415 GRIN2AQ12879 1464 aa21.64■■□□□ 1.06
MMS19-219ENST00000495415 OSCARQ8IYS5 282 aa21.61■■□□□ 1.05
MMS19-219ENST00000495415 CSRNP3Q8WYN3 585 aa21.61■■□□□ 1.05
MMS19-219ENST00000495415 PRXQ9BXM0 1461 aa21.59■■□□□ 1.05
MMS19-219ENST00000495415 FAM9AQ8IZU1 332 aaPredicted RBP21.56■■□□□ 1.04
MMS19-219ENST00000495415 RAPGEF2Q9Y4G8 1499 aa21.55■■□□□ 1.04
MMS19-219ENST00000495415 NUP160Q12769 1436 aa21.55■■□□□ 1.04
MMS19-219ENST00000495415 CEP170Q5SW79 1584 aa21.52■■□□□ 1.04
MMS19-219ENST00000495415 CLASP1Q7Z460 1538 aa21.51■■□□□ 1.03
MMS19-219ENST00000495415 KIF21BO75037 1637 aa21.45■■□□□ 1.02
MMS19-219ENST00000495415 DNAJC5Q9H3Z4 198 aa21.45■■□□□ 1.02
MMS19-219ENST00000495415 KIAA0586Q9BVV6 1533 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms