RNA–Protein interactions for RNA: ENST00000494743.1

BRD3-206, Transcript of bromodomain containing 3, humanhuman

TSL 3

Gene BRD3, Length 507 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-206ENST00000494743 NISCHQ9Y2I1 1504 aa28.38■■■□□ 2.13
BRD3-206ENST00000494743 CCDC180Q9P1Z9 1646 aa24.91■■□□□ 1.58
BRD3-206ENST00000494743 ABCC9O60706 1549 aa24.61■■□□□ 1.53
BRD3-206ENST00000494743 DNAJC5BQ9UF47 199 aa23.81■■□□□ 1.4
BRD3-206ENST00000494743 ZCCHC6Q5VYS8 1495 aaKnown RBP23.8■■□□□ 1.4
BRD3-206ENST00000494743 DCAF1Q9Y4B6 1507 aa23.53■■□□□ 1.36
BRD3-206ENST00000494743 MYO15BQ96JP2 1530 aa23.4■■□□□ 1.34
BRD3-206ENST00000494743 DCAF8L2P0C7V8 631 aa23.35■■□□□ 1.33
BRD3-206ENST00000494743 NACADO15069 1562 aa23.29■■□□□ 1.32
BRD3-206ENST00000494743 RB1CC1Q8TDY2 1594 aa23.15■■□□□ 1.3
BRD3-206ENST00000494743 SCRIBQ14160 1630 aa22.79■■□□□ 1.24
BRD3-206ENST00000494743 SHROOM4Q9ULL8 1493 aa22.75■■□□□ 1.23
BRD3-206ENST00000494743 PABPN1Q86U42 306 aaKnown RBP eCLIP22.73■■□□□ 1.23
BRD3-206ENST00000494743 UNC13AQ9UPW8 1703 aa22.6■■□□□ 1.21
BRD3-206ENST00000494743 DNAJC5Q9H3Z4 198 aa22.5■■□□□ 1.19
BRD3-206ENST00000494743 BICRAQ9NZM4 1560 aa22.49■■□□□ 1.19
BRD3-206ENST00000494743 CECR2Q9BXF3 1484 aa22.25■■□□□ 1.15
BRD3-206ENST00000494743 CC2D2AQ9P2K1 1620 aa22.2■■□□□ 1.14
BRD3-206ENST00000494743 EIF4G1Q04637 1599 aaKnown RBP21.93■■□□□ 1.1
BRD3-206ENST00000494743 BAZ1AQ9NRL2 1556 aaPredicted RBP21.93■■□□□ 1.1
BRD3-206ENST00000494743 MROH2BQ7Z745 1585 aa21.89■■□□□ 1.09
BRD3-206ENST00000494743 RSF1Q96T23 1441 aaPredicted RBP21.87■■□□□ 1.09
BRD3-206ENST00000494743 SMARCA4P51532 1647 aa21.87■■□□□ 1.09
BRD3-206ENST00000494743 SUPT5HO00267 1087 aaKnown RBP21.68■■□□□ 1.06
BRD3-206ENST00000494743 PEG3Q9GZU2 1588 aa21.68■■□□□ 1.06
BRD3-206ENST00000494743 WIZO95785 1651 aa21.63■■□□□ 1.05
BRD3-206ENST00000494743 ATAD2BQ9ULI0 1458 aa21.63■■□□□ 1.05
BRD3-206ENST00000494743 SMARCA2P51531 1590 aa21.59■■□□□ 1.05
BRD3-206ENST00000494743 CUX2O14529 1486 aa21.57■■□□□ 1.04
BRD3-206ENST00000494743 NCAPD3P42695 1498 aa21.52■■□□□ 1.03
BRD3-206ENST00000494743 TOP2AP11388 1531 aaKnown RBP21.48■■□□□ 1.03
BRD3-206ENST00000494743 HMGXB3Q12766 1538 aa21.46■■□□□ 1.03
BRD3-206ENST00000494743 BAZ1BQ9UIG0 1483 aaKnown RBP21.45■■□□□ 1.02
BRD3-206ENST00000494743 ERCC6Q03468 1493 aa21.31■■□□□ 1
BRD3-206ENST00000494743 CCDC88BA6NC98 1476 aa21.22■□□□□ 0.99
BRD3-206ENST00000494743 TRIM41Q8WV44 630 aa21.18■□□□□ 0.98
BRD3-206ENST00000494743 CFTRP13569 1480 aa20.94■□□□□ 0.94
BRD3-206ENST00000494743 CADPSQ9ULU8 1353 aa20.91■□□□□ 0.94
BRD3-206ENST00000494743 NESP48681 1621 aa20.89■□□□□ 0.94
BRD3-206ENST00000494743 THOC2Q8NI27 1593 aaKnown RBP20.89■□□□□ 0.94
BRD3-206ENST00000494743 LAMC3Q9Y6N6 1575 aa20.82■□□□□ 0.92
BRD3-206ENST00000494743 PRDM2Q13029 1718 aa20.72■□□□□ 0.91
BRD3-206ENST00000494743 FANCD2Q9BXW9 1451 aa20.67■□□□□ 0.9
BRD3-206ENST00000494743 PDS5BQ9NTI5 1447 aa20.66■□□□□ 0.9
BRD3-206ENST00000494743 KIF21AQ7Z4S6 1674 aa20.65■□□□□ 0.9
BRD3-206ENST00000494743 CHIC1Q5VXU3 224 aa20.64■□□□□ 0.89
BRD3-206ENST00000494743 ABCC8Q09428 1581 aa20.62■□□□□ 0.89
BRD3-206ENST00000494743 CEP164Q9UPV0 1460 aa20.57■□□□□ 0.88
BRD3-206ENST00000494743 WRNQ14191 1432 aaPredicted RBP eCLIP20.57■□□□□ 0.88
BRD3-206ENST00000494743 SYNJ1O43426 1573 aa20.51■□□□□ 0.87
BRD3-206ENST00000494743 CUX1P39880 1505 aa20.5■□□□□ 0.87
BRD3-206ENST00000494743 TOP2BQ02880 1626 aa20.46■□□□□ 0.87
BRD3-206ENST00000494743 BIVM-ERCC5R4GMW8 1640 aa20.45■□□□□ 0.86
BRD3-206ENST00000494743 URB2Q14146 1524 aaKnown RBP20.44■□□□□ 0.86
BRD3-206ENST00000494743 DNMBPQ6XZF7 1577 aa20.42■□□□□ 0.86
BRD3-206ENST00000494743 MRC2Q9UBG0 1479 aa20.42■□□□□ 0.86
BRD3-206ENST00000494743 TOPBP1Q92547 1522 aa20.41■□□□□ 0.86
BRD3-206ENST00000494743 WDR62O43379 1518 aa20.38■□□□□ 0.85
BRD3-206ENST00000494743 OSCARQ8IYS5 282 aa20.38■□□□□ 0.85
BRD3-206ENST00000494743 FGD5Q6ZNL6 1462 aa20.31■□□□□ 0.84
BRD3-206ENST00000494743 RIMBP3CA6NJZ7 1639 aa20.3■□□□□ 0.84
BRD3-206ENST00000494743 RIMBP3BA6NNM3 1639 aa20.3■□□□□ 0.84
BRD3-206ENST00000494743 RIMBP3Q9UFD9 1639 aa20.3■□□□□ 0.84
BRD3-206ENST00000494743 POLA1P09884 1462 aaPredicted RBP20.29■□□□□ 0.84
BRD3-206ENST00000494743 RAD54L2Q9Y4B4 1467 aa20.18■□□□□ 0.82
BRD3-206ENST00000494743 SOGA1O94964 1423 aa20.18■□□□□ 0.82
BRD3-206ENST00000494743 ABCA10Q8WWZ4 1543 aa20.16■□□□□ 0.82
BRD3-206ENST00000494743 TARBP1Q13395 1621 aaKnown RBP20.14■□□□□ 0.81
BRD3-206ENST00000494743 ARHGEF11O15085 1522 aa20.12■□□□□ 0.81
BRD3-206ENST00000494743 IFT140Q96RY7 1462 aa20.12■□□□□ 0.81
BRD3-206ENST00000494743 AEBP2Q6ZN18 517 aaPredicted RBP20.12■□□□□ 0.81
BRD3-206ENST00000494743 WDR97A6NE52 1622 aa20.11■□□□□ 0.81
BRD3-206ENST00000494743 RUSC2Q8N2Y8 1516 aa20.11■□□□□ 0.81
BRD3-206ENST00000494743 EEA1Q15075 1411 aa20.1■□□□□ 0.81
BRD3-206ENST00000494743 KIF27Q86VH2 1401 aa20.08■□□□□ 0.8
BRD3-206ENST00000494743 TRHP20396 242 aaPredicted RBP20.05■□□□□ 0.8
BRD3-206ENST00000494743 ABCA5Q8WWZ7 1642 aa20.02■□□□□ 0.8
BRD3-206ENST00000494743 FAM9AQ8IZU1 332 aaPredicted RBP20.01■□□□□ 0.79
BRD3-206ENST00000494743 TDRD9Q8NDG6 1382 aaKnown RBP20■□□□□ 0.79
BRD3-206ENST00000494743 ZNF608Q9ULD9 1512 aaPredicted RBP20■□□□□ 0.79
BRD3-206ENST00000494743 CYB5RLQ6IPT4 315 aa19.98■□□□□ 0.79
BRD3-206ENST00000494743 GAPVD1Q14C86 1478 aa19.97■□□□□ 0.79
BRD3-206ENST00000494743 CSRNP3Q8WYN3 585 aa19.96■□□□□ 0.79
BRD3-206ENST00000494743 IGF1RP08069 1367 aa19.95■□□□□ 0.79
BRD3-206ENST00000494743 AQRO60306 1485 aaKnown RBP eCLIP19.94■□□□□ 0.786e-8■■■■■ 27.6
BRD3-206ENST00000494743 EIF4G3O43432 1585 aaKnown RBP19.93■□□□□ 0.78
BRD3-206ENST00000494743 ERICH3Q5RHP9 1530 aa19.92■□□□□ 0.78
BRD3-206ENST00000494743 PRXQ9BXM0 1461 aa19.9■□□□□ 0.78
BRD3-206ENST00000494743 GRIN2BQ13224 1484 aa19.88■□□□□ 0.77
BRD3-206ENST00000494743 ARAP1Q96P48 1450 aa19.86■□□□□ 0.77
BRD3-206ENST00000494743 KIF21BO75037 1637 aa19.85■□□□□ 0.77
BRD3-206ENST00000494743 PBRM1Q86U86 1689 aa19.84■□□□□ 0.77
BRD3-206ENST00000494743 CUL7Q14999 1698 aa19.82■□□□□ 0.76
BRD3-206ENST00000494743 CARMIL1Q5VZK9 1371 aa19.82■□□□□ 0.76
BRD3-206ENST00000494743 RAPGEF2Q9Y4G8 1499 aa19.79■□□□□ 0.76
BRD3-206ENST00000494743 GOLGA3Q08378 1498 aa19.79■□□□□ 0.76
BRD3-206ENST00000494743 SNAPC4Q5SXM2 1469 aa19.79■□□□□ 0.76
BRD3-206ENST00000494743 ADAMTS12P58397 1594 aa19.78■□□□□ 0.76
BRD3-206ENST00000494743 LOC105371045A0A1W2PR82 267 aa19.77■□□□□ 0.76
BRD3-206ENST00000494743 MAGI1Q96QZ7 1491 aaPredicted RBP19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms