RNA–Protein interactions for RNA: ENST00000493752.5

ABCD4-216, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 719 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-216ENST00000493752 NISCHQ9Y2I1 1504 aa19.25■□□□□ 0.67
ABCD4-216ENST00000493752 CCDC180Q9P1Z9 1646 aa16.93■□□□□ 0.3
ABCD4-216ENST00000493752 ABCC9O60706 1549 aa16.47■□□□□ 0.23
ABCD4-216ENST00000493752 DCAF8L2P0C7V8 631 aa16.11■□□□□ 0.17
ABCD4-216ENST00000493752 ZCCHC6Q5VYS8 1495 aaKnown RBP16.06■□□□□ 0.16
ABCD4-216ENST00000493752 MYO15BQ96JP2 1530 aa15.96■□□□□ 0.15
ABCD4-216ENST00000493752 NACADO15069 1562 aa15.96■□□□□ 0.14
ABCD4-216ENST00000493752 DCAF1Q9Y4B6 1507 aa15.95■□□□□ 0.14
ABCD4-216ENST00000493752 RB1CC1Q8TDY2 1594 aa15.9■□□□□ 0.14
ABCD4-216ENST00000493752 PABPN1Q86U42 306 aaKnown RBP eCLIP15.5■□□□□ 0.07
ABCD4-216ENST00000493752 SCRIBQ14160 1630 aa15.48■□□□□ 0.07
ABCD4-216ENST00000493752 BICRAQ9NZM4 1560 aa15.4■□□□□ 0.06
ABCD4-216ENST00000493752 UNC13AQ9UPW8 1703 aa15.4■□□□□ 0.06
ABCD4-216ENST00000493752 SHROOM4Q9ULL8 1493 aa15.34■□□□□ 0.05
ABCD4-216ENST00000493752 DNAJC5BQ9UF47 199 aa15.05■□□□□ -0
ABCD4-216ENST00000493752 CECR2Q9BXF3 1484 aa14.99□□□□□ -0.01
ABCD4-216ENST00000493752 EIF4G1Q04637 1599 aaKnown RBP14.98□□□□□ -0.01
ABCD4-216ENST00000493752 BAZ1AQ9NRL2 1556 aaPredicted RBP14.9□□□□□ -0.02
ABCD4-216ENST00000493752 CC2D2AQ9P2K1 1620 aa14.86□□□□□ -0.03
ABCD4-216ENST00000493752 SMARCA4P51532 1647 aa14.84□□□□□ -0.03
ABCD4-216ENST00000493752 MROH2BQ7Z745 1585 aa14.83□□□□□ -0.04
ABCD4-216ENST00000493752 RSF1Q96T23 1441 aaPredicted RBP14.79□□□□□ -0.04
ABCD4-216ENST00000493752 ATAD2BQ9ULI0 1458 aa14.79□□□□□ -0.04
ABCD4-216ENST00000493752 NCAPD3P42695 1498 aa14.78□□□□□ -0.04
ABCD4-216ENST00000493752 SMARCA2P51531 1590 aa14.75□□□□□ -0.05
ABCD4-216ENST00000493752 PEG3Q9GZU2 1588 aa14.73□□□□□ -0.05
ABCD4-216ENST00000493752 BAZ1BQ9UIG0 1483 aaKnown RBP14.66□□□□□ -0.06
ABCD4-216ENST00000493752 HMGXB3Q12766 1538 aa14.65□□□□□ -0.06
ABCD4-216ENST00000493752 WIZO95785 1651 aa14.62□□□□□ -0.07
ABCD4-216ENST00000493752 SUPT5HO00267 1087 aaKnown RBP14.6□□□□□ -0.07
ABCD4-216ENST00000493752 TOP2AP11388 1531 aaKnown RBP14.51□□□□□ -0.09
ABCD4-216ENST00000493752 CCDC88BA6NC98 1476 aa14.4□□□□□ -0.1
ABCD4-216ENST00000493752 CADPSQ9ULU8 1353 aa14.37□□□□□ -0.11
ABCD4-216ENST00000493752 CFTRP13569 1480 aa14.3□□□□□ -0.12
ABCD4-216ENST00000493752 NESP48681 1621 aa14.3□□□□□ -0.12
ABCD4-216ENST00000493752 DNAJC5Q9H3Z4 198 aa14.28□□□□□ -0.12
ABCD4-216ENST00000493752 LAMC3Q9Y6N6 1575 aa14.28□□□□□ -0.12
ABCD4-216ENST00000493752 PDS5BQ9NTI5 1447 aa14.25□□□□□ -0.13
ABCD4-216ENST00000493752 ERCC6Q03468 1493 aa14.18□□□□□ -0.14
ABCD4-216ENST00000493752 FANCD2Q9BXW9 1451 aa14.15□□□□□ -0.14
ABCD4-216ENST00000493752 CEP164Q9UPV0 1460 aa14.1□□□□□ -0.15
ABCD4-216ENST00000493752 MRC2Q9UBG0 1479 aa14.05□□□□□ -0.16
ABCD4-216ENST00000493752 KIF21AQ7Z4S6 1674 aa14.03□□□□□ -0.16
ABCD4-216ENST00000493752 PRDM2Q13029 1718 aa14□□□□□ -0.17
ABCD4-216ENST00000493752 ABCC8Q09428 1581 aa13.99□□□□□ -0.17
ABCD4-216ENST00000493752 URB2Q14146 1524 aaKnown RBP13.98□□□□□ -0.17
ABCD4-216ENST00000493752 WDR62O43379 1518 aa13.97□□□□□ -0.17
ABCD4-216ENST00000493752 CUX2O14529 1486 aa13.97□□□□□ -0.17
ABCD4-216ENST00000493752 THOC2Q8NI27 1593 aaKnown RBP13.96□□□□□ -0.17
ABCD4-216ENST00000493752 TOPBP1Q92547 1522 aa13.94□□□□□ -0.18
ABCD4-216ENST00000493752 WRNQ14191 1432 aaPredicted RBP eCLIP13.93□□□□□ -0.18
ABCD4-216ENST00000493752 DNMBPQ6XZF7 1577 aa13.91□□□□□ -0.18
ABCD4-216ENST00000493752 CUX1P39880 1505 aa13.9□□□□□ -0.19
ABCD4-216ENST00000493752 SOGA1O94964 1423 aa13.84□□□□□ -0.19
ABCD4-216ENST00000493752 POLA1P09884 1462 aaPredicted RBP13.83□□□□□ -0.2
ABCD4-216ENST00000493752 IFT140Q96RY7 1462 aa13.83□□□□□ -0.2
ABCD4-216ENST00000493752 FGD5Q6ZNL6 1462 aa13.82□□□□□ -0.2
ABCD4-216ENST00000493752 TOP2BQ02880 1626 aa13.81□□□□□ -0.2
ABCD4-216ENST00000493752 SYNJ1O43426 1573 aa13.8□□□□□ -0.2
ABCD4-216ENST00000493752 TRIM41Q8WV44 630 aa13.8□□□□□ -0.2
ABCD4-216ENST00000493752 AEBP2Q6ZN18 517 aaPredicted RBP13.79□□□□□ -0.2
ABCD4-216ENST00000493752 RAD54L2Q9Y4B4 1467 aa13.79□□□□□ -0.2
ABCD4-216ENST00000493752 BIVM-ERCC5R4GMW8 1640 aa13.76□□□□□ -0.21
ABCD4-216ENST00000493752 CHIC1Q5VXU3 224 aa13.76□□□□□ -0.21
ABCD4-216ENST00000493752 TDRD9Q8NDG6 1382 aaKnown RBP13.73□□□□□ -0.21
ABCD4-216ENST00000493752 TARBP1Q13395 1621 aaKnown RBP13.73□□□□□ -0.21
ABCD4-216ENST00000493752 ZNF608Q9ULD9 1512 aaPredicted RBP13.73□□□□□ -0.21
ABCD4-216ENST00000493752 ABCA10Q8WWZ4 1543 aa13.72□□□□□ -0.21
ABCD4-216ENST00000493752 AQRO60306 1485 aaKnown RBP eCLIP13.71□□□□□ -0.21
ABCD4-216ENST00000493752 GAPVD1Q14C86 1478 aa13.65□□□□□ -0.22
ABCD4-216ENST00000493752 WDR97A6NE52 1622 aa13.64□□□□□ -0.23
ABCD4-216ENST00000493752 KIF27Q86VH2 1401 aa13.64□□□□□ -0.23
ABCD4-216ENST00000493752 GRIN2BQ13224 1484 aa13.62□□□□□ -0.23
ABCD4-216ENST00000493752 EIF4G3O43432 1585 aaKnown RBP13.6□□□□□ -0.23
ABCD4-216ENST00000493752 IGF1RP08069 1367 aa13.59□□□□□ -0.23
ABCD4-216ENST00000493752 ABCA5Q8WWZ7 1642 aa13.57□□□□□ -0.24
ABCD4-216ENST00000493752 CHMP7Q8WUX9 453 aaPredicted RBP13.56□□□□□ -0.24
ABCD4-216ENST00000493752 MAGI1Q96QZ7 1491 aaPredicted RBP13.55□□□□□ -0.24
ABCD4-216ENST00000493752 SNAPC4Q5SXM2 1469 aa13.55□□□□□ -0.24
ABCD4-216ENST00000493752 ERICH3Q5RHP9 1530 aa13.54□□□□□ -0.24
ABCD4-216ENST00000493752 FBLN2P98095 1184 aa13.54□□□□□ -0.24
ABCD4-216ENST00000493752 RUSC2Q8N2Y8 1516 aa13.54□□□□□ -0.24
ABCD4-216ENST00000493752 OSCARQ8IYS5 282 aa13.53□□□□□ -0.24
ABCD4-216ENST00000493752 CSRNP3Q8WYN3 585 aa13.52□□□□□ -0.25
ABCD4-216ENST00000493752 FHAD1B1AJZ9 1412 aa13.52□□□□□ -0.25
ABCD4-216ENST00000493752 EEA1Q15075 1411 aa13.51□□□□□ -0.25
ABCD4-216ENST00000493752 SYNJ2O15056 1496 aa13.5□□□□□ -0.25
ABCD4-216ENST00000493752 CARMIL1Q5VZK9 1371 aa13.5□□□□□ -0.25
ABCD4-216ENST00000493752 FAM9AQ8IZU1 332 aaPredicted RBP13.48□□□□□ -0.25
ABCD4-216ENST00000493752 PBRM1Q86U86 1689 aa13.46□□□□□ -0.26
ABCD4-216ENST00000493752 ADAMTS12P58397 1594 aa13.43□□□□□ -0.26
ABCD4-216ENST00000493752 GRIN2AQ12879 1464 aa13.42□□□□□ -0.26
ABCD4-216ENST00000493752 PRXQ9BXM0 1461 aa13.42□□□□□ -0.26
ABCD4-216ENST00000493752 RAPGEF2Q9Y4G8 1499 aa13.41□□□□□ -0.26
ABCD4-216ENST00000493752 CUL7Q14999 1698 aa13.4□□□□□ -0.26
ABCD4-216ENST00000493752 NUP160Q12769 1436 aa13.38□□□□□ -0.27
ABCD4-216ENST00000493752 CHD1O14646 1710 aa13.35□□□□□ -0.27
ABCD4-216ENST00000493752 JPH4Q96JJ6 628 aa13.32□□□□□ -0.28
ABCD4-216ENST00000493752 KIAA0586Q9BVV6 1533 aa13.32□□□□□ -0.28
ABCD4-216ENST00000493752 CEP170Q5SW79 1584 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms