RNA–Protein interactions for RNA: ENST00000493647.1

RHBDF1-211, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 935 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-211ENST00000493647 NISCHQ9Y2I1 1504 aa28.98■■■□□ 2.23
RHBDF1-211ENST00000493647 CCDC180Q9P1Z9 1646 aa25.55■■□□□ 1.68
RHBDF1-211ENST00000493647 ABCC9O60706 1549 aa24.8■■□□□ 1.56
RHBDF1-211ENST00000493647 ZCCHC6Q5VYS8 1495 aaKnown RBP24.21■■□□□ 1.47
RHBDF1-211ENST00000493647 DCAF8L2P0C7V8 631 aa24.07■■□□□ 1.44
RHBDF1-211ENST00000493647 NACADO15069 1562 aa23.97■■□□□ 1.43
RHBDF1-211ENST00000493647 DCAF1Q9Y4B6 1507 aa23.96■■□□□ 1.43
RHBDF1-211ENST00000493647 MYO15BQ96JP2 1530 aa23.94■■□□□ 1.42
RHBDF1-211ENST00000493647 RB1CC1Q8TDY2 1594 aa23.91■■□□□ 1.42
RHBDF1-211ENST00000493647 SCRIBQ14160 1630 aa23.41■■□□□ 1.34
RHBDF1-211ENST00000493647 UNC13AQ9UPW8 1703 aa23.36■■□□□ 1.33
RHBDF1-211ENST00000493647 PABPN1Q86U42 306 aaKnown RBP eCLIP23.26■■□□□ 1.31
RHBDF1-211ENST00000493647 BICRAQ9NZM4 1560 aa23.26■■□□□ 1.31
RHBDF1-211ENST00000493647 SHROOM4Q9ULL8 1493 aa23.11■■□□□ 1.29
RHBDF1-211ENST00000493647 CECR2Q9BXF3 1484 aa22.6■■□□□ 1.21
RHBDF1-211ENST00000493647 EIF4G1Q04637 1599 aaKnown RBP22.59■■□□□ 1.21
RHBDF1-211ENST00000493647 DNAJC5BQ9UF47 199 aa22.55■■□□□ 1.2
RHBDF1-211ENST00000493647 CC2D2AQ9P2K1 1620 aa22.41■■□□□ 1.18
RHBDF1-211ENST00000493647 SMARCA4P51532 1647 aa22.4■■□□□ 1.18
RHBDF1-211ENST00000493647 BAZ1AQ9NRL2 1556 aaPredicted RBP22.4■■□□□ 1.18
RHBDF1-211ENST00000493647 MROH2BQ7Z745 1585 aa22.37■■□□□ 1.17
RHBDF1-211ENST00000493647 ATAD2BQ9ULI0 1458 aa22.23■■□□□ 1.15
RHBDF1-211ENST00000493647 RSF1Q96T23 1441 aaPredicted RBP22.23■■□□□ 1.15
RHBDF1-211ENST00000493647 PEG3Q9GZU2 1588 aa22.17■■□□□ 1.14
RHBDF1-211ENST00000493647 SMARCA2P51531 1590 aa22.16■■□□□ 1.14
RHBDF1-211ENST00000493647 NCAPD3P42695 1498 aa22.16■■□□□ 1.14
RHBDF1-211ENST00000493647 WIZO95785 1651 aa22.11■■□□□ 1.13
RHBDF1-211ENST00000493647 HMGXB3Q12766 1538 aa22.06■■□□□ 1.12
RHBDF1-211ENST00000493647 BAZ1BQ9UIG0 1483 aaKnown RBP22.03■■□□□ 1.12
RHBDF1-211ENST00000493647 TOP2AP11388 1531 aaKnown RBP21.89■■□□□ 1.09
RHBDF1-211ENST00000493647 SUPT5HO00267 1087 aaKnown RBP21.88■■□□□ 1.09
RHBDF1-211ENST00000493647 CCDC88BA6NC98 1476 aa21.65■■□□□ 1.06
RHBDF1-211ENST00000493647 NESP48681 1621 aa21.58■■□□□ 1.04
RHBDF1-211ENST00000493647 CADPSQ9ULU8 1353 aa21.53■■□□□ 1.04
RHBDF1-211ENST00000493647 LAMC3Q9Y6N6 1575 aa21.48■■□□□ 1.03
RHBDF1-211ENST00000493647 CFTRP13569 1480 aa21.47■■□□□ 1.03
RHBDF1-211ENST00000493647 PDS5BQ9NTI5 1447 aa21.33■■□□□ 1.01
RHBDF1-211ENST00000493647 ERCC6Q03468 1493 aa21.3■■□□□ 1
RHBDF1-211ENST00000493647 FANCD2Q9BXW9 1451 aa21.28■■□□□ 1
RHBDF1-211ENST00000493647 KIF21AQ7Z4S6 1674 aa21.25■□□□□ 0.99
RHBDF1-211ENST00000493647 PRDM2Q13029 1718 aa21.22■□□□□ 0.99
RHBDF1-211ENST00000493647 CEP164Q9UPV0 1460 aa21.2■□□□□ 0.98
RHBDF1-211ENST00000493647 THOC2Q8NI27 1593 aaKnown RBP21.14■□□□□ 0.97
RHBDF1-211ENST00000493647 MRC2Q9UBG0 1479 aa21.13■□□□□ 0.97
RHBDF1-211ENST00000493647 URB2Q14146 1524 aaKnown RBP21.09■□□□□ 0.97
RHBDF1-211ENST00000493647 WDR62O43379 1518 aa21.04■□□□□ 0.96
RHBDF1-211ENST00000493647 TOPBP1Q92547 1522 aa20.99■□□□□ 0.95
RHBDF1-211ENST00000493647 CUX2O14529 1486 aa20.97■□□□□ 0.95
RHBDF1-211ENST00000493647 CUX1P39880 1505 aa20.96■□□□□ 0.95
RHBDF1-211ENST00000493647 ABCC8Q09428 1581 aa20.96■□□□□ 0.95
RHBDF1-211ENST00000493647 DNMBPQ6XZF7 1577 aa20.96■□□□□ 0.95
RHBDF1-211ENST00000493647 WRNQ14191 1432 aaPredicted RBP eCLIP20.91■□□□□ 0.94
RHBDF1-211ENST00000493647 SYNJ1O43426 1573 aa20.86■□□□□ 0.93
RHBDF1-211ENST00000493647 POLA1P09884 1462 aaPredicted RBP20.83■□□□□ 0.93
RHBDF1-211ENST00000493647 FGD5Q6ZNL6 1462 aa20.82■□□□□ 0.92
RHBDF1-211ENST00000493647 TOP2BQ02880 1626 aa20.82■□□□□ 0.92
RHBDF1-211ENST00000493647 BIVM-ERCC5R4GMW8 1640 aa20.8■□□□□ 0.92
RHBDF1-211ENST00000493647 RAD54L2Q9Y4B4 1467 aa20.76■□□□□ 0.91
RHBDF1-211ENST00000493647 IFT140Q96RY7 1462 aa20.75■□□□□ 0.91
RHBDF1-211ENST00000493647 SOGA1O94964 1423 aa20.74■□□□□ 0.91
RHBDF1-211ENST00000493647 TARBP1Q13395 1621 aaKnown RBP20.72■□□□□ 0.91
RHBDF1-211ENST00000493647 ZNF608Q9ULD9 1512 aaPredicted RBP20.68■□□□□ 0.9
RHBDF1-211ENST00000493647 CHIC1Q5VXU3 224 aa20.63■□□□□ 0.89
RHBDF1-211ENST00000493647 ABCA10Q8WWZ4 1543 aa20.63■□□□□ 0.89
RHBDF1-211ENST00000493647 TDRD9Q8NDG6 1382 aaKnown RBP20.61■□□□□ 0.89
RHBDF1-211ENST00000493647 TRIM41Q8WV44 630 aa20.61■□□□□ 0.89
RHBDF1-211ENST00000493647 WDR97A6NE52 1622 aa20.6■□□□□ 0.89
RHBDF1-211ENST00000493647 AQRO60306 1485 aaKnown RBP eCLIP20.6■□□□□ 0.896e-7■□□□□ 10.4
RHBDF1-211ENST00000493647 EIF4G3O43432 1585 aaKnown RBP20.56■□□□□ 0.88
RHBDF1-211ENST00000493647 ABCA5Q8WWZ7 1642 aa20.5■□□□□ 0.87
RHBDF1-211ENST00000493647 GAPVD1Q14C86 1478 aa20.5■□□□□ 0.87
RHBDF1-211ENST00000493647 GRIN2BQ13224 1484 aa20.45■□□□□ 0.86
RHBDF1-211ENST00000493647 KIF27Q86VH2 1401 aa20.43■□□□□ 0.86
RHBDF1-211ENST00000493647 RUSC2Q8N2Y8 1516 aa20.42■□□□□ 0.86
RHBDF1-211ENST00000493647 SNAPC4Q5SXM2 1469 aa20.4■□□□□ 0.86
RHBDF1-211ENST00000493647 PBRM1Q86U86 1689 aa20.38■□□□□ 0.85
RHBDF1-211ENST00000493647 IGF1RP08069 1367 aa20.36■□□□□ 0.85
RHBDF1-211ENST00000493647 ERICH3Q5RHP9 1530 aa20.36■□□□□ 0.85
RHBDF1-211ENST00000493647 MAGI1Q96QZ7 1491 aaPredicted RBP20.35■□□□□ 0.85
RHBDF1-211ENST00000493647 ADAMTS12P58397 1594 aa20.29■□□□□ 0.84
RHBDF1-211ENST00000493647 SYNJ2O15056 1496 aa20.28■□□□□ 0.84
RHBDF1-211ENST00000493647 FHAD1B1AJZ9 1412 aa20.27■□□□□ 0.84
RHBDF1-211ENST00000493647 FBLN2P98095 1184 aa20.25■□□□□ 0.83
RHBDF1-211ENST00000493647 CHMP7Q8WUX9 453 aaPredicted RBP20.24■□□□□ 0.83
RHBDF1-211ENST00000493647 CARMIL1Q5VZK9 1371 aa20.22■□□□□ 0.83
RHBDF1-211ENST00000493647 EEA1Q15075 1411 aa20.22■□□□□ 0.83
RHBDF1-211ENST00000493647 FAM9AQ8IZU1 332 aaPredicted RBP20.22■□□□□ 0.83
RHBDF1-211ENST00000493647 CHD1O14646 1710 aa20.22■□□□□ 0.83
RHBDF1-211ENST00000493647 CUL7Q14999 1698 aa20.2■□□□□ 0.82
RHBDF1-211ENST00000493647 GRIN2AQ12879 1464 aa20.19■□□□□ 0.82
RHBDF1-211ENST00000493647 CSRNP3Q8WYN3 585 aa20.19■□□□□ 0.82
RHBDF1-211ENST00000493647 OSCARQ8IYS5 282 aa20.16■□□□□ 0.82
RHBDF1-211ENST00000493647 PRXQ9BXM0 1461 aa20.16■□□□□ 0.82
RHBDF1-211ENST00000493647 RAPGEF2Q9Y4G8 1499 aa20.11■□□□□ 0.81
RHBDF1-211ENST00000493647 NUP160Q12769 1436 aa20.11■□□□□ 0.81
RHBDF1-211ENST00000493647 CEP170Q5SW79 1584 aa20.09■□□□□ 0.81
RHBDF1-211ENST00000493647 CLASP1Q7Z460 1538 aa20.07■□□□□ 0.8
RHBDF1-211ENST00000493647 KIF21BO75037 1637 aa20.01■□□□□ 0.79
RHBDF1-211ENST00000493647 DNAJC5Q9H3Z4 198 aa20■□□□□ 0.79
RHBDF1-211ENST00000493647 KIAA0586Q9BVV6 1533 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms