RNA–Protein interactions for RNA: ENST00000492965.5

SSPO-209, Transcript of SCO-spondin, humanhuman

TSL 1 (best)

Gene SSPO, Length 1,506 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPO-209ENST00000492965 NISCHQ9Y2I1 1504 aa44.81■■■■■ 4.76
SSPO-209ENST00000492965 CCDC180Q9P1Z9 1646 aa39.61■■■■□ 3.93
SSPO-209ENST00000492965 ABCC9O60706 1549 aa38.77■■■■□ 3.8
SSPO-209ENST00000492965 DCAF8L2P0C7V8 631 aa37.67■■■■□ 3.62
SSPO-209ENST00000492965 ZCCHC6Q5VYS8 1495 aaKnown RBP37.36■■■■□ 3.57
SSPO-209ENST00000492965 RB1CC1Q8TDY2 1594 aa37.22■■■■□ 3.55
SSPO-209ENST00000492965 NACADO15069 1562 aa37.19■■■■□ 3.54
SSPO-209ENST00000492965 MYO15BQ96JP2 1530 aa36.92■■■■□ 3.5
SSPO-209ENST00000492965 DCAF1Q9Y4B6 1507 aa36.92■■■■□ 3.5
SSPO-209ENST00000492965 UNC13AQ9UPW8 1703 aa36.49■■■■□ 3.43
SSPO-209ENST00000492965 SCRIBQ14160 1630 aa36.41■■■■□ 3.42
SSPO-209ENST00000492965 PABPN1Q86U42 306 aaKnown RBP eCLIP36.37■■■■□ 3.41
SSPO-209ENST00000492965 BICRAQ9NZM4 1560 aa36.14■■■■□ 3.38
SSPO-209ENST00000492965 SHROOM4Q9ULL8 1493 aa35.9■■■■□ 3.34
SSPO-209ENST00000492965 DNAJC5BQ9UF47 199 aa35.38■■■■□ 3.25
SSPO-209ENST00000492965 EIF4G1Q04637 1599 aaKnown RBP35.16■■■■□ 3.22
SSPO-209ENST00000492965 CECR2Q9BXF3 1484 aa35.01■■■■□ 3.19
SSPO-209ENST00000492965 CC2D2AQ9P2K1 1620 aa35■■■■□ 3.19
SSPO-209ENST00000492965 SMARCA4P51532 1647 aa34.73■■■■□ 3.15
SSPO-209ENST00000492965 BAZ1AQ9NRL2 1556 aaPredicted RBP34.68■■■■□ 3.14
SSPO-209ENST00000492965 MROH2BQ7Z745 1585 aa34.63■■■■□ 3.13
SSPO-209ENST00000492965 ATAD2BQ9ULI0 1458 aa34.47■■■■□ 3.11
SSPO-209ENST00000492965 SMARCA2P51531 1590 aa34.38■■■■□ 3.09
SSPO-209ENST00000492965 NCAPD3P42695 1498 aa34.34■■■■□ 3.09
SSPO-209ENST00000492965 WIZO95785 1651 aa34.31■■■■□ 3.08
SSPO-209ENST00000492965 RSF1Q96T23 1441 aaPredicted RBP34.29■■■■□ 3.08
SSPO-209ENST00000492965 PEG3Q9GZU2 1588 aa34.25■■■■□ 3.07
SSPO-209ENST00000492965 BAZ1BQ9UIG0 1483 aaKnown RBP34.23■■■■□ 3.07
SSPO-209ENST00000492965 HMGXB3Q12766 1538 aa34.17■■■■□ 3.06
SSPO-209ENST00000492965 SUPT5HO00267 1087 aaKnown RBP33.89■■■■□ 3.02
SSPO-209ENST00000492965 TOP2AP11388 1531 aaKnown RBP33.83■■■■□ 3.01
SSPO-209ENST00000492965 NESP48681 1621 aa33.64■■■□□ 2.98
SSPO-209ENST00000492965 CCDC88BA6NC98 1476 aa33.51■■■□□ 2.96
SSPO-209ENST00000492965 CADPSQ9ULU8 1353 aa33.41■■■□□ 2.94
SSPO-209ENST00000492965 LAMC3Q9Y6N6 1575 aa33.39■■■□□ 2.94
SSPO-209ENST00000492965 ERCC6Q03468 1493 aa33.35■■■□□ 2.93
SSPO-209ENST00000492965 CFTRP13569 1480 aa33.24■■■□□ 2.91
SSPO-209ENST00000492965 KIF21AQ7Z4S6 1674 aa33.2■■■□□ 2.9
SSPO-209ENST00000492965 PDS5BQ9NTI5 1447 aa33.19■■■□□ 2.9
SSPO-209ENST00000492965 FANCD2Q9BXW9 1451 aa33.07■■■□□ 2.88
SSPO-209ENST00000492965 PRDM2Q13029 1718 aa33.01■■■□□ 2.87
SSPO-209ENST00000492965 CEP164Q9UPV0 1460 aa32.98■■■□□ 2.87
SSPO-209ENST00000492965 THOC2Q8NI27 1593 aaKnown RBP32.93■■■□□ 2.86
SSPO-209ENST00000492965 MRC2Q9UBG0 1479 aa32.85■■■□□ 2.85
SSPO-209ENST00000492965 URB2Q14146 1524 aaKnown RBP32.74■■■□□ 2.83
SSPO-209ENST00000492965 CUX2O14529 1486 aa32.72■■■□□ 2.83
SSPO-209ENST00000492965 WDR62O43379 1518 aa32.7■■■□□ 2.83
SSPO-209ENST00000492965 TOPBP1Q92547 1522 aa32.57■■■□□ 2.8
SSPO-209ENST00000492965 DNMBPQ6XZF7 1577 aa32.51■■■□□ 2.79
SSPO-209ENST00000492965 ABCC8Q09428 1581 aa32.47■■■□□ 2.79
SSPO-209ENST00000492965 CUX1P39880 1505 aa32.45■■■□□ 2.78
SSPO-209ENST00000492965 WRNQ14191 1432 aaPredicted RBP eCLIP32.32■■■□□ 2.77
SSPO-209ENST00000492965 POLA1P09884 1462 aaPredicted RBP32.31■■■□□ 2.76
SSPO-209ENST00000492965 FGD5Q6ZNL6 1462 aa32.3■■■□□ 2.76
SSPO-209ENST00000492965 SYNJ1O43426 1573 aa32.28■■■□□ 2.76
SSPO-209ENST00000492965 RAD54L2Q9Y4B4 1467 aa32.27■■■□□ 2.76
SSPO-209ENST00000492965 IFT140Q96RY7 1462 aa32.23■■■□□ 2.75
SSPO-209ENST00000492965 SOGA1O94964 1423 aa32.21■■■□□ 2.75
SSPO-209ENST00000492965 ZNF608Q9ULD9 1512 aaPredicted RBP32.2■■■□□ 2.75
SSPO-209ENST00000492965 TOP2BQ02880 1626 aa32.18■■■□□ 2.74
SSPO-209ENST00000492965 TARBP1Q13395 1621 aaKnown RBP32.16■■■□□ 2.74
SSPO-209ENST00000492965 BIVM-ERCC5R4GMW8 1640 aa32.16■■■□□ 2.74
SSPO-209ENST00000492965 AQRO60306 1485 aaKnown RBP eCLIP32.07■■■□□ 2.72
SSPO-209ENST00000492965 TDRD9Q8NDG6 1382 aaKnown RBP32.07■■■□□ 2.72
SSPO-209ENST00000492965 EIF4G3O43432 1585 aaKnown RBP32.02■■■□□ 2.72
SSPO-209ENST00000492965 WDR97A6NE52 1622 aa31.95■■■□□ 2.7
SSPO-209ENST00000492965 ABCA10Q8WWZ4 1543 aa31.91■■■□□ 2.7
SSPO-209ENST00000492965 TRIM41Q8WV44 630 aa31.87■■■□□ 2.69
SSPO-209ENST00000492965 GAPVD1Q14C86 1478 aa31.82■■■□□ 2.68
SSPO-209ENST00000492965 ABCA5Q8WWZ7 1642 aa31.78■■■□□ 2.68
SSPO-209ENST00000492965 PBRM1Q86U86 1689 aa31.75■■■□□ 2.67
SSPO-209ENST00000492965 FBLN2P98095 1184 aa31.75■■■□□ 2.67
SSPO-209ENST00000492965 GRIN2BQ13224 1484 aa31.74■■■□□ 2.67
SSPO-209ENST00000492965 SNAPC4Q5SXM2 1469 aa31.73■■■□□ 2.67
SSPO-209ENST00000492965 CHIC1Q5VXU3 224 aa31.67■■■□□ 2.66
SSPO-209ENST00000492965 CHD1O14646 1710 aa31.61■■■□□ 2.65
SSPO-209ENST00000492965 KIF27Q86VH2 1401 aa31.61■■■□□ 2.65
SSPO-209ENST00000492965 CHMP7Q8WUX9 453 aaPredicted RBP31.59■■■□□ 2.65
SSPO-209ENST00000492965 MAGI1Q96QZ7 1491 aaPredicted RBP31.57■■■□□ 2.65
SSPO-209ENST00000492965 RUSC2Q8N2Y8 1516 aa31.57■■■□□ 2.65
SSPO-209ENST00000492965 OSCARQ8IYS5 282 aa31.56■■■□□ 2.64
SSPO-209ENST00000492965 DNAJC5Q9H3Z4 198 aa31.52■■■□□ 2.64
SSPO-209ENST00000492965 ERICH3Q5RHP9 1530 aa31.51■■■□□ 2.63
SSPO-209ENST00000492965 SYNJ2O15056 1496 aa31.49■■■□□ 2.63
SSPO-209ENST00000492965 IGF1RP08069 1367 aa31.48■■■□□ 2.63
SSPO-209ENST00000492965 ADAMTS12P58397 1594 aa31.47■■■□□ 2.63
SSPO-209ENST00000492965 FHAD1B1AJZ9 1412 aa31.42■■■□□ 2.62
SSPO-209ENST00000492965 FAM9AQ8IZU1 332 aaPredicted RBP31.39■■■□□ 2.62
SSPO-209ENST00000492965 GRIN2AQ12879 1464 aa31.35■■■□□ 2.61
SSPO-209ENST00000492965 CARMIL1Q5VZK9 1371 aa31.31■■■□□ 2.6
SSPO-209ENST00000492965 CUL7Q14999 1698 aa31.29■■■□□ 2.6
SSPO-209ENST00000492965 CEP170Q5SW79 1584 aa31.22■■■□□ 2.59
SSPO-209ENST00000492965 CSRNP3Q8WYN3 585 aa31.19■■■□□ 2.58
SSPO-209ENST00000492965 CLASP1Q7Z460 1538 aa31.17■■■□□ 2.58
SSPO-209ENST00000492965 NUP160Q12769 1436 aa31.15■■■□□ 2.58
SSPO-209ENST00000492965 RAPGEF2Q9Y4G8 1499 aa31.12■■■□□ 2.57
SSPO-209ENST00000492965 EHMT2Q96KQ7 1210 aa31.11■■■□□ 2.57
SSPO-209ENST00000492965 EEA1Q15075 1411 aa31.08■■■□□ 2.57
SSPO-209ENST00000492965 PRXQ9BXM0 1461 aa31.04■■■□□ 2.56
SSPO-209ENST00000492965 ARHGEF11O15085 1522 aa31.03■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms