RNA–Protein interactions for RNA: ENST00000491974.1

SNHG28-202, Transcript of small nucleolar RNA host gene 28, humanhuman

TSL 2

Gene SNHG28, Length 1,064 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28-202ENST00000491974 NISCHQ9Y2I1 1504 aa39.23■■■■□ 3.87
SNHG28-202ENST00000491974 CCDC180Q9P1Z9 1646 aa34.55■■■■□ 3.12
SNHG28-202ENST00000491974 ABCC9O60706 1549 aa33.53■■■□□ 2.96
SNHG28-202ENST00000491974 ZCCHC6Q5VYS8 1495 aaKnown RBP32.75■■■□□ 2.83
SNHG28-202ENST00000491974 DCAF8L2P0C7V8 631 aa32.75■■■□□ 2.83
SNHG28-202ENST00000491974 NACADO15069 1562 aa32.49■■■□□ 2.79
SNHG28-202ENST00000491974 DCAF1Q9Y4B6 1507 aa32.46■■■□□ 2.79
SNHG28-202ENST00000491974 MYO15BQ96JP2 1530 aa32.45■■■□□ 2.78
SNHG28-202ENST00000491974 RB1CC1Q8TDY2 1594 aa32.4■■■□□ 2.78
SNHG28-202ENST00000491974 SCRIBQ14160 1630 aa31.63■■■□□ 2.65
SNHG28-202ENST00000491974 PABPN1Q86U42 306 aaKnown RBP eCLIP31.5■■■□□ 2.63
SNHG28-202ENST00000491974 UNC13AQ9UPW8 1703 aa31.48■■■□□ 2.63
SNHG28-202ENST00000491974 BICRAQ9NZM4 1560 aa31.38■■■□□ 2.61
SNHG28-202ENST00000491974 SHROOM4Q9ULL8 1493 aa31.33■■■□□ 2.61
SNHG28-202ENST00000491974 EIF4G1Q04637 1599 aaKnown RBP30.54■■■□□ 2.48
SNHG28-202ENST00000491974 CECR2Q9BXF3 1484 aa30.53■■■□□ 2.48
SNHG28-202ENST00000491974 DNAJC5BQ9UF47 199 aa30.45■■■□□ 2.47
SNHG28-202ENST00000491974 BAZ1AQ9NRL2 1556 aaPredicted RBP30.36■■■□□ 2.45
SNHG28-202ENST00000491974 SMARCA4P51532 1647 aa30.28■■■□□ 2.44
SNHG28-202ENST00000491974 CC2D2AQ9P2K1 1620 aa30.28■■■□□ 2.44
SNHG28-202ENST00000491974 MROH2BQ7Z745 1585 aa30.24■■■□□ 2.43
SNHG28-202ENST00000491974 RSF1Q96T23 1441 aaPredicted RBP30.11■■■□□ 2.41
SNHG28-202ENST00000491974 ATAD2BQ9ULI0 1458 aa30.1■■■□□ 2.41
SNHG28-202ENST00000491974 SMARCA2P51531 1590 aa30.04■■■□□ 2.4
SNHG28-202ENST00000491974 NCAPD3P42695 1498 aa30.03■■■□□ 2.4
SNHG28-202ENST00000491974 PEG3Q9GZU2 1588 aa29.99■■■□□ 2.39
SNHG28-202ENST00000491974 WIZO95785 1651 aa29.86■■■□□ 2.37
SNHG28-202ENST00000491974 BAZ1BQ9UIG0 1483 aaKnown RBP29.86■■■□□ 2.37
SNHG28-202ENST00000491974 HMGXB3Q12766 1538 aa29.84■■■□□ 2.37
SNHG28-202ENST00000491974 SUPT5HO00267 1087 aaKnown RBP29.76■■■□□ 2.35
SNHG28-202ENST00000491974 TOP2AP11388 1531 aaKnown RBP29.62■■■□□ 2.33
SNHG28-202ENST00000491974 CCDC88BA6NC98 1476 aa29.33■■■□□ 2.29
SNHG28-202ENST00000491974 CADPSQ9ULU8 1353 aa29.21■■■□□ 2.27
SNHG28-202ENST00000491974 NESP48681 1621 aa29.13■■■□□ 2.25
SNHG28-202ENST00000491974 CFTRP13569 1480 aa29.09■■■□□ 2.25
SNHG28-202ENST00000491974 LAMC3Q9Y6N6 1575 aa29.09■■■□□ 2.25
SNHG28-202ENST00000491974 PDS5BQ9NTI5 1447 aa28.97■■■□□ 2.23
SNHG28-202ENST00000491974 ERCC6Q03468 1493 aa28.88■■■□□ 2.21
SNHG28-202ENST00000491974 FANCD2Q9BXW9 1451 aa28.83■■■□□ 2.21
SNHG28-202ENST00000491974 CEP164Q9UPV0 1460 aa28.73■■■□□ 2.19
SNHG28-202ENST00000491974 KIF21AQ7Z4S6 1674 aa28.66■■■□□ 2.18
SNHG28-202ENST00000491974 PRDM2Q13029 1718 aa28.65■■■□□ 2.18
SNHG28-202ENST00000491974 MRC2Q9UBG0 1479 aa28.6■■■□□ 2.17
SNHG28-202ENST00000491974 THOC2Q8NI27 1593 aaKnown RBP28.5■■■□□ 2.15
SNHG28-202ENST00000491974 URB2Q14146 1524 aaKnown RBP28.48■■■□□ 2.15
SNHG28-202ENST00000491974 ABCC8Q09428 1581 aa28.45■■■□□ 2.14
SNHG28-202ENST00000491974 WDR62O43379 1518 aa28.44■■■□□ 2.14
SNHG28-202ENST00000491974 TOPBP1Q92547 1522 aa28.39■■■□□ 2.14
SNHG28-202ENST00000491974 CUX2O14529 1486 aa28.39■■■□□ 2.13
SNHG28-202ENST00000491974 DNMBPQ6XZF7 1577 aa28.37■■■□□ 2.13
SNHG28-202ENST00000491974 WRNQ14191 1432 aaPredicted RBP eCLIP28.36■■■□□ 2.13
SNHG28-202ENST00000491974 CUX1P39880 1505 aa28.33■■■□□ 2.13
SNHG28-202ENST00000491974 POLA1P09884 1462 aaPredicted RBP28.19■■■□□ 2.1
SNHG28-202ENST00000491974 FGD5Q6ZNL6 1462 aa28.18■■■□□ 2.1
SNHG28-202ENST00000491974 SYNJ1O43426 1573 aa28.18■■■□□ 2.1
SNHG28-202ENST00000491974 TOP2BQ02880 1626 aa28.18■■■□□ 2.1
SNHG28-202ENST00000491974 SOGA1O94964 1423 aa28.14■■■□□ 2.1
SNHG28-202ENST00000491974 IFT140Q96RY7 1462 aa28.14■■■□□ 2.09
SNHG28-202ENST00000491974 BIVM-ERCC5R4GMW8 1640 aa28.12■■■□□ 2.09
SNHG28-202ENST00000491974 TRIM41Q8WV44 630 aa28.09■■■□□ 2.09
SNHG28-202ENST00000491974 RAD54L2Q9Y4B4 1467 aa28.08■■■□□ 2.09
SNHG28-202ENST00000491974 CHIC1Q5VXU3 224 aa28.03■■■□□ 2.08
SNHG28-202ENST00000491974 TARBP1Q13395 1621 aaKnown RBP27.99■■■□□ 2.07
SNHG28-202ENST00000491974 ZNF608Q9ULD9 1512 aaPredicted RBP27.95■■■□□ 2.06
SNHG28-202ENST00000491974 TDRD9Q8NDG6 1382 aaKnown RBP27.94■■■□□ 2.06
SNHG28-202ENST00000491974 ABCA10Q8WWZ4 1543 aa27.93■■■□□ 2.06
SNHG28-202ENST00000491974 AQRO60306 1485 aaKnown RBP eCLIP27.89■■■□□ 2.05
SNHG28-202ENST00000491974 WDR97A6NE52 1622 aa27.79■■■□□ 2.04
SNHG28-202ENST00000491974 GAPVD1Q14C86 1478 aa27.79■■■□□ 2.04
SNHG28-202ENST00000491974 EIF4G3O43432 1585 aaKnown RBP27.77■■■□□ 2.04
SNHG28-202ENST00000491974 KIF27Q86VH2 1401 aa27.76■■■□□ 2.04
SNHG28-202ENST00000491974 GRIN2BQ13224 1484 aa27.73■■■□□ 2.03
SNHG28-202ENST00000491974 ABCA5Q8WWZ7 1642 aa27.7■■■□□ 2.03
SNHG28-202ENST00000491974 IGF1RP08069 1367 aa27.62■■■□□ 2.01
SNHG28-202ENST00000491974 RUSC2Q8N2Y8 1516 aa27.61■■■□□ 2.01
SNHG28-202ENST00000491974 SNAPC4Q5SXM2 1469 aa27.6■■■□□ 2.01
SNHG28-202ENST00000491974 ERICH3Q5RHP9 1530 aa27.59■■■□□ 2.01
SNHG28-202ENST00000491974 MAGI1Q96QZ7 1491 aaPredicted RBP27.58■■■□□ 2.01
SNHG28-202ENST00000491974 FBLN2P98095 1184 aa27.54■■■□□ 2
SNHG28-202ENST00000491974 CHMP7Q8WUX9 453 aaPredicted RBP27.53■■■□□ 2
SNHG28-202ENST00000491974 PBRM1Q86U86 1689 aa27.52■■■□□ 2
SNHG28-202ENST00000491974 EEA1Q15075 1411 aa27.52■■■□□ 2
SNHG28-202ENST00000491974 FHAD1B1AJZ9 1412 aa27.5■■□□□ 1.99
SNHG28-202ENST00000491974 FAM9AQ8IZU1 332 aaPredicted RBP27.49■■□□□ 1.99
SNHG28-202ENST00000491974 CSRNP3Q8WYN3 585 aa27.49■■□□□ 1.99
SNHG28-202ENST00000491974 SYNJ2O15056 1496 aa27.48■■□□□ 1.99
SNHG28-202ENST00000491974 CARMIL1Q5VZK9 1371 aa27.47■■□□□ 1.99
SNHG28-202ENST00000491974 OSCARQ8IYS5 282 aa27.42■■□□□ 1.98
SNHG28-202ENST00000491974 ADAMTS12P58397 1594 aa27.42■■□□□ 1.98
SNHG28-202ENST00000491974 CUL7Q14999 1698 aa27.36■■□□□ 1.97
SNHG28-202ENST00000491974 GRIN2AQ12879 1464 aa27.35■■□□□ 1.97
SNHG28-202ENST00000491974 PRXQ9BXM0 1461 aa27.32■■□□□ 1.96
SNHG28-202ENST00000491974 RAPGEF2Q9Y4G8 1499 aa27.31■■□□□ 1.96
SNHG28-202ENST00000491974 CHD1O14646 1710 aa27.27■■□□□ 1.96
SNHG28-202ENST00000491974 NUP160Q12769 1436 aa27.22■■□□□ 1.95
SNHG28-202ENST00000491974 CEP170Q5SW79 1584 aa27.14■■□□□ 1.93
SNHG28-202ENST00000491974 DNAJC5Q9H3Z4 198 aa27.11■■□□□ 1.93
SNHG28-202ENST00000491974 KIF21BO75037 1637 aa27.09■■□□□ 1.93
SNHG28-202ENST00000491974 EHMT2Q96KQ7 1210 aa27.09■■□□□ 1.93
SNHG28-202ENST00000491974 KIAA0586Q9BVV6 1533 aa27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms