RNA–Protein interactions for RNA: ENST00000491944.1

SCN5A-213, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best)

Gene SCN5A, Length 1,382 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-213ENST00000491944 NISCHQ9Y2I1 1504 aa55.46■■■■■ 6.47
SCN5A-213ENST00000491944 CCDC180Q9P1Z9 1646 aa49.11■■■■■ 5.45
SCN5A-213ENST00000491944 ABCC9O60706 1549 aa47.59■■■■■ 5.21
SCN5A-213ENST00000491944 ZCCHC6Q5VYS8 1495 aaKnown RBP46.31■■■■■ 5
SCN5A-213ENST00000491944 DCAF8L2P0C7V8 631 aa46.22■■■■■ 4.99
SCN5A-213ENST00000491944 NACADO15069 1562 aa46.02■■■■■ 4.96
SCN5A-213ENST00000491944 RB1CC1Q8TDY2 1594 aa45.98■■■■■ 4.95
SCN5A-213ENST00000491944 DCAF1Q9Y4B6 1507 aa45.87■■■■■ 4.93
SCN5A-213ENST00000491944 MYO15BQ96JP2 1530 aa45.86■■■■■ 4.93
SCN5A-213ENST00000491944 UNC13AQ9UPW8 1703 aa44.99■■■■■ 4.79
SCN5A-213ENST00000491944 SCRIBQ14160 1630 aa44.91■■■■■ 4.78
SCN5A-213ENST00000491944 PABPN1Q86U42 306 aaKnown RBP eCLIP44.55■■■■■ 4.72
SCN5A-213ENST00000491944 BICRAQ9NZM4 1560 aa44.54■■■■■ 4.72
SCN5A-213ENST00000491944 SHROOM4Q9ULL8 1493 aa44.22■■■■■ 4.67
SCN5A-213ENST00000491944 EIF4G1Q04637 1599 aaKnown RBP43.34■■■■■ 4.53
SCN5A-213ENST00000491944 CECR2Q9BXF3 1484 aa43.16■■■■■ 4.5
SCN5A-213ENST00000491944 DNAJC5BQ9UF47 199 aa43.15■■■■■ 4.5
SCN5A-213ENST00000491944 CC2D2AQ9P2K1 1620 aa43.06■■■■■ 4.48
SCN5A-213ENST00000491944 BAZ1AQ9NRL2 1556 aaPredicted RBP42.97■■■■■ 4.47
SCN5A-213ENST00000491944 SMARCA4P51532 1647 aa42.96■■■■■ 4.47
SCN5A-213ENST00000491944 MROH2BQ7Z745 1585 aa42.77■■■■■ 4.44
SCN5A-213ENST00000491944 ATAD2BQ9ULI0 1458 aa42.56■■■■■ 4.4
SCN5A-213ENST00000491944 SMARCA2P51531 1590 aa42.55■■■■■ 4.4
SCN5A-213ENST00000491944 PEG3Q9GZU2 1588 aa42.47■■■■■ 4.39
SCN5A-213ENST00000491944 RSF1Q96T23 1441 aaPredicted RBP42.45■■■■■ 4.39
SCN5A-213ENST00000491944 NCAPD3P42695 1498 aa42.43■■■■■ 4.38
SCN5A-213ENST00000491944 WIZO95785 1651 aa42.38■■■■■ 4.37
SCN5A-213ENST00000491944 HMGXB3Q12766 1538 aa42.31■■■■■ 4.36
SCN5A-213ENST00000491944 BAZ1BQ9UIG0 1483 aaKnown RBP42.28■■■■■ 4.36
SCN5A-213ENST00000491944 TOP2AP11388 1531 aaKnown RBP41.93■■■■■ 4.3
SCN5A-213ENST00000491944 SUPT5HO00267 1087 aaKnown RBP41.84■■■■■ 4.29
SCN5A-213ENST00000491944 CCDC88BA6NC98 1476 aa41.42■■■■■ 4.22
SCN5A-213ENST00000491944 NESP48681 1621 aa41.33■■■■■ 4.21
SCN5A-213ENST00000491944 LAMC3Q9Y6N6 1575 aa41.27■■■■■ 4.2
SCN5A-213ENST00000491944 CADPSQ9ULU8 1353 aa41.24■■■■■ 4.19
SCN5A-213ENST00000491944 CFTRP13569 1480 aa41.1■■■■■ 4.17
SCN5A-213ENST00000491944 ERCC6Q03468 1493 aa41■■■■■ 4.15
SCN5A-213ENST00000491944 PDS5BQ9NTI5 1447 aa40.97■■■■■ 4.15
SCN5A-213ENST00000491944 PRDM2Q13029 1718 aa40.92■■■■■ 4.14
SCN5A-213ENST00000491944 KIF21AQ7Z4S6 1674 aa40.89■■■■■ 4.14
SCN5A-213ENST00000491944 FANCD2Q9BXW9 1451 aa40.81■■■■■ 4.12
SCN5A-213ENST00000491944 CEP164Q9UPV0 1460 aa40.72■■■■■ 4.11
SCN5A-213ENST00000491944 THOC2Q8NI27 1593 aaKnown RBP40.58■■■■■ 4.09
SCN5A-213ENST00000491944 MRC2Q9UBG0 1479 aa40.53■■■■■ 4.08
SCN5A-213ENST00000491944 WDR62O43379 1518 aa40.38■■■■■ 4.05
SCN5A-213ENST00000491944 URB2Q14146 1524 aaKnown RBP40.36■■■■■ 4.05
SCN5A-213ENST00000491944 CUX2O14529 1486 aa40.31■■■■■ 4.04
SCN5A-213ENST00000491944 TOPBP1Q92547 1522 aa40.21■■■■■ 4.03
SCN5A-213ENST00000491944 DNMBPQ6XZF7 1577 aa40.21■■■■■ 4.03
SCN5A-213ENST00000491944 ABCC8Q09428 1581 aa40.2■■■■■ 4.03
SCN5A-213ENST00000491944 CUX1P39880 1505 aa40.1■■■■■ 4.01
SCN5A-213ENST00000491944 WRNQ14191 1432 aaPredicted RBP eCLIP40.03■■■■■ 4
SCN5A-213ENST00000491944 SYNJ1O43426 1573 aa39.93■■■■□ 3.98
SCN5A-213ENST00000491944 POLA1P09884 1462 aaPredicted RBP39.89■■■■□ 3.98
SCN5A-213ENST00000491944 FGD5Q6ZNL6 1462 aa39.89■■■■□ 3.98
SCN5A-213ENST00000491944 TOP2BQ02880 1626 aa39.89■■■■□ 3.98
SCN5A-213ENST00000491944 BIVM-ERCC5R4GMW8 1640 aa39.89■■■■□ 3.98
SCN5A-213ENST00000491944 IFT140Q96RY7 1462 aa39.81■■■■□ 3.96
SCN5A-213ENST00000491944 SOGA1O94964 1423 aa39.74■■■■□ 3.95
SCN5A-213ENST00000491944 RAD54L2Q9Y4B4 1467 aa39.73■■■■□ 3.95
SCN5A-213ENST00000491944 TARBP1Q13395 1621 aaKnown RBP39.72■■■■□ 3.95
SCN5A-213ENST00000491944 ZNF608Q9ULD9 1512 aaPredicted RBP39.61■■■■□ 3.93
SCN5A-213ENST00000491944 WDR97A6NE52 1622 aa39.55■■■■□ 3.92
SCN5A-213ENST00000491944 ABCA10Q8WWZ4 1543 aa39.51■■■■□ 3.92
SCN5A-213ENST00000491944 EIF4G3O43432 1585 aaKnown RBP39.51■■■■□ 3.91
SCN5A-213ENST00000491944 TDRD9Q8NDG6 1382 aaKnown RBP39.47■■■■□ 3.91
SCN5A-213ENST00000491944 TRIM41Q8WV44 630 aa39.46■■■■□ 3.91
SCN5A-213ENST00000491944 AQRO60306 1485 aaKnown RBP eCLIP39.45■■■■□ 3.91
SCN5A-213ENST00000491944 ABCA5Q8WWZ7 1642 aa39.32■■■■□ 3.89
SCN5A-213ENST00000491944 GAPVD1Q14C86 1478 aa39.3■■■■□ 3.88
SCN5A-213ENST00000491944 CHIC1Q5VXU3 224 aa39.3■■■■□ 3.88
SCN5A-213ENST00000491944 PBRM1Q86U86 1689 aa39.24■■■■□ 3.87
SCN5A-213ENST00000491944 GRIN2BQ13224 1484 aa39.22■■■■□ 3.87
SCN5A-213ENST00000491944 KIF27Q86VH2 1401 aa39.16■■■■□ 3.86
SCN5A-213ENST00000491944 SNAPC4Q5SXM2 1469 aa39.12■■■■□ 3.85
SCN5A-213ENST00000491944 MAGI1Q96QZ7 1491 aaPredicted RBP39.06■■■■□ 3.84
SCN5A-213ENST00000491944 ERICH3Q5RHP9 1530 aa39.05■■■■□ 3.84
SCN5A-213ENST00000491944 RUSC2Q8N2Y8 1516 aa38.96■■■■□ 3.83
SCN5A-213ENST00000491944 CHD1O14646 1710 aa38.94■■■■□ 3.82
SCN5A-213ENST00000491944 FBLN2P98095 1184 aa38.93■■■■□ 3.82
SCN5A-213ENST00000491944 ADAMTS12P58397 1594 aa38.92■■■■□ 3.82
SCN5A-213ENST00000491944 IGF1RP08069 1367 aa38.9■■■■□ 3.82
SCN5A-213ENST00000491944 SYNJ2O15056 1496 aa38.9■■■■□ 3.82
SCN5A-213ENST00000491944 CHMP7Q8WUX9 453 aaPredicted RBP38.86■■■■□ 3.81
SCN5A-213ENST00000491944 FHAD1B1AJZ9 1412 aa38.84■■■■□ 3.81
SCN5A-213ENST00000491944 CUL7Q14999 1698 aa38.83■■■■□ 3.81
SCN5A-213ENST00000491944 OSCARQ8IYS5 282 aa38.74■■■■□ 3.79
SCN5A-213ENST00000491944 EEA1Q15075 1411 aa38.73■■■■□ 3.79
SCN5A-213ENST00000491944 GRIN2AQ12879 1464 aa38.72■■■■□ 3.79
SCN5A-213ENST00000491944 CARMIL1Q5VZK9 1371 aa38.71■■■■□ 3.79
SCN5A-213ENST00000491944 FAM9AQ8IZU1 332 aaPredicted RBP38.69■■■■□ 3.78
SCN5A-213ENST00000491944 CSRNP3Q8WYN3 585 aa38.61■■■■□ 3.77
SCN5A-213ENST00000491944 RAPGEF2Q9Y4G8 1499 aa38.55■■■■□ 3.76
SCN5A-213ENST00000491944 CEP170Q5SW79 1584 aa38.52■■■■□ 3.76
SCN5A-213ENST00000491944 PRXQ9BXM0 1461 aa38.51■■■■□ 3.75
SCN5A-213ENST00000491944 NUP160Q12769 1436 aa38.5■■■■□ 3.75
SCN5A-213ENST00000491944 CLASP1Q7Z460 1538 aa38.45■■■■□ 3.75
SCN5A-213ENST00000491944 DNAJC5Q9H3Z4 198 aa38.44■■■■□ 3.74
SCN5A-213ENST00000491944 KIF21BO75037 1637 aa38.32■■■■□ 3.72
SCN5A-213ENST00000491944 KIAA0586Q9BVV6 1533 aa38.27■■■■□ 3.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms