RNA–Protein interactions for RNA: ENST00000491544.1

PCYT1A-216, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 3

Gene PCYT1A, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-216ENST00000491544 NISCHQ9Y2I1 1504 aa25.74■■□□□ 1.71
PCYT1A-216ENST00000491544 ABCC9O60706 1549 aa25.2■■□□□ 1.62
PCYT1A-216ENST00000491544 DNAJC5BQ9UF47 199 aa24.97■■□□□ 1.59
PCYT1A-216ENST00000491544 DNAJC5Q9H3Z4 198 aa23.97■■□□□ 1.43
PCYT1A-216ENST00000491544 CCDC180Q9P1Z9 1646 aa23.7■■□□□ 1.39
PCYT1A-216ENST00000491544 RB1CC1Q8TDY2 1594 aa23.29■■□□□ 1.32
PCYT1A-216ENST00000491544 PABPN1Q86U42 306 aaKnown RBP eCLIP23.21■■□□□ 1.31
PCYT1A-216ENST00000491544 CECR2Q9BXF3 1484 aa22.85■■□□□ 1.25
PCYT1A-216ENST00000491544 NACADO15069 1562 aa22.77■■□□□ 1.24
PCYT1A-216ENST00000491544 BICRAQ9NZM4 1560 aa22.72■■□□□ 1.23
PCYT1A-216ENST00000491544 UNC13AQ9UPW8 1703 aa22.71■■□□□ 1.23
PCYT1A-216ENST00000491544 CC2D2AQ9P2K1 1620 aa22.66■■□□□ 1.22
PCYT1A-216ENST00000491544 CUX2O14529 1486 aa22.31■■□□□ 1.16
PCYT1A-216ENST00000491544 TRIM41Q8WV44 630 aa22.3■■□□□ 1.16
PCYT1A-216ENST00000491544 DCAF8L2P0C7V8 631 aa22.29■■□□□ 1.16
PCYT1A-216ENST00000491544 EIF4G1Q04637 1599 aaKnown RBP22.27■■□□□ 1.16
PCYT1A-216ENST00000491544 SHROOM4Q9ULL8 1493 aa22.25■■□□□ 1.15
PCYT1A-216ENST00000491544 MYO15BQ96JP2 1530 aa21.99■■□□□ 1.11
PCYT1A-216ENST00000491544 ERCC6Q03468 1493 aa21.84■■□□□ 1.09
PCYT1A-216ENST00000491544 SCRIBQ14160 1630 aa21.57■■□□□ 1.04
PCYT1A-216ENST00000491544 AEBP2Q6ZN18 517 aaPredicted RBP21.32■■□□□ 1
PCYT1A-216ENST00000491544 THOC2Q8NI27 1593 aaKnown RBP21.31■■□□□ 1
PCYT1A-216ENST00000491544 NESP48681 1621 aa21.23■□□□□ 0.99
PCYT1A-216ENST00000491544 DCAF1Q9Y4B6 1507 aa21.17■□□□□ 0.98
PCYT1A-216ENST00000491544 NCAPD3P42695 1498 aa21.07■□□□□ 0.96
PCYT1A-216ENST00000491544 ZCCHC6Q5VYS8 1495 aaKnown RBP21.04■□□□□ 0.96
PCYT1A-216ENST00000491544 SMARCA2P51531 1590 aa21.04■□□□□ 0.96
PCYT1A-216ENST00000491544 BAZ1AQ9NRL2 1556 aaPredicted RBP21.03■□□□□ 0.96
PCYT1A-216ENST00000491544 OSCARQ8IYS5 282 aa20.99■□□□□ 0.95
PCYT1A-216ENST00000491544 RIMBP3CA6NJZ7 1639 aa20.93■□□□□ 0.94
PCYT1A-216ENST00000491544 RIMBP3BA6NNM3 1639 aa20.93■□□□□ 0.94
PCYT1A-216ENST00000491544 RIMBP3Q9UFD9 1639 aa20.93■□□□□ 0.94
PCYT1A-216ENST00000491544 TRHP20396 242 aaPredicted RBP20.85■□□□□ 0.93
PCYT1A-216ENST00000491544 KIF21AQ7Z4S6 1674 aa20.85■□□□□ 0.93
PCYT1A-216ENST00000491544 ATAD2BQ9ULI0 1458 aa20.81■□□□□ 0.92
PCYT1A-216ENST00000491544 LAMC3Q9Y6N6 1575 aa20.8■□□□□ 0.92
PCYT1A-216ENST00000491544 ILDR1Q86SU0 546 aaPredicted RBP20.78■□□□□ 0.92
PCYT1A-216ENST00000491544 HMGXB3Q12766 1538 aa20.78■□□□□ 0.92
PCYT1A-216ENST00000491544 ARHGEF11O15085 1522 aa20.73■□□□□ 0.91
PCYT1A-216ENST00000491544 PDS5BQ9NTI5 1447 aa20.73■□□□□ 0.91
PCYT1A-216ENST00000491544 WDR62O43379 1518 aa20.68■□□□□ 0.9
PCYT1A-216ENST00000491544 MRC2Q9UBG0 1479 aa20.68■□□□□ 0.9
PCYT1A-216ENST00000491544 CYB5RLQ6IPT4 315 aa20.62■□□□□ 0.89
PCYT1A-216ENST00000491544 BAZ1BQ9UIG0 1483 aaKnown RBP20.51■□□□□ 0.87
PCYT1A-216ENST00000491544 ARAP1Q96P48 1450 aa20.45■□□□□ 0.86
PCYT1A-216ENST00000491544 SMARCA4P51532 1647 aa20.38■□□□□ 0.85
PCYT1A-216ENST00000491544 CADPSQ9ULU8 1353 aa20.34■□□□□ 0.85
PCYT1A-216ENST00000491544 CEP164Q9UPV0 1460 aa20.28■□□□□ 0.84
PCYT1A-216ENST00000491544 PEG3Q9GZU2 1588 aa20.21■□□□□ 0.83
PCYT1A-216ENST00000491544 FANCD2Q9BXW9 1451 aa20.14■□□□□ 0.81
PCYT1A-216ENST00000491544 RSF1Q96T23 1441 aaPredicted RBP20.13■□□□□ 0.81
PCYT1A-216ENST00000491544 URB2Q14146 1524 aaKnown RBP20.09■□□□□ 0.81
PCYT1A-216ENST00000491544 ZNF608Q9ULD9 1512 aaPredicted RBP20.09■□□□□ 0.81
PCYT1A-216ENST00000491544 CHD1O14646 1710 aa19.96■□□□□ 0.79
PCYT1A-216ENST00000491544 IFT140Q96RY7 1462 aa19.94■□□□□ 0.78
PCYT1A-216ENST00000491544 EIF4G3O43432 1585 aaKnown RBP19.88■□□□□ 0.77
PCYT1A-216ENST00000491544 KDM4FA0A1W2PPD8 638 aa19.88■□□□□ 0.77
PCYT1A-216ENST00000491544 MROH2BQ7Z745 1585 aa19.83■□□□□ 0.77
PCYT1A-216ENST00000491544 CFTRP13569 1480 aa19.82■□□□□ 0.76
PCYT1A-216ENST00000491544 FBLN2P98095 1184 aa19.81■□□□□ 0.76
PCYT1A-216ENST00000491544 CLASP1Q7Z460 1538 aa19.76■□□□□ 0.75
PCYT1A-216ENST00000491544 AQRO60306 1485 aaKnown RBP eCLIP19.69■□□□□ 0.741e-6■□□□□ 9.4
PCYT1A-216ENST00000491544 ERCC6L2Q5T890 1561 aa19.69■□□□□ 0.74
PCYT1A-216ENST00000491544 FBXO41Q8TF61 875 aa19.68■□□□□ 0.74
PCYT1A-216ENST00000491544 GAPVD1Q14C86 1478 aa19.66■□□□□ 0.74
PCYT1A-216ENST00000491544 LMTK3Q96Q04 1460 aa19.65■□□□□ 0.74
PCYT1A-216ENST00000491544 HECW2Q9P2P5 1572 aa19.59■□□□□ 0.73
PCYT1A-216ENST00000491544 TOPBP1Q92547 1522 aa19.59■□□□□ 0.73
PCYT1A-216ENST00000491544 SYNJ1O43426 1573 aa19.57■□□□□ 0.72
PCYT1A-216ENST00000491544 KIF13AQ9H1H9 1805 aa19.55■□□□□ 0.72
PCYT1A-216ENST00000491544 SOCS7O14512 581 aa19.53■□□□□ 0.72
PCYT1A-216ENST00000491544 TARBP1Q13395 1621 aaKnown RBP19.52■□□□□ 0.72
PCYT1A-216ENST00000491544 WIZO95785 1651 aa19.48■□□□□ 0.71
PCYT1A-216ENST00000491544 SNAPC4Q5SXM2 1469 aa19.46■□□□□ 0.71
PCYT1A-216ENST00000491544 CHMP7Q8WUX9 453 aaPredicted RBP19.42■□□□□ 0.7
PCYT1A-216ENST00000491544 ILDR2Q71H61 639 aa19.41■□□□□ 0.7
PCYT1A-216ENST00000491544 KDM6BO15054 1643 aa19.4■□□□□ 0.7
PCYT1A-216ENST00000491544 PRDM2Q13029 1718 aa19.39■□□□□ 0.7
PCYT1A-216ENST00000491544 ABCC8Q09428 1581 aa19.39■□□□□ 0.69
PCYT1A-216ENST00000491544 ADGRL1O94910 1474 aa19.38■□□□□ 0.69
PCYT1A-216ENST00000491544 DNMBPQ6XZF7 1577 aa19.37■□□□□ 0.69
PCYT1A-216ENST00000491544 SYNJ2O15056 1496 aa19.35■□□□□ 0.69
PCYT1A-216ENST00000491544 TDRD9Q8NDG6 1382 aaKnown RBP19.33■□□□□ 0.69
PCYT1A-216ENST00000491544 MAGI1Q96QZ7 1491 aaPredicted RBP19.32■□□□□ 0.68
PCYT1A-216ENST00000491544 POLA1P09884 1462 aaPredicted RBP19.3■□□□□ 0.68
PCYT1A-216ENST00000491544 FAM69CQ0P6D2 419 aa19.3■□□□□ 0.68
PCYT1A-216ENST00000491544 ABCC10Q5T3U5 1492 aa19.28■□□□□ 0.68
PCYT1A-216ENST00000491544 RAD54L2Q9Y4B4 1467 aa19.26■□□□□ 0.67
PCYT1A-216ENST00000491544 DISP3Q9P2K9 1392 aa19.21■□□□□ 0.67
PCYT1A-216ENST00000491544 DIP2BQ9P265 1576 aa19.2■□□□□ 0.66
PCYT1A-216ENST00000491544 WDR97A6NE52 1622 aa19.19■□□□□ 0.66
PCYT1A-216ENST00000491544 GRIN2BQ13224 1484 aa19.17■□□□□ 0.66
PCYT1A-216ENST00000491544 TOP2AP11388 1531 aaKnown RBP19.16■□□□□ 0.66
PCYT1A-216ENST00000491544 SOGA1O94964 1423 aa19.15■□□□□ 0.66
PCYT1A-216ENST00000491544 CEP170Q5SW79 1584 aa19.15■□□□□ 0.66
PCYT1A-216ENST00000491544 MAPKBP1O60336 1514 aa19.1■□□□□ 0.65
PCYT1A-216ENST00000491544 TSPOAP1O95153 1857 aa19.03■□□□□ 0.64
PCYT1A-216ENST00000491544 SHROOM2Q13796 1616 aa19■□□□□ 0.63
PCYT1A-216ENST00000491544 FGD5Q6ZNL6 1462 aa18.97■□□□□ 0.63
PCYT1A-216ENST00000491544 CCDC88BA6NC98 1476 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms