RNA–Protein interactions for RNA: ENST00000491450.1

GM2AP1-201, Transcript of GM2 ganglioside activator pseudogene 1, humanhuman

BASIC

Gene GM2AP1, Length 521 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GM2AP1-201ENST00000491450 NISCHQ9Y2I1 1504 aa28.93■■■□□ 2.22
GM2AP1-201ENST00000491450 CCDC180Q9P1Z9 1646 aa25.62■■□□□ 1.69
GM2AP1-201ENST00000491450 ABCC9O60706 1549 aa24.84■■□□□ 1.57
GM2AP1-201ENST00000491450 ZCCHC6Q5VYS8 1495 aaKnown RBP24.16■■□□□ 1.46
GM2AP1-201ENST00000491450 DCAF8L2P0C7V8 631 aa24.04■■□□□ 1.44
GM2AP1-201ENST00000491450 NACADO15069 1562 aa24.01■■□□□ 1.43
GM2AP1-201ENST00000491450 RB1CC1Q8TDY2 1594 aa23.98■■□□□ 1.43
GM2AP1-201ENST00000491450 MYO15BQ96JP2 1530 aa23.94■■□□□ 1.42
GM2AP1-201ENST00000491450 DCAF1Q9Y4B6 1507 aa23.93■■□□□ 1.42
GM2AP1-201ENST00000491450 UNC13AQ9UPW8 1703 aa23.5■■□□□ 1.35
GM2AP1-201ENST00000491450 SCRIBQ14160 1630 aa23.42■■□□□ 1.34
GM2AP1-201ENST00000491450 BICRAQ9NZM4 1560 aa23.27■■□□□ 1.32
GM2AP1-201ENST00000491450 PABPN1Q86U42 306 aaKnown RBP eCLIP23.24■■□□□ 1.31
GM2AP1-201ENST00000491450 SHROOM4Q9ULL8 1493 aa23.02■■□□□ 1.28
GM2AP1-201ENST00000491450 EIF4G1Q04637 1599 aaKnown RBP22.63■■□□□ 1.21
GM2AP1-201ENST00000491450 DNAJC5BQ9UF47 199 aa22.56■■□□□ 1.2
GM2AP1-201ENST00000491450 CECR2Q9BXF3 1484 aa22.53■■□□□ 1.2
GM2AP1-201ENST00000491450 CC2D2AQ9P2K1 1620 aa22.48■■□□□ 1.19
GM2AP1-201ENST00000491450 SMARCA4P51532 1647 aa22.42■■□□□ 1.18
GM2AP1-201ENST00000491450 BAZ1AQ9NRL2 1556 aaPredicted RBP22.4■■□□□ 1.18
GM2AP1-201ENST00000491450 MROH2BQ7Z745 1585 aa22.32■■□□□ 1.16
GM2AP1-201ENST00000491450 ATAD2BQ9ULI0 1458 aa22.21■■□□□ 1.15
GM2AP1-201ENST00000491450 SMARCA2P51531 1590 aa22.19■■□□□ 1.14
GM2AP1-201ENST00000491450 PEG3Q9GZU2 1588 aa22.17■■□□□ 1.14
GM2AP1-201ENST00000491450 NCAPD3P42695 1498 aa22.14■■□□□ 1.13
GM2AP1-201ENST00000491450 RSF1Q96T23 1441 aaPredicted RBP22.14■■□□□ 1.13
GM2AP1-201ENST00000491450 WIZO95785 1651 aa22.1■■□□□ 1.13
GM2AP1-201ENST00000491450 HMGXB3Q12766 1538 aa22.07■■□□□ 1.12
GM2AP1-201ENST00000491450 BAZ1BQ9UIG0 1483 aaKnown RBP22.04■■□□□ 1.12
GM2AP1-201ENST00000491450 TOP2AP11388 1531 aaKnown RBP21.86■■□□□ 1.09
GM2AP1-201ENST00000491450 SUPT5HO00267 1087 aaKnown RBP21.75■■□□□ 1.07
GM2AP1-201ENST00000491450 CCDC88BA6NC98 1476 aa21.59■■□□□ 1.05
GM2AP1-201ENST00000491450 NESP48681 1621 aa21.58■■□□□ 1.04
GM2AP1-201ENST00000491450 LAMC3Q9Y6N6 1575 aa21.53■■□□□ 1.04
GM2AP1-201ENST00000491450 CADPSQ9ULU8 1353 aa21.5■■□□□ 1.03
GM2AP1-201ENST00000491450 CFTRP13569 1480 aa21.45■■□□□ 1.02
GM2AP1-201ENST00000491450 ERCC6Q03468 1493 aa21.38■■□□□ 1.01
GM2AP1-201ENST00000491450 PDS5BQ9NTI5 1447 aa21.36■■□□□ 1.01
GM2AP1-201ENST00000491450 PRDM2Q13029 1718 aa21.35■■□□□ 1.01
GM2AP1-201ENST00000491450 KIF21AQ7Z4S6 1674 aa21.34■■□□□ 1.01
GM2AP1-201ENST00000491450 FANCD2Q9BXW9 1451 aa21.28■■□□□ 1
GM2AP1-201ENST00000491450 CEP164Q9UPV0 1460 aa21.23■□□□□ 0.99
GM2AP1-201ENST00000491450 THOC2Q8NI27 1593 aaKnown RBP21.2■□□□□ 0.98
GM2AP1-201ENST00000491450 MRC2Q9UBG0 1479 aa21.15■□□□□ 0.98
GM2AP1-201ENST00000491450 WDR62O43379 1518 aa21.09■□□□□ 0.97
GM2AP1-201ENST00000491450 URB2Q14146 1524 aaKnown RBP21.07■□□□□ 0.96
GM2AP1-201ENST00000491450 CUX2O14529 1486 aa21.05■□□□□ 0.96
GM2AP1-201ENST00000491450 TOPBP1Q92547 1522 aa20.98■□□□□ 0.95
GM2AP1-201ENST00000491450 DNMBPQ6XZF7 1577 aa20.97■□□□□ 0.95
GM2AP1-201ENST00000491450 ABCC8Q09428 1581 aa20.95■□□□□ 0.94
GM2AP1-201ENST00000491450 CUX1P39880 1505 aa20.93■□□□□ 0.94
GM2AP1-201ENST00000491450 WRNQ14191 1432 aaPredicted RBP eCLIP20.86■□□□□ 0.93
GM2AP1-201ENST00000491450 SYNJ1O43426 1573 aa20.83■□□□□ 0.92
GM2AP1-201ENST00000491450 POLA1P09884 1462 aaPredicted RBP20.82■□□□□ 0.92
GM2AP1-201ENST00000491450 FGD5Q6ZNL6 1462 aa20.81■□□□□ 0.92
GM2AP1-201ENST00000491450 TOP2BQ02880 1626 aa20.8■□□□□ 0.92
GM2AP1-201ENST00000491450 BIVM-ERCC5R4GMW8 1640 aa20.8■□□□□ 0.92
GM2AP1-201ENST00000491450 IFT140Q96RY7 1462 aa20.76■□□□□ 0.91
GM2AP1-201ENST00000491450 TARBP1Q13395 1621 aaKnown RBP20.74■□□□□ 0.91
GM2AP1-201ENST00000491450 RAD54L2Q9Y4B4 1467 aa20.73■□□□□ 0.91
GM2AP1-201ENST00000491450 SOGA1O94964 1423 aa20.71■□□□□ 0.91
GM2AP1-201ENST00000491450 ZNF608Q9ULD9 1512 aaPredicted RBP20.68■□□□□ 0.9
GM2AP1-201ENST00000491450 WDR97A6NE52 1622 aa20.65■□□□□ 0.9
GM2AP1-201ENST00000491450 EIF4G3O43432 1585 aaKnown RBP20.63■□□□□ 0.89
GM2AP1-201ENST00000491450 ABCA10Q8WWZ4 1543 aa20.6■□□□□ 0.89
GM2AP1-201ENST00000491450 AQRO60306 1485 aaKnown RBP eCLIP20.58■□□□□ 0.89
GM2AP1-201ENST00000491450 TDRD9Q8NDG6 1382 aaKnown RBP20.58■□□□□ 0.88
GM2AP1-201ENST00000491450 ABCA5Q8WWZ7 1642 aa20.53■□□□□ 0.88
GM2AP1-201ENST00000491450 TRIM41Q8WV44 630 aa20.51■□□□□ 0.87
GM2AP1-201ENST00000491450 GAPVD1Q14C86 1478 aa20.49■□□□□ 0.87
GM2AP1-201ENST00000491450 PBRM1Q86U86 1689 aa20.47■□□□□ 0.87
GM2AP1-201ENST00000491450 GRIN2BQ13224 1484 aa20.45■□□□□ 0.86
GM2AP1-201ENST00000491450 CHIC1Q5VXU3 224 aa20.43■□□□□ 0.86
GM2AP1-201ENST00000491450 SNAPC4Q5SXM2 1469 aa20.41■□□□□ 0.86
GM2AP1-201ENST00000491450 KIF27Q86VH2 1401 aa20.39■□□□□ 0.85
GM2AP1-201ENST00000491450 MAGI1Q96QZ7 1491 aaPredicted RBP20.37■□□□□ 0.85
GM2AP1-201ENST00000491450 ERICH3Q5RHP9 1530 aa20.36■□□□□ 0.85
GM2AP1-201ENST00000491450 CHD1O14646 1710 aa20.32■□□□□ 0.84
GM2AP1-201ENST00000491450 RUSC2Q8N2Y8 1516 aa20.32■□□□□ 0.84
GM2AP1-201ENST00000491450 ADAMTS12P58397 1594 aa20.31■□□□□ 0.84
GM2AP1-201ENST00000491450 SYNJ2O15056 1496 aa20.29■□□□□ 0.84
GM2AP1-201ENST00000491450 IGF1RP08069 1367 aa20.27■□□□□ 0.84
GM2AP1-201ENST00000491450 FBLN2P98095 1184 aa20.26■□□□□ 0.83
GM2AP1-201ENST00000491450 FHAD1B1AJZ9 1412 aa20.26■□□□□ 0.83
GM2AP1-201ENST00000491450 CUL7Q14999 1698 aa20.24■□□□□ 0.83
GM2AP1-201ENST00000491450 CHMP7Q8WUX9 453 aaPredicted RBP20.24■□□□□ 0.83
GM2AP1-201ENST00000491450 GRIN2AQ12879 1464 aa20.2■□□□□ 0.82
GM2AP1-201ENST00000491450 OSCARQ8IYS5 282 aa20.19■□□□□ 0.82
GM2AP1-201ENST00000491450 CARMIL1Q5VZK9 1371 aa20.16■□□□□ 0.82
GM2AP1-201ENST00000491450 EEA1Q15075 1411 aa20.15■□□□□ 0.82
GM2AP1-201ENST00000491450 FAM9AQ8IZU1 332 aaPredicted RBP20.11■□□□□ 0.81
GM2AP1-201ENST00000491450 CEP170Q5SW79 1584 aa20.11■□□□□ 0.81
GM2AP1-201ENST00000491450 NUP160Q12769 1436 aa20.1■□□□□ 0.81
GM2AP1-201ENST00000491450 DNAJC5Q9H3Z4 198 aa20.09■□□□□ 0.81
GM2AP1-201ENST00000491450 CLASP1Q7Z460 1538 aa20.08■□□□□ 0.81
GM2AP1-201ENST00000491450 PRXQ9BXM0 1461 aa20.08■□□□□ 0.81
GM2AP1-201ENST00000491450 CSRNP3Q8WYN3 585 aa20.08■□□□□ 0.81
GM2AP1-201ENST00000491450 RAPGEF2Q9Y4G8 1499 aa20.07■□□□□ 0.8
GM2AP1-201ENST00000491450 KIF21BO75037 1637 aa19.96■□□□□ 0.79
GM2AP1-201ENST00000491450 KIAA0586Q9BVV6 1533 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms