RNA–Protein interactions for RNA: ENST00000491073.5

PDPK1-212, Transcript of 3-phosphoinositide dependent protein kinase 1, humanhuman

TSL 1 (best)

Gene PDPK1, Length 2,387 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPK1-212ENST00000491073 NISCHQ9Y2I1 1504 aa37.48■■■■□ 3.59
PDPK1-212ENST00000491073 CCDC180Q9P1Z9 1646 aa32.21■■■□□ 2.75
PDPK1-212ENST00000491073 ZCCHC6Q5VYS8 1495 aaKnown RBP31.57■■■□□ 2.64
PDPK1-212ENST00000491073 SHROOM4Q9ULL8 1493 aa31.3■■■□□ 2.6
PDPK1-212ENST00000491073 DCAF8L2P0C7V8 631 aa31.05■■■□□ 2.56
PDPK1-212ENST00000491073 DCAF1Q9Y4B6 1507 aa30.78■■■□□ 2.52
PDPK1-212ENST00000491073 ABCC9O60706 1549 aa30.39■■■□□ 2.45
PDPK1-212ENST00000491073 SUPT5HO00267 1087 aaKnown RBP30.3■■■□□ 2.44
PDPK1-212ENST00000491073 MYO15BQ96JP2 1530 aa30.15■■■□□ 2.42
PDPK1-212ENST00000491073 SCRIBQ14160 1630 aa30.02■■■□□ 2.4
PDPK1-212ENST00000491073 NACADO15069 1562 aa29.91■■■□□ 2.38
PDPK1-212ENST00000491073 RB1CC1Q8TDY2 1594 aa29.56■■■□□ 2.32
PDPK1-212ENST00000491073 RSF1Q96T23 1441 aaPredicted RBP29.38■■■□□ 2.29
PDPK1-212ENST00000491073 CECR2Q9BXF3 1484 aa29.31■■■□□ 2.28
PDPK1-212ENST00000491073 UNC13AQ9UPW8 1703 aa29.22■■■□□ 2.27
PDPK1-212ENST00000491073 CHIC1Q5VXU3 224 aa29.22■■■□□ 2.27
PDPK1-212ENST00000491073 MROH2BQ7Z745 1585 aa29.12■■■□□ 2.25
PDPK1-212ENST00000491073 WIZO95785 1651 aa28.92■■■□□ 2.22
PDPK1-212ENST00000491073 BICRAQ9NZM4 1560 aa28.91■■■□□ 2.22
PDPK1-212ENST00000491073 PABPN1Q86U42 306 aaKnown RBP eCLIP28.89■■■□□ 2.22
PDPK1-212ENST00000491073 BAZ1AQ9NRL2 1556 aaPredicted RBP28.79■■■□□ 2.2
PDPK1-212ENST00000491073 SMARCA4P51532 1647 aa28.69■■■□□ 2.18
PDPK1-212ENST00000491073 TOP2AP11388 1531 aaKnown RBP28.43■■■□□ 2.14
PDPK1-212ENST00000491073 LOC105371045A0A1W2PR82 267 aa28.31■■■□□ 2.12
PDPK1-212ENST00000491073 CCDC88BA6NC98 1476 aa28.3■■■□□ 2.12
PDPK1-212ENST00000491073 EIF4G1Q04637 1599 aaKnown RBP28.29■■■□□ 2.12
PDPK1-212ENST00000491073 SMARCA2P51531 1590 aa28.28■■■□□ 2.12
PDPK1-212ENST00000491073 TRIM41Q8WV44 630 aa28.27■■■□□ 2.12
PDPK1-212ENST00000491073 PEG3Q9GZU2 1588 aa28.21■■■□□ 2.11
PDPK1-212ENST00000491073 ATAD2BQ9ULI0 1458 aa28.13■■■□□ 2.09
PDPK1-212ENST00000491073 FAM9AQ8IZU1 332 aaPredicted RBP28.02■■■□□ 2.08
PDPK1-212ENST00000491073 ABCC8Q09428 1581 aa27.98■■■□□ 2.07
PDPK1-212ENST00000491073 BAZ1BQ9UIG0 1483 aaKnown RBP27.94■■■□□ 2.06
PDPK1-212ENST00000491073 EHMT2Q96KQ7 1210 aa27.77■■■□□ 2.04
PDPK1-212ENST00000491073 NCAPD3P42695 1498 aa27.71■■■□□ 2.03
PDPK1-212ENST00000491073 HMGXB3Q12766 1538 aa27.63■■■□□ 2.01
PDPK1-212ENST00000491073 SOGA1O94964 1423 aa27.57■■■□□ 2
PDPK1-212ENST00000491073 WRNQ14191 1432 aaPredicted RBP eCLIP27.54■■■□□ 2
PDPK1-212ENST00000491073 SYNJ1O43426 1573 aa27.53■■■□□ 2
PDPK1-212ENST00000491073 RUSC2Q8N2Y8 1516 aa27.52■■■□□ 2
PDPK1-212ENST00000491073 PCGF6Q9BYE7 350 aa27.45■■□□□ 1.98
PDPK1-212ENST00000491073 CC2D2AQ9P2K1 1620 aa27.4■■□□□ 1.98
PDPK1-212ENST00000491073 CFTRP13569 1480 aa27.28■■□□□ 1.96
PDPK1-212ENST00000491073 CSRNP3Q8WYN3 585 aa27.27■■□□□ 1.96
PDPK1-212ENST00000491073 TOP2BQ02880 1626 aa27.22■■□□□ 1.95
PDPK1-212ENST00000491073 EEA1Q15075 1411 aa27.21■■□□□ 1.95
PDPK1-212ENST00000491073 CUX1P39880 1505 aa27.16■■□□□ 1.94
PDPK1-212ENST00000491073 BIVM-ERCC5R4GMW8 1640 aa27.16■■□□□ 1.94
PDPK1-212ENST00000491073 TRIM26Q12899 539 aaPredicted RBP27.1■■□□□ 1.93
PDPK1-212ENST00000491073 CADPSQ9ULU8 1353 aa27.09■■□□□ 1.93
PDPK1-212ENST00000491073 TNIKQ9UKE5 1360 aa27.06■■□□□ 1.92
PDPK1-212ENST00000491073 CEP162Q5TB80 1403 aa27.04■■□□□ 1.92
PDPK1-212ENST00000491073 PPARGC1BQ86YN6 1023 aaKnown RBP27.03■■□□□ 1.92
PDPK1-212ENST00000491073 PRDM2Q13029 1718 aa27.03■■□□□ 1.92
PDPK1-212ENST00000491073 DNAJC5BQ9UF47 199 aa27.02■■□□□ 1.92
PDPK1-212ENST00000491073 GOLGA3Q08378 1498 aa27.01■■□□□ 1.91
PDPK1-212ENST00000491073 UBTFP17480 764 aaKnown RBP27■■□□□ 1.91
PDPK1-212ENST00000491073 HRCP23327 699 aa26.98■■□□□ 1.91
PDPK1-212ENST00000491073 KIF21BO75037 1637 aa26.96■■□□□ 1.91
PDPK1-212ENST00000491073 CEP164Q9UPV0 1460 aa26.93■■□□□ 1.9
PDPK1-212ENST00000491073 RAPGEF2Q9Y4G8 1499 aa26.92■■□□□ 1.9
PDPK1-212ENST00000491073 NESP48681 1621 aa26.92■■□□□ 1.9
PDPK1-212ENST00000491073 FANCD2Q9BXW9 1451 aa26.81■■□□□ 1.88
PDPK1-212ENST00000491073 PRXQ9BXM0 1461 aa26.77■■□□□ 1.88
PDPK1-212ENST00000491073 FGD5Q6ZNL6 1462 aa26.73■■□□□ 1.87
PDPK1-212ENST00000491073 KIF27Q86VH2 1401 aa26.73■■□□□ 1.87
PDPK1-212ENST00000491073 CLIP1P30622 1438 aa26.68■■□□□ 1.86
PDPK1-212ENST00000491073 TTBK1Q5TCY1 1321 aaPredicted RBP26.67■■□□□ 1.86
PDPK1-212ENST00000491073 CUX2O14529 1486 aa26.66■■□□□ 1.86
PDPK1-212ENST00000491073 RANGAP1P46060 587 aaPredicted RBP26.66■■□□□ 1.86
PDPK1-212ENST00000491073 ERICH3Q5RHP9 1530 aa26.64■■□□□ 1.85
PDPK1-212ENST00000491073 LAMC3Q9Y6N6 1575 aa26.6■■□□□ 1.85
PDPK1-212ENST00000491073 IGF1RP08069 1367 aa26.6■■□□□ 1.85
PDPK1-212ENST00000491073 TOPBP1Q92547 1522 aa26.59■■□□□ 1.85
PDPK1-212ENST00000491073 DNMBPQ6XZF7 1577 aa26.58■■□□□ 1.85
PDPK1-212ENST00000491073 RAD54L2Q9Y4B4 1467 aa26.58■■□□□ 1.84
PDPK1-212ENST00000491073 URB2Q14146 1524 aaKnown RBP26.54■■□□□ 1.84
PDPK1-212ENST00000491073 POLA1P09884 1462 aaPredicted RBP26.53■■□□□ 1.84
PDPK1-212ENST00000491073 VPS8Q8N3P4 1428 aa26.48■■□□□ 1.83
PDPK1-212ENST00000491073 KIF21AQ7Z4S6 1674 aa26.45■■□□□ 1.82
PDPK1-212ENST00000491073 ARAP1Q96P48 1450 aa26.43■■□□□ 1.82
PDPK1-212ENST00000491073 ABCA10Q8WWZ4 1543 aa26.42■■□□□ 1.82
PDPK1-212ENST00000491073 CARMIL1Q5VZK9 1371 aa26.41■■□□□ 1.82
PDPK1-212ENST00000491073 PDS5BQ9NTI5 1447 aa26.4■■□□□ 1.82
PDPK1-212ENST00000491073 ARHGAP35Q9NRY4 1499 aa26.31■■□□□ 1.8
PDPK1-212ENST00000491073 WDR97A6NE52 1622 aa26.3■■□□□ 1.8
PDPK1-212ENST00000491073 TDRD9Q8NDG6 1382 aaKnown RBP26.26■■□□□ 1.79
PDPK1-212ENST00000491073 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.21■■□□□ 1.79
PDPK1-212ENST00000491073 ABCA5Q8WWZ7 1642 aa26.18■■□□□ 1.78
PDPK1-212ENST00000491073 TARBP1Q13395 1621 aaKnown RBP26.16■■□□□ 1.78
PDPK1-212ENST00000491073 KANK4Q5T7N3 995 aaPredicted RBP26.16■■□□□ 1.78
PDPK1-212ENST00000491073 APLP2Q06481 763 aa26.12■■□□□ 1.77
PDPK1-212ENST00000491073 GAPVD1Q14C86 1478 aa26.12■■□□□ 1.77
PDPK1-212ENST00000491073 CUL7Q14999 1698 aa26.11■■□□□ 1.77
PDPK1-212ENST00000491073 MRC2Q9UBG0 1479 aa26.08■■□□□ 1.77
PDPK1-212ENST00000491073 ZEB1P37275 1124 aaPredicted RBP26.06■■□□□ 1.76
PDPK1-212ENST00000491073 P3H3Q8IVL6 736 aa26.05■■□□□ 1.76
PDPK1-212ENST00000491073 AQRO60306 1485 aaKnown RBP eCLIP26.01■■□□□ 1.753e-6■■■■□ 25.5
PDPK1-212ENST00000491073 HNRNPUL2Q1KMD3 747 aaKnown RBP26■■□□□ 1.75
PDPK1-212ENST00000491073 CCER1Q8TC90 406 aaPredicted RBP25.99■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms