RNA–Protein interactions for RNA: ENST00000490893.5

ZNF561-218, Transcript of zinc finger protein 561, humanhuman

TSL 3

Gene ZNF561, Length 728 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF561-218ENST00000490893 NISCHQ9Y2I1 1504 aa17.15■□□□□ 0.34
ZNF561-218ENST00000490893 AEBP2Q6ZN18 517 aaPredicted RBP16.24■□□□□ 0.19
ZNF561-218ENST00000490893 DNAJC5BQ9UF47 199 aa15.29■□□□□ 0.04
ZNF561-218ENST00000490893 CHIC1Q5VXU3 224 aa15.21■□□□□ 0.03
ZNF561-218ENST00000490893 CCDC180Q9P1Z9 1646 aa15.19■□□□□ 0.02
ZNF561-218ENST00000490893 ABCC9O60706 1549 aa15.06■□□□□ 0
ZNF561-218ENST00000490893 DNAJC5Q9H3Z4 198 aa14.77□□□□□ -0.05
ZNF561-218ENST00000490893 ZCCHC6Q5VYS8 1495 aaKnown RBP14.42□□□□□ -0.1
ZNF561-218ENST00000490893 DCAF1Q9Y4B6 1507 aa14.26□□□□□ -0.13
ZNF561-218ENST00000490893 MYO15BQ96JP2 1530 aa14.17□□□□□ -0.14
ZNF561-218ENST00000490893 NACADO15069 1562 aa14.12□□□□□ -0.15
ZNF561-218ENST00000490893 RB1CC1Q8TDY2 1594 aa14.05□□□□□ -0.16
ZNF561-218ENST00000490893 DCAF8L2P0C7V8 631 aa14.03□□□□□ -0.16
ZNF561-218ENST00000490893 SENP3Q9H4L4 574 aaPredicted RBP13.93□□□□□ -0.18
ZNF561-218ENST00000490893 PABPN1Q86U42 306 aaKnown RBP eCLIP13.89□□□□□ -0.19
ZNF561-218ENST00000490893 SCRIBQ14160 1630 aa13.82□□□□□ -0.2
ZNF561-218ENST00000490893 SHROOM4Q9ULL8 1493 aa13.74□□□□□ -0.21
ZNF561-218ENST00000490893 UNC13AQ9UPW8 1703 aa13.7□□□□□ -0.22
ZNF561-218ENST00000490893 PHF23Q9BUL5 403 aaPredicted RBP13.7□□□□□ -0.22
ZNF561-218ENST00000490893 TRIM41Q8WV44 630 aa13.67□□□□□ -0.22
ZNF561-218ENST00000490893 CECR2Q9BXF3 1484 aa13.65□□□□□ -0.22
ZNF561-218ENST00000490893 CC2D2AQ9P2K1 1620 aa13.51□□□□□ -0.25
ZNF561-218ENST00000490893 BICRAQ9NZM4 1560 aa13.51□□□□□ -0.25
ZNF561-218ENST00000490893 CUX2O14529 1486 aa13.36□□□□□ -0.27
ZNF561-218ENST00000490893 BAZ1AQ9NRL2 1556 aaPredicted RBP13.32□□□□□ -0.28
ZNF561-218ENST00000490893 SMARCA4P51532 1647 aa13.27□□□□□ -0.29
ZNF561-218ENST00000490893 MROH2BQ7Z745 1585 aa13.19□□□□□ -0.3
ZNF561-218ENST00000490893 EIF4G1Q04637 1599 aaKnown RBP13.18□□□□□ -0.3
ZNF561-218ENST00000490893 RSF1Q96T23 1441 aaPredicted RBP13.17□□□□□ -0.3
ZNF561-218ENST00000490893 PEG3Q9GZU2 1588 aa13.13□□□□□ -0.31
ZNF561-218ENST00000490893 SMARCA2P51531 1590 aa13.12□□□□□ -0.31
ZNF561-218ENST00000490893 SUPT5HO00267 1087 aaKnown RBP13.11□□□□□ -0.31
ZNF561-218ENST00000490893 WIZO95785 1651 aa13.09□□□□□ -0.31
ZNF561-218ENST00000490893 TOP2AP11388 1531 aaKnown RBP13.05□□□□□ -0.32
ZNF561-218ENST00000490893 ATAD2BQ9ULI0 1458 aa13.03□□□□□ -0.32
ZNF561-218ENST00000490893 HMGXB3Q12766 1538 aa13.03□□□□□ -0.32
ZNF561-218ENST00000490893 ERCC6Q03468 1493 aa13.02□□□□□ -0.33
ZNF561-218ENST00000490893 BAZ1BQ9UIG0 1483 aaKnown RBP13.01□□□□□ -0.33
ZNF561-218ENST00000490893 FOXD1Q16676 465 aa12.98□□□□□ -0.33
ZNF561-218ENST00000490893 NCAPD3P42695 1498 aa12.94□□□□□ -0.34
ZNF561-218ENST00000490893 ILDR1Q86SU0 546 aaPredicted RBP12.9□□□□□ -0.34
ZNF561-218ENST00000490893 CCDC88BA6NC98 1476 aa12.79□□□□□ -0.36
ZNF561-218ENST00000490893 PRDM2Q13029 1718 aa12.71□□□□□ -0.37
ZNF561-218ENST00000490893 THOC2Q8NI27 1593 aaKnown RBP12.68□□□□□ -0.38
ZNF561-218ENST00000490893 TRHP20396 242 aaPredicted RBP12.65□□□□□ -0.38
ZNF561-218ENST00000490893 NESP48681 1621 aa12.64□□□□□ -0.39
ZNF561-218ENST00000490893 LAMC3Q9Y6N6 1575 aa12.63□□□□□ -0.39
ZNF561-218ENST00000490893 CFTRP13569 1480 aa12.62□□□□□ -0.39
ZNF561-218ENST00000490893 RIMBP3CA6NJZ7 1639 aa12.59□□□□□ -0.39
ZNF561-218ENST00000490893 RIMBP3BA6NNM3 1639 aa12.59□□□□□ -0.39
ZNF561-218ENST00000490893 RIMBP3Q9UFD9 1639 aa12.59□□□□□ -0.39
ZNF561-218ENST00000490893 OSCARQ8IYS5 282 aa12.59□□□□□ -0.39
ZNF561-218ENST00000490893 CADPSQ9ULU8 1353 aa12.58□□□□□ -0.4
ZNF561-218ENST00000490893 ABCC8Q09428 1581 aa12.49□□□□□ -0.41
ZNF561-218ENST00000490893 PDS5BQ9NTI5 1447 aa12.49□□□□□ -0.41
ZNF561-218ENST00000490893 FANCD2Q9BXW9 1451 aa12.48□□□□□ -0.41
ZNF561-218ENST00000490893 CEP164Q9UPV0 1460 aa12.48□□□□□ -0.41
ZNF561-218ENST00000490893 WRNQ14191 1432 aaPredicted RBP eCLIP12.47□□□□□ -0.41
ZNF561-218ENST00000490893 BIVM-ERCC5R4GMW8 1640 aa12.45□□□□□ -0.42
ZNF561-218ENST00000490893 KIF21AQ7Z4S6 1674 aa12.45□□□□□ -0.42
ZNF561-218ENST00000490893 CYB5RLQ6IPT4 315 aa12.44□□□□□ -0.42
ZNF561-218ENST00000490893 TOP2BQ02880 1626 aa12.43□□□□□ -0.42
ZNF561-218ENST00000490893 ARHGEF11O15085 1522 aa12.42□□□□□ -0.42
ZNF561-218ENST00000490893 SYNJ1O43426 1573 aa12.42□□□□□ -0.42
ZNF561-218ENST00000490893 DNMBPQ6XZF7 1577 aa12.41□□□□□ -0.42
ZNF561-218ENST00000490893 POTEDQ86YR6 584 aa12.39□□□□□ -0.43
ZNF561-218ENST00000490893 CUX1P39880 1505 aa12.38□□□□□ -0.43
ZNF561-218ENST00000490893 MRC2Q9UBG0 1479 aa12.36□□□□□ -0.43
ZNF561-218ENST00000490893 TOPBP1Q92547 1522 aa12.33□□□□□ -0.44
ZNF561-218ENST00000490893 WDR62O43379 1518 aa12.31□□□□□ -0.44
ZNF561-218ENST00000490893 URB2Q14146 1524 aaKnown RBP12.31□□□□□ -0.44
ZNF561-218ENST00000490893 FGD5Q6ZNL6 1462 aa12.29□□□□□ -0.44
ZNF561-218ENST00000490893 EEA1Q15075 1411 aa12.28□□□□□ -0.44
ZNF561-218ENST00000490893 MSH5O43196 834 aa12.27□□□□□ -0.45
ZNF561-218ENST00000490893 POLA1P09884 1462 aaPredicted RBP12.25□□□□□ -0.45
ZNF561-218ENST00000490893 ARAP1Q96P48 1450 aa12.25□□□□□ -0.45
ZNF561-218ENST00000490893 WDR97A6NE52 1622 aa12.24□□□□□ -0.45
ZNF561-218ENST00000490893 ABCA10Q8WWZ4 1543 aa12.21□□□□□ -0.46
ZNF561-218ENST00000490893 KIF27Q86VH2 1401 aa12.2□□□□□ -0.46
ZNF561-218ENST00000490893 IFT140Q96RY7 1462 aa12.18□□□□□ -0.46
ZNF561-218ENST00000490893 SOGA1O94964 1423 aa12.17□□□□□ -0.46
ZNF561-218ENST00000490893 TARBP1Q13395 1621 aaKnown RBP12.16□□□□□ -0.46
ZNF561-218ENST00000490893 ABCA5Q8WWZ7 1642 aa12.15□□□□□ -0.46
ZNF561-218ENST00000490893 RAD54L2Q9Y4B4 1467 aa12.14□□□□□ -0.47
ZNF561-218ENST00000490893 KIF21BO75037 1637 aa12.13□□□□□ -0.47
ZNF561-218ENST00000490893 CUL7Q14999 1698 aa12.12□□□□□ -0.47
ZNF561-218ENST00000490893 PBRM1Q86U86 1689 aa12.11□□□□□ -0.47
ZNF561-218ENST00000490893 PIAS4Q8N2W9 510 aaPredicted RBP12.11□□□□□ -0.47
ZNF561-218ENST00000490893 ERICH3Q5RHP9 1530 aa12.1□□□□□ -0.47
ZNF561-218ENST00000490893 EIF4G3O43432 1585 aaKnown RBP12.09□□□□□ -0.47
ZNF561-218ENST00000490893 KDM4FA0A1W2PPD8 638 aa12.09□□□□□ -0.47
ZNF561-218ENST00000490893 LMTK3Q96Q04 1460 aa12.08□□□□□ -0.47
ZNF561-218ENST00000490893 RUSC2Q8N2Y8 1516 aa12.08□□□□□ -0.48
ZNF561-218ENST00000490893 FAM9AQ8IZU1 332 aaPredicted RBP12.08□□□□□ -0.48
ZNF561-218ENST00000490893 GOLGA3Q08378 1498 aa12.08□□□□□ -0.48
ZNF561-218ENST00000490893 GAPVD1Q14C86 1478 aa12.08□□□□□ -0.48
ZNF561-218ENST00000490893 SOCS7O14512 581 aa12.06□□□□□ -0.48
ZNF561-218ENST00000490893 CSRNP3Q8WYN3 585 aa12.05□□□□□ -0.48
ZNF561-218ENST00000490893 PLPPR3Q6T4P5 718 aa12.04□□□□□ -0.48
ZNF561-218ENST00000490893 ILDR2Q71H61 639 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms